RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 ABCC10Q5T3U5 1492 aa19.96■□□□□ 0.79
CACTIN-203ENST00000429344 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
CACTIN-203ENST00000429344 USP47Q96K76 1375 aa19.96■□□□□ 0.79
CACTIN-203ENST00000429344 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
CACTIN-203ENST00000429344 ST20-MTHFSA0A0A6YYL1 179 aa19.95■□□□□ 0.78
CACTIN-203ENST00000429344 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
CACTIN-203ENST00000429344 PZPP20742 1482 aa19.94■□□□□ 0.78
CACTIN-203ENST00000429344 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
CACTIN-203ENST00000429344 SYCP2Q9BX26 1530 aa19.93■□□□□ 0.78
CACTIN-203ENST00000429344 GGT6Q6P531 493 aa19.91■□□□□ 0.78
CACTIN-203ENST00000429344 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
CACTIN-203ENST00000429344 IPO9Q96P70 1041 aaKnown RBP19.9■□□□□ 0.78
CACTIN-203ENST00000429344 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.78
CACTIN-203ENST00000429344 EXOC6Q8TAG9 804 aa19.89■□□□□ 0.78
CACTIN-203ENST00000429344 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
CACTIN-203ENST00000429344 SKAP1Q86WV1 359 aa19.88■□□□□ 0.77
CACTIN-203ENST00000429344 ADGRL2O95490 1459 aa19.87■□□□□ 0.77
CACTIN-203ENST00000429344 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
CACTIN-203ENST00000429344 PLIN1O60240 522 aa19.85■□□□□ 0.77
CACTIN-203ENST00000429344 MBD5Q9P267 1494 aa19.85■□□□□ 0.77
CACTIN-203ENST00000429344 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
CACTIN-203ENST00000429344 SCAPERQ9BY12 1400 aa19.84■□□□□ 0.77
CACTIN-203ENST00000429344 KANK1Q14678 1352 aa19.84■□□□□ 0.77
CACTIN-203ENST00000429344 CDC42BPAQ5VT25 1732 aa19.83■□□□□ 0.77
CACTIN-203ENST00000429344 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.76
CACTIN-203ENST00000429344 PLCH2O75038 1416 aa19.83■□□□□ 0.76
CACTIN-203ENST00000429344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.76
CACTIN-203ENST00000429344 EIF5BO60841 1220 aaKnown RBP19.82■□□□□ 0.76
CACTIN-203ENST00000429344 NEFMP07197 916 aa19.82■□□□□ 0.76
CACTIN-203ENST00000429344 SHANK2Q9UPX8 1470 aa19.82■□□□□ 0.76
CACTIN-203ENST00000429344 TRAPPC8Q9Y2L5 1435 aa19.82■□□□□ 0.76
CACTIN-203ENST00000429344 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
CACTIN-203ENST00000429344 TTC37Q6PGP7 1564 aa19.8■□□□□ 0.76
CACTIN-203ENST00000429344 TEX14Q8IWB6 1497 aa19.8■□□□□ 0.76
CACTIN-203ENST00000429344 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
CACTIN-203ENST00000429344 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
CACTIN-203ENST00000429344 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
CACTIN-203ENST00000429344 RCAN3Q9UKA8 241 aa19.79■□□□□ 0.76
CACTIN-203ENST00000429344 CDCA7LQ96GN5 454 aa19.77■□□□□ 0.76
CACTIN-203ENST00000429344 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.75
CACTIN-203ENST00000429344 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
CACTIN-203ENST00000429344 ADGBQ8N7X0 1667 aa19.76■□□□□ 0.75
CACTIN-203ENST00000429344 RRP1P56182 461 aaKnown RBP19.75■□□□□ 0.75
CACTIN-203ENST00000429344 SLC4A3P48751 1232 aa19.75■□□□□ 0.75
CACTIN-203ENST00000429344 IL27Q8NEV9 243 aa19.74■□□□□ 0.75
CACTIN-203ENST00000429344 FANCAO15360 1455 aa19.74■□□□□ 0.75
CACTIN-203ENST00000429344 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
CACTIN-203ENST00000429344 PDE4AP27815 886 aa19.73■□□□□ 0.75
CACTIN-203ENST00000429344 ASXL2Q76L83 1435 aa19.73■□□□□ 0.75
CACTIN-203ENST00000429344 RAPGEF3O95398 923 aa19.72■□□□□ 0.75
CACTIN-203ENST00000429344 TMF1P82094 1093 aa19.71■□□□□ 0.75
CACTIN-203ENST00000429344 WDR7Q9Y4E6 1490 aa19.71■□□□□ 0.75
CACTIN-203ENST00000429344 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.71■□□□□ 0.75
CACTIN-203ENST00000429344 ADGRL1O94910 1474 aa19.71■□□□□ 0.75
CACTIN-203ENST00000429344 PREX2Q70Z35 1606 aa19.7■□□□□ 0.74
CACTIN-203ENST00000429344 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
CACTIN-203ENST00000429344 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
CACTIN-203ENST00000429344 WASHC2CQ9Y4E1 1318 aa19.69■□□□□ 0.74
CACTIN-203ENST00000429344 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
CACTIN-203ENST00000429344 ARHGEF12Q9NZN5 1544 aa19.68■□□□□ 0.74
CACTIN-203ENST00000429344 ZCCHC11Q5TAX3 1644 aaKnown RBP19.67■□□□□ 0.74
CACTIN-203ENST00000429344 CDC42BPBQ9Y5S2 1711 aa19.66■□□□□ 0.74
CACTIN-203ENST00000429344 MYBBP1AQ9BQG0 1328 aaKnown RBP19.66■□□□□ 0.74
CACTIN-203ENST00000429344 STAG3Q9UJ98 1225 aa19.65■□□□□ 0.74
CACTIN-203ENST00000429344 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
CACTIN-203ENST00000429344 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
CACTIN-203ENST00000429344 CLASP1Q7Z460 1538 aa19.65■□□□□ 0.74
CACTIN-203ENST00000429344 MYO5CQ9NQX4 1742 aa19.64■□□□□ 0.74
CACTIN-203ENST00000429344 SPATA31E1Q6ZUB1 1445 aa19.64■□□□□ 0.73
CACTIN-203ENST00000429344 MLECQ14165 292 aa19.64■□□□□ 0.73
CACTIN-203ENST00000429344 CRBNQ96SW2 442 aa19.64■□□□□ 0.73
CACTIN-203ENST00000429344 CROCC2H7BZ55 1655 aa19.64■□□□□ 0.73
CACTIN-203ENST00000429344 DUOX2Q9NRD8 1548 aa19.63■□□□□ 0.73
CACTIN-203ENST00000429344 TCERG1O14776 1098 aaKnown RBP19.63■□□□□ 0.73
CACTIN-203ENST00000429344 RGS3P49796 1198 aa19.63■□□□□ 0.73
CACTIN-203ENST00000429344 UHRF1BP1LA0JNW5 1464 aa19.63■□□□□ 0.73
CACTIN-203ENST00000429344 PANK3Q9H999 370 aa19.62■□□□□ 0.73
CACTIN-203ENST00000429344 KNSTRNQ9Y448 316 aa19.62■□□□□ 0.73
CACTIN-203ENST00000429344 FAM69CQ0P6D2 419 aa19.61■□□□□ 0.73
CACTIN-203ENST00000429344 RALBP1Q15311 655 aa19.6■□□□□ 0.73
CACTIN-203ENST00000429344 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
CACTIN-203ENST00000429344 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
CACTIN-203ENST00000429344 ERBINQ96RT1 1412 aa19.59■□□□□ 0.73
CACTIN-203ENST00000429344 CFAP70Q5T0N1 1121 aa19.59■□□□□ 0.73
CACTIN-203ENST00000429344 KTN1Q86UP2 1357 aaKnown RBP19.58■□□□□ 0.73
CACTIN-203ENST00000429344 SAFB2Q14151 953 aaKnown RBP eCLIP19.57■□□□□ 0.72
CACTIN-203ENST00000429344 RALGAPBQ86X10 1494 aa19.57■□□□□ 0.72
CACTIN-203ENST00000429344 ARID4BQ4LE39 1312 aaPredicted RBP19.57■□□□□ 0.72
CACTIN-203ENST00000429344 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
CACTIN-203ENST00000429344 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
CACTIN-203ENST00000429344 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
CACTIN-203ENST00000429344 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
CACTIN-203ENST00000429344 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
CACTIN-203ENST00000429344 RNF123Q5XPI4 1314 aa19.55■□□□□ 0.72
CACTIN-203ENST00000429344 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
CACTIN-203ENST00000429344 ABCC1P33527 1531 aa19.53■□□□□ 0.72
CACTIN-203ENST00000429344 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.72
CACTIN-203ENST00000429344 ARXQ96QS3 562 aa19.52■□□□□ 0.72
CACTIN-203ENST00000429344 PLA2R1Q13018 1463 aa19.52■□□□□ 0.72
CACTIN-203ENST00000429344 STK26Q9P289 416 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms