RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 NAP1L5Q96NT1 182 aaPredicted RBP13.07□□□□□ -0.32
VPS37A-202ENST00000425020 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
VPS37A-202ENST00000425020 KANK1Q14678 1352 aa13.06□□□□□ -0.32
VPS37A-202ENST00000425020 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
VPS37A-202ENST00000425020 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
VPS37A-202ENST00000425020 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
VPS37A-202ENST00000425020 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
VPS37A-202ENST00000425020 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
VPS37A-202ENST00000425020 TMEM132EQ6IEE7 984 aa13.04□□□□□ -0.32
VPS37A-202ENST00000425020 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
VPS37A-202ENST00000425020 PANK1Q8TE04 598 aa13.03□□□□□ -0.32
VPS37A-202ENST00000425020 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
VPS37A-202ENST00000425020 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
VPS37A-202ENST00000425020 PTPRGP23470 1445 aa13.03□□□□□ -0.32
VPS37A-202ENST00000425020 NAIPQ13075 1403 aa13.03□□□□□ -0.32
VPS37A-202ENST00000425020 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
VPS37A-202ENST00000425020 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.32
VPS37A-202ENST00000425020 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
VPS37A-202ENST00000425020 GOLGA6L22H0YM25 854 aa13.02□□□□□ -0.33
VPS37A-202ENST00000425020 HFM1A2PYH4 1435 aa13.01□□□□□ -0.33
VPS37A-202ENST00000425020 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
VPS37A-202ENST00000425020 CFAP70Q5T0N1 1121 aa13□□□□□ -0.33
VPS37A-202ENST00000425020 RWDD1Q9H446 243 aaPredicted RBP13□□□□□ -0.33
VPS37A-202ENST00000425020 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
VPS37A-202ENST00000425020 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
VPS37A-202ENST00000425020 ARID3AQ99856 593 aa12.98□□□□□ -0.33
VPS37A-202ENST00000425020 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
VPS37A-202ENST00000425020 BCAR3O75815 825 aa12.98□□□□□ -0.33
VPS37A-202ENST00000425020 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
VPS37A-202ENST00000425020 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
VPS37A-202ENST00000425020 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
VPS37A-202ENST00000425020 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
VPS37A-202ENST00000425020 CDK13Q14004 1512 aaKnown RBP12.97□□□□□ -0.33
VPS37A-202ENST00000425020 PTMAP06454 111 aaKnown RBP12.97□□□□□ -0.33
VPS37A-202ENST00000425020 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
VPS37A-202ENST00000425020 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
VPS37A-202ENST00000425020 BICRAQ9NZM4 1560 aa12.96□□□□□ -0.33
VPS37A-202ENST00000425020 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.34
VPS37A-202ENST00000425020 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.34
VPS37A-202ENST00000425020 GGNBP2Q9H3C7 697 aa12.95□□□□□ -0.34
VPS37A-202ENST00000425020 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
VPS37A-202ENST00000425020 TOPBP1Q92547 1522 aa12.94□□□□□ -0.34
VPS37A-202ENST00000425020 MS4A1P11836 297 aa12.94□□□□□ -0.34
VPS37A-202ENST00000425020 FOXD4L6Q3SYB3 417 aaPredicted RBP12.94□□□□□ -0.34
VPS37A-202ENST00000425020 DNTTIP2Q5QJE6 756 aaKnown RBP12.94□□□□□ -0.34
VPS37A-202ENST00000425020 FOXD4L3Q6VB84 417 aaPredicted RBP12.94□□□□□ -0.34
VPS37A-202ENST00000425020 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
VPS37A-202ENST00000425020 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
VPS37A-202ENST00000425020 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
VPS37A-202ENST00000425020 LTV1Q96GA3 475 aaPredicted RBP12.93□□□□□ -0.34
VPS37A-202ENST00000425020 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
VPS37A-202ENST00000425020 E9PSI1 815 aa12.93□□□□□ -0.34
VPS37A-202ENST00000425020 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
VPS37A-202ENST00000425020 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
VPS37A-202ENST00000425020 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
VPS37A-202ENST00000425020 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
VPS37A-202ENST00000425020 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
VPS37A-202ENST00000425020 GSE1Q14687 1217 aa12.92□□□□□ -0.34
VPS37A-202ENST00000425020 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
VPS37A-202ENST00000425020 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
VPS37A-202ENST00000425020 HMOX1P09601 288 aa12.91□□□□□ -0.34
VPS37A-202ENST00000425020 MTHFSP49914 203 aa12.91□□□□□ -0.34
VPS37A-202ENST00000425020 NFKBIBQ15653 356 aa12.91□□□□□ -0.34
VPS37A-202ENST00000425020 LNPKQ9C0E8 428 aa12.9□□□□□ -0.34
VPS37A-202ENST00000425020 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
VPS37A-202ENST00000425020 BRPF3Q9ULD4 1205 aa12.89□□□□□ -0.35
VPS37A-202ENST00000425020 EIF3AQ14152 1382 aaKnown RBP12.89□□□□□ -0.35
VPS37A-202ENST00000425020 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
VPS37A-202ENST00000425020 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
VPS37A-202ENST00000425020 MAPKBP1O60336 1514 aa12.89□□□□□ -0.35
VPS37A-202ENST00000425020 KCNJ4P48050 445 aa12.89□□□□□ -0.35
VPS37A-202ENST00000425020 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
VPS37A-202ENST00000425020 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
VPS37A-202ENST00000425020 NAP1L2Q9ULW6 460 aaPredicted RBP12.88□□□□□ -0.35
VPS37A-202ENST00000425020 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
VPS37A-202ENST00000425020 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
VPS37A-202ENST00000425020 RIPK4P57078 832 aa12.88□□□□□ -0.35
VPS37A-202ENST00000425020 GLIPR1L2Q4G1C9 344 aa12.88□□□□□ -0.35
VPS37A-202ENST00000425020 ZKSCAN2Q63HK3 967 aa12.88□□□□□ -0.35
VPS37A-202ENST00000425020 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
VPS37A-202ENST00000425020 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
VPS37A-202ENST00000425020 KIAA1107Q9UPP5 1409 aa12.86□□□□□ -0.35
VPS37A-202ENST00000425020 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
VPS37A-202ENST00000425020 DAPK1P53355 1430 aa12.86□□□□□ -0.35
VPS37A-202ENST00000425020 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
VPS37A-202ENST00000425020 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
VPS37A-202ENST00000425020 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
VPS37A-202ENST00000425020 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
VPS37A-202ENST00000425020 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
VPS37A-202ENST00000425020 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.35
VPS37A-202ENST00000425020 C9orf84Q5VXU9 1444 aa12.83□□□□□ -0.36
VPS37A-202ENST00000425020 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
VPS37A-202ENST00000425020 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.36
VPS37A-202ENST00000425020 FGD1P98174 961 aa12.83□□□□□ -0.36
VPS37A-202ENST00000425020 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
VPS37A-202ENST00000425020 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
VPS37A-202ENST00000425020 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
VPS37A-202ENST00000425020 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
VPS37A-202ENST00000425020 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
VPS37A-202ENST00000425020 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms