RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
SNX13-203ENST00000428135 IFT140Q96RY7 1462 aa12.35□□□□□ -0.43
SNX13-203ENST00000428135 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
SNX13-203ENST00000428135 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
SNX13-203ENST00000428135 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
SNX13-203ENST00000428135 NOL8Q76FK4 1167 aaKnown RBP12.34□□□□□ -0.43
SNX13-203ENST00000428135 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
SNX13-203ENST00000428135 TMX4Q9H1E5 349 aaPredicted RBP12.34□□□□□ -0.43
SNX13-203ENST00000428135 GNL2Q13823 731 aaKnown RBP12.34□□□□□ -0.43
SNX13-203ENST00000428135 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.43
SNX13-203ENST00000428135 BCL2L13Q9BXK5 485 aa12.33□□□□□ -0.43
SNX13-203ENST00000428135 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
SNX13-203ENST00000428135 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
SNX13-203ENST00000428135 ST20-MTHFSA0A0A6YYL1 179 aa12.33□□□□□ -0.44
SNX13-203ENST00000428135 HSCBQ8IWL3 235 aa12.33□□□□□ -0.44
SNX13-203ENST00000428135 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
SNX13-203ENST00000428135 RCAN3Q9UKA8 241 aa12.32□□□□□ -0.44
SNX13-203ENST00000428135 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
SNX13-203ENST00000428135 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
SNX13-203ENST00000428135 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
SNX13-203ENST00000428135 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
SNX13-203ENST00000428135 PANK3Q9H999 370 aa12.31□□□□□ -0.44
SNX13-203ENST00000428135 MCCP23508 829 aa12.3□□□□□ -0.44
SNX13-203ENST00000428135 TCERG1O14776 1098 aaKnown RBP12.3□□□□□ -0.44
SNX13-203ENST00000428135 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
SNX13-203ENST00000428135 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
SNX13-203ENST00000428135 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
SNX13-203ENST00000428135 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
SNX13-203ENST00000428135 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
SNX13-203ENST00000428135 EIF2S2P20042 333 aaKnown RBP12.28□□□□□ -0.44
SNX13-203ENST00000428135 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
SNX13-203ENST00000428135 MFAP1P55081 439 aaKnown RBP12.27□□□□□ -0.44
SNX13-203ENST00000428135 TOMM22Q9NS69 142 aa12.27□□□□□ -0.44
SNX13-203ENST00000428135 USP35Q9P2H5 1018 aa12.27□□□□□ -0.44
SNX13-203ENST00000428135 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.44
SNX13-203ENST00000428135 ATF3P18847 181 aa12.27□□□□□ -0.44
SNX13-203ENST00000428135 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.44
SNX13-203ENST00000428135 PSME1Q06323 249 aa12.27□□□□□ -0.44
SNX13-203ENST00000428135 RALBP1Q15311 655 aa12.27□□□□□ -0.45
SNX13-203ENST00000428135 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.45
SNX13-203ENST00000428135 SYNJ1O43426 1573 aa12.27□□□□□ -0.45
SNX13-203ENST00000428135 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
SNX13-203ENST00000428135 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
SNX13-203ENST00000428135 CCDC144AA2RUR9 1427 aa12.26□□□□□ -0.45
SNX13-203ENST00000428135 ERICH6BQ5W0A0 696 aa12.26□□□□□ -0.45
SNX13-203ENST00000428135 COG3Q96JB2 828 aa12.26□□□□□ -0.45
SNX13-203ENST00000428135 CUX1P39880 1505 aa12.26□□□□□ -0.45
SNX13-203ENST00000428135 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
SNX13-203ENST00000428135 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
SNX13-203ENST00000428135 HSP90B1P14625 803 aaKnown RBP12.25□□□□□ -0.45
SNX13-203ENST00000428135 PLIN1O60240 522 aa12.25□□□□□ -0.45
SNX13-203ENST00000428135 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
SNX13-203ENST00000428135 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
SNX13-203ENST00000428135 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
SNX13-203ENST00000428135 SCAPERQ9BY12 1400 aa12.25□□□□□ -0.45
SNX13-203ENST00000428135 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
SNX13-203ENST00000428135 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
SNX13-203ENST00000428135 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
SNX13-203ENST00000428135 ANP32EQ9BTT0 268 aa12.24□□□□□ -0.45
SNX13-203ENST00000428135 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
SNX13-203ENST00000428135 DRC7Q8IY82 874 aa12.24□□□□□ -0.45
SNX13-203ENST00000428135 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
SNX13-203ENST00000428135 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
SNX13-203ENST00000428135 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
SNX13-203ENST00000428135 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
SNX13-203ENST00000428135 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
SNX13-203ENST00000428135 SYNJ2O15056 1496 aa12.22□□□□□ -0.45
SNX13-203ENST00000428135 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
SNX13-203ENST00000428135 PDE4CQ08493 712 aa12.22□□□□□ -0.45
SNX13-203ENST00000428135 KIF15Q9NS87 1388 aa12.22□□□□□ -0.45
SNX13-203ENST00000428135 RAD21O60216 631 aa12.21□□□□□ -0.45
SNX13-203ENST00000428135 CENPJQ9HC77 1338 aaPredicted RBP12.21□□□□□ -0.45
SNX13-203ENST00000428135 NAP1L5Q96NT1 182 aaPredicted RBP12.21□□□□□ -0.46
SNX13-203ENST00000428135 TEFQ10587 303 aa12.2□□□□□ -0.46
SNX13-203ENST00000428135 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
SNX13-203ENST00000428135 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
SNX13-203ENST00000428135 VPS53Q5VIR6 699 aa12.2□□□□□ -0.46
SNX13-203ENST00000428135 CREBRFQ8IUR6 639 aa12.2□□□□□ -0.46
SNX13-203ENST00000428135 EVC2Q86UK5 1308 aa12.2□□□□□ -0.46
SNX13-203ENST00000428135 HMOX1P09601 288 aa12.19□□□□□ -0.46
SNX13-203ENST00000428135 RILPL2Q969X0 211 aa12.19□□□□□ -0.46
SNX13-203ENST00000428135 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
SNX13-203ENST00000428135 NLRP13Q86W25 1043 aa12.19□□□□□ -0.46
SNX13-203ENST00000428135 PMFBP1Q8TBY8 1022 aa12.18□□□□□ -0.46
SNX13-203ENST00000428135 GPATCH3Q96I76 525 aa12.18□□□□□ -0.46
SNX13-203ENST00000428135 XPCQ01831 940 aaPredicted RBP12.18□□□□□ -0.46
SNX13-203ENST00000428135 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
SNX13-203ENST00000428135 GOLGA6L6A8MZA4 724 aa12.18□□□□□ -0.46
SNX13-203ENST00000428135 TTC5Q8N0Z6 440 aa12.18□□□□□ -0.46
SNX13-203ENST00000428135 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
SNX13-203ENST00000428135 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
SNX13-203ENST00000428135 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
SNX13-203ENST00000428135 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
SNX13-203ENST00000428135 CGNL1Q0VF96 1302 aa12.16□□□□□ -0.46
SNX13-203ENST00000428135 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
SNX13-203ENST00000428135 HMMRO75330 724 aa12.16□□□□□ -0.46
SNX13-203ENST00000428135 APAF1O14727 1248 aa12.16□□□□□ -0.46
SNX13-203ENST00000428135 LAMC3Q9Y6N6 1575 aa12.16□□□□□ -0.46
SNX13-203ENST00000428135 RASSF8Q8NHQ8 419 aa12.15□□□□□ -0.46
SNX13-203ENST00000428135 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms