RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CREBRFQ8IUR6 639 aa22.37■■□□□ 1.17
ARHGEF28-203ENST00000426542 LMOD3Q0VAK6 560 aa22.37■■□□□ 1.17
ARHGEF28-203ENST00000426542 NUTM2FA1L443 756 aa22.35■■□□□ 1.17
ARHGEF28-203ENST00000426542 TOMM22Q9NS69 142 aa22.35■■□□□ 1.17
ARHGEF28-203ENST00000426542 L3MBTL2Q969R5 705 aa22.35■■□□□ 1.17
ARHGEF28-203ENST00000426542 PDE4CQ08493 712 aa22.35■■□□□ 1.17
ARHGEF28-203ENST00000426542 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
ARHGEF28-203ENST00000426542 WASHC2CQ9Y4E1 1318 aa22.34■■□□□ 1.17
ARHGEF28-203ENST00000426542 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.16
ARHGEF28-203ENST00000426542 NLRP13Q86W25 1043 aa22.33■■□□□ 1.16
ARHGEF28-203ENST00000426542 FOXD4L5Q5VV16 416 aaPredicted RBP22.32■■□□□ 1.16
ARHGEF28-203ENST00000426542 FOXD4L4Q8WXT5 416 aaPredicted RBP22.32■■□□□ 1.16
ARHGEF28-203ENST00000426542 IPO9Q96P70 1041 aaKnown RBP22.32■■□□□ 1.16
ARHGEF28-203ENST00000426542 FRAT2O75474 233 aaPredicted RBP22.32■■□□□ 1.16
ARHGEF28-203ENST00000426542 RRP7AQ9Y3A4 280 aaKnown RBP22.31■■□□□ 1.16
ARHGEF28-203ENST00000426542 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
ARHGEF28-203ENST00000426542 KIF16BQ96L93 1317 aa22.3■■□□□ 1.16
ARHGEF28-203ENST00000426542 ST18O60284 1047 aa22.29■■□□□ 1.16
ARHGEF28-203ENST00000426542 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
ARHGEF28-203ENST00000426542 PRM3Q9NNZ6 103 aa22.28■■□□□ 1.16
ARHGEF28-203ENST00000426542 A0A0U1RQG5 324 aaPredicted RBP22.28■■□□□ 1.16
ARHGEF28-203ENST00000426542 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
ARHGEF28-203ENST00000426542 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
ARHGEF28-203ENST00000426542 VPS53Q5VIR6 699 aa22.27■■□□□ 1.15
ARHGEF28-203ENST00000426542 MARCH6O60337 910 aa22.25■■□□□ 1.15
ARHGEF28-203ENST00000426542 SF3A1Q15459 793 aaKnown RBP22.25■■□□□ 1.15
ARHGEF28-203ENST00000426542 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
ARHGEF28-203ENST00000426542 RILPL2Q969X0 211 aa22.24■■□□□ 1.15
ARHGEF28-203ENST00000426542 PHLDB1Q86UU1 1377 aa22.24■■□□□ 1.15
ARHGEF28-203ENST00000426542 PHF14O94880 888 aa22.24■■□□□ 1.15
ARHGEF28-203ENST00000426542 GOLGA6L1Q8N7Z2 621 aa22.24■■□□□ 1.15
ARHGEF28-203ENST00000426542 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
ARHGEF28-203ENST00000426542 ELL2O00472 640 aaPredicted RBP22.22■■□□□ 1.15
ARHGEF28-203ENST00000426542 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
ARHGEF28-203ENST00000426542 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
ARHGEF28-203ENST00000426542 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
ARHGEF28-203ENST00000426542 H3BQV1 296 aa22.21■■□□□ 1.15
ARHGEF28-203ENST00000426542 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
ARHGEF28-203ENST00000426542 PANK3Q9H999 370 aa22.21■■□□□ 1.15
ARHGEF28-203ENST00000426542 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
ARHGEF28-203ENST00000426542 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
ARHGEF28-203ENST00000426542 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF28-203ENST00000426542 TPM3P06753 285 aa22.2■■□□□ 1.14
ARHGEF28-203ENST00000426542 ANKRD45Q5TZF3 282 aa22.19■■□□□ 1.14
ARHGEF28-203ENST00000426542 RSPH4AQ5TD94 716 aa22.19■■□□□ 1.14
ARHGEF28-203ENST00000426542 PES1O00541 588 aaKnown RBP22.18■■□□□ 1.14
ARHGEF28-203ENST00000426542 C1orf141Q5JVX7 400 aa22.18■■□□□ 1.14
ARHGEF28-203ENST00000426542 CEP89Q96ST8 783 aa22.18■■□□□ 1.14
ARHGEF28-203ENST00000426542 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
ARHGEF28-203ENST00000426542 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
ARHGEF28-203ENST00000426542 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
ARHGEF28-203ENST00000426542 TPD52L1Q16890 204 aaPredicted RBP22.16■■□□□ 1.14
ARHGEF28-203ENST00000426542 FAM184AQ8NB25 1140 aa22.16■■□□□ 1.14
ARHGEF28-203ENST00000426542 COG3Q96JB2 828 aa22.16■■□□□ 1.14
ARHGEF28-203ENST00000426542 DDX11L8A8MPP1 907 aa22.15■■□□□ 1.14
ARHGEF28-203ENST00000426542 TNNT3P45378 269 aaPredicted RBP22.15■■□□□ 1.14
ARHGEF28-203ENST00000426542 PLIN1O60240 522 aa22.15■■□□□ 1.14
ARHGEF28-203ENST00000426542 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
ARHGEF28-203ENST00000426542 CENPQQ7L2Z9 268 aaPredicted RBP22.14■■□□□ 1.13
ARHGEF28-203ENST00000426542 FOXD4L6Q3SYB3 417 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF28-203ENST00000426542 FOXD4L3Q6VB84 417 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF28-203ENST00000426542 ANO8Q9HCE9 1232 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF28-203ENST00000426542 RAPGEF2Q9Y4G8 1499 aa22.13■■□□□ 1.13
ARHGEF28-203ENST00000426542 ZKSCAN2Q63HK3 967 aa22.12■■□□□ 1.13
ARHGEF28-203ENST00000426542 AKAP17AQ02040 695 aaKnown RBP22.12■■□□□ 1.13
ARHGEF28-203ENST00000426542 NGEFQ8N5V2 710 aa22.12■■□□□ 1.13
ARHGEF28-203ENST00000426542 CGNL1Q0VF96 1302 aa22.11■■□□□ 1.13
ARHGEF28-203ENST00000426542 EVA1CP58658 441 aa22.11■■□□□ 1.13
ARHGEF28-203ENST00000426542 E9PSI1 815 aa22.1■■□□□ 1.13
ARHGEF28-203ENST00000426542 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
ARHGEF28-203ENST00000426542 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
ARHGEF28-203ENST00000426542 UACAQ9BZF9 1416 aa22.09■■□□□ 1.13
ARHGEF28-203ENST00000426542 SLC4A3P48751 1232 aa22.09■■□□□ 1.13
ARHGEF28-203ENST00000426542 EIF2S2P20042 333 aaKnown RBP22.08■■□□□ 1.13
ARHGEF28-203ENST00000426542 TEFQ10587 303 aa22.08■■□□□ 1.13
ARHGEF28-203ENST00000426542 CRBNQ96SW2 442 aa22.08■■□□□ 1.13
ARHGEF28-203ENST00000426542 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.12
ARHGEF28-203ENST00000426542 DIAPH3Q9NSV4 1193 aa22.08■■□□□ 1.12
ARHGEF28-203ENST00000426542 GOLGA6L19H0YKK7 550 aa22.07■■□□□ 1.12
ARHGEF28-203ENST00000426542 MCTP1Q6DN14 999 aa22.07■■□□□ 1.12
ARHGEF28-203ENST00000426542 TSR1Q2NL82 804 aaKnown RBP22.07■■□□□ 1.12
ARHGEF28-203ENST00000426542 SYNE3Q6ZMZ3 975 aa22.07■■□□□ 1.12
ARHGEF28-203ENST00000426542 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
ARHGEF28-203ENST00000426542 PDE4AP27815 886 aa22.06■■□□□ 1.12
ARHGEF28-203ENST00000426542 TTC5Q8N0Z6 440 aa22.06■■□□□ 1.12
ARHGEF28-203ENST00000426542 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
ARHGEF28-203ENST00000426542 COG6Q9Y2V7 657 aa22.06■■□□□ 1.12
ARHGEF28-203ENST00000426542 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
ARHGEF28-203ENST00000426542 ATP6V1DQ9Y5K8 247 aa22.05■■□□□ 1.12
ARHGEF28-203ENST00000426542 RRP1P56182 461 aaKnown RBP22.05■■□□□ 1.12
ARHGEF28-203ENST00000426542 CHMP4CQ96CF2 233 aa22.05■■□□□ 1.12
ARHGEF28-203ENST00000426542 NEXNQ0ZGT2 675 aa22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 MSH5O43196 834 aa22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 BECN2A8MW95 431 aa22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 VGFO15240 615 aaPredicted RBP22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 TPM2P07951 284 aa22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 C9orf78Q9NZ63 289 aaPredicted RBP22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 RAD21O60216 631 aa22.04■■□□□ 1.12
ARHGEF28-203ENST00000426542 NECTIN2Q92692 538 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms