RNA–Protein interactions for RNA: ENST00000436172.1

CUL3-206, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-206ENST00000436172 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
CUL3-206ENST00000436172 EMILIN3Q9NT22 766 aa8.6□□□□□ -1.03
CUL3-206ENST00000436172 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
CUL3-206ENST00000436172 ITGBL1O95965 494 aaPredicted RBP8.58□□□□□ -1.04
CUL3-206ENST00000436172 EPAS1Q99814 870 aa8.57□□□□□ -1.04
CUL3-206ENST00000436172 PROX2Q3B8N5 592 aa8.56□□□□□ -1.04
CUL3-206ENST00000436172 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
CUL3-206ENST00000436172 COL9A1P20849 921 aa8.55□□□□□ -1.04
CUL3-206ENST00000436172 CAMK2BQ13554 666 aa8.54□□□□□ -1.04
CUL3-206ENST00000436172 ZFRQ96KR1 1074 aaKnown RBP8.53□□□□□ -1.04
CUL3-206ENST00000436172 KIAA1468Q9P260 1216 aa8.53□□□□□ -1.04
CUL3-206ENST00000436172 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.05
CUL3-206ENST00000436172 BCAMP50895 628 aa8.51□□□□□ -1.05
CUL3-206ENST00000436172 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
CUL3-206ENST00000436172 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
CUL3-206ENST00000436172 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
CUL3-206ENST00000436172 KCNC4Q03721 635 aa8.49□□□□□ -1.05
CUL3-206ENST00000436172 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
CUL3-206ENST00000436172 DPYSL4O14531 572 aa8.47□□□□□ -1.05
CUL3-206ENST00000436172 TSR3Q9UJK0 312 aaKnown RBP8.47□□□□□ -1.05
CUL3-206ENST00000436172 LRCH3Q96II8 777 aa8.46□□□□□ -1.06
CUL3-206ENST00000436172 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
CUL3-206ENST00000436172 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
CUL3-206ENST00000436172 SEPT9Q9UHD8 586 aaPredicted RBP8.45□□□□□ -1.06
CUL3-206ENST00000436172 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
CUL3-206ENST00000436172 EN1Q05925 392 aaPredicted RBP8.42□□□□□ -1.06
CUL3-206ENST00000436172 LAPTM4AQ15012 233 aa8.42□□□□□ -1.06
CUL3-206ENST00000436172 RBM33Q96EV2 1170 aaKnown RBP8.42□□□□□ -1.06
CUL3-206ENST00000436172 HPS5Q9UPZ3 1129 aa8.42□□□□□ -1.06
CUL3-206ENST00000436172 PDIA6Q15084 440 aa8.41□□□□□ -1.06
CUL3-206ENST00000436172 DDX12PQ92771 950 aa8.41□□□□□ -1.06
CUL3-206ENST00000436172 SPDYE16A6NNV3 312 aaPredicted RBP8.4□□□□□ -1.06
CUL3-206ENST00000436172 MAP3K7O43318 606 aa8.39□□□□□ -1.07
CUL3-206ENST00000436172 NBR1Q14596 966 aa8.39□□□□□ -1.07
CUL3-206ENST00000436172 Q6ZNB5 142 aa8.39□□□□□ -1.07
CUL3-206ENST00000436172 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
CUL3-206ENST00000436172 PPP4CP60510 307 aa8.38□□□□□ -1.07
CUL3-206ENST00000436172 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
CUL3-206ENST00000436172 BBXQ8WY36 941 aaPredicted RBP8.36□□□□□ -1.07
CUL3-206ENST00000436172 PRSS12P56730 875 aa8.35□□□□□ -1.07
CUL3-206ENST00000436172 TSR1Q2NL82 804 aaKnown RBP8.35□□□□□ -1.07
CUL3-206ENST00000436172 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
CUL3-206ENST00000436172 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
CUL3-206ENST00000436172 ARIH1Q9Y4X5 557 aaPredicted RBP8.33□□□□□ -1.08
CUL3-206ENST00000436172 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
CUL3-206ENST00000436172 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
CUL3-206ENST00000436172 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
CUL3-206ENST00000436172 IL21Q9HBE4 155 aa8.31□□□□□ -1.08
CUL3-206ENST00000436172 RBM27Q9P2N5 1060 aaKnown RBP8.31□□□□□ -1.08
CUL3-206ENST00000436172 HDGFP51858 240 aaKnown RBP8.3□□□□□ -1.08
CUL3-206ENST00000436172 E2F4Q16254 413 aa8.3□□□□□ -1.08
CUL3-206ENST00000436172 TATDN2Q93075 761 aa8.3□□□□□ -1.08
CUL3-206ENST00000436172 GFRA3O60609 400 aa8.28□□□□□ -1.08
CUL3-206ENST00000436172 MTRQ99707 1265 aa8.28□□□□□ -1.08
CUL3-206ENST00000436172 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
CUL3-206ENST00000436172 SPRYD3Q8NCJ5 442 aa8.27□□□□□ -1.09
CUL3-206ENST00000436172 PNMA3Q9UL41 463 aa8.27□□□□□ -1.09
CUL3-206ENST00000436172 SMAPO00193 183 aa8.26□□□□□ -1.09
CUL3-206ENST00000436172 NRG2O14511 850 aaPredicted RBP8.26□□□□□ -1.09
CUL3-206ENST00000436172 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
CUL3-206ENST00000436172 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
CUL3-206ENST00000436172 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
CUL3-206ENST00000436172 FAM198AQ9UFP1 575 aa8.26□□□□□ -1.09
CUL3-206ENST00000436172 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
CUL3-206ENST00000436172 WDR70Q9NW82 654 aa8.25□□□□□ -1.09
CUL3-206ENST00000436172 PPP1R18Q6NYC8 613 aa8.24□□□□□ -1.09
CUL3-206ENST00000436172 GGCXP38435 758 aa8.23□□□□□ -1.09
CUL3-206ENST00000436172 SLC4A3P48751 1232 aa8.23□□□□□ -1.09
CUL3-206ENST00000436172 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
CUL3-206ENST00000436172 NUDT18Q6ZVK8 323 aa8.23□□□□□ -1.09
CUL3-206ENST00000436172 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.23□□□□□ -1.09
CUL3-206ENST00000436172 OSBPP22059 807 aa8.22□□□□□ -1.09
CUL3-206ENST00000436172 SLF2Q8IX21 1173 aa8.22□□□□□ -1.09
CUL3-206ENST00000436172 RNF40O75150 1001 aa8.21□□□□□ -1.1
CUL3-206ENST00000436172 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
CUL3-206ENST00000436172 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
CUL3-206ENST00000436172 APLP1P51693 650 aa8.2□□□□□ -1.1
CUL3-206ENST00000436172 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
CUL3-206ENST00000436172 PRR14Q9BWN1 585 aa8.2□□□□□ -1.1
CUL3-206ENST00000436172 LCE2BO14633 110 aa8.19□□□□□ -1.1
CUL3-206ENST00000436172 CDHR5Q9HBB8 845 aa8.19□□□□□ -1.1
CUL3-206ENST00000436172 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
CUL3-206ENST00000436172 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
CUL3-206ENST00000436172 PADI6Q6TGC4 694 aa8.15□□□□□ -1.1
CUL3-206ENST00000436172 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
CUL3-206ENST00000436172 NPDC1Q9NQX5 325 aaPredicted RBP8.14□□□□□ -1.11
CUL3-206ENST00000436172 COPS2P61201 443 aa8.13□□□□□ -1.11
CUL3-206ENST00000436172 NKX2-3Q8TAU0 364 aa8.13□□□□□ -1.11
CUL3-206ENST00000436172 EYA1Q99502 592 aa8.13□□□□□ -1.11
CUL3-206ENST00000436172 ZPR1O75312 459 aa8.12□□□□□ -1.11
CUL3-206ENST00000436172 PCDHB3Q9Y5E6 796 aa8.11□□□□□ -1.11
CUL3-206ENST00000436172 PAXIP1Q6ZW49 1069 aaPredicted RBP8.1□□□□□ -1.11
CUL3-206ENST00000436172 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
CUL3-206ENST00000436172 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
CUL3-206ENST00000436172 DNAJB2P25686 324 aa8.08□□□□□ -1.12
CUL3-206ENST00000436172 SLC19A1P41440 591 aa8.07□□□□□ -1.12
CUL3-206ENST00000436172 RBM46Q8TBY0 533 aaKnown RBP8.07□□□□□ -1.12
CUL3-206ENST00000436172 ARHGEF1Q92888 912 aaKnown RBP8.07□□□□□ -1.12
CUL3-206ENST00000436172 KMT5BQ4FZB7 885 aa8.06□□□□□ -1.12
CUL3-206ENST00000436172 AMER1Q5JTC6 1135 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms