RNA–Protein interactions for RNA: ENST00000423239.6

RC3H2-205, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5 BASIC

Gene RC3H2, Length 3,623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-205ENST00000423239 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
RC3H2-205ENST00000423239 ARHGEF5Q12774 1597 aa18.66■□□□□ 0.58
RC3H2-205ENST00000423239 CDC42BPBQ9Y5S2 1711 aa18.65■□□□□ 0.58
RC3H2-205ENST00000423239 PREX2Q70Z35 1606 aa18.65■□□□□ 0.58
RC3H2-205ENST00000423239 GGT6Q6P531 493 aa18.63■□□□□ 0.57
RC3H2-205ENST00000423239 SCAPERQ9BY12 1400 aa18.63■□□□□ 0.57
RC3H2-205ENST00000423239 SPATA31E1Q6ZUB1 1445 aa18.63■□□□□ 0.57
RC3H2-205ENST00000423239 KANK1Q14678 1352 aa18.62■□□□□ 0.57
RC3H2-205ENST00000423239 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
RC3H2-205ENST00000423239 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
RC3H2-205ENST00000423239 ARHGEF12Q9NZN5 1544 aa18.61■□□□□ 0.57
RC3H2-205ENST00000423239 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
RC3H2-205ENST00000423239 ZCCHC11Q5TAX3 1644 aaKnown RBP18.58■□□□□ 0.57
RC3H2-205ENST00000423239 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.56
RC3H2-205ENST00000423239 TMF1P82094 1093 aa18.57■□□□□ 0.56
RC3H2-205ENST00000423239 FANCAO15360 1455 aa18.56■□□□□ 0.56
RC3H2-205ENST00000423239 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
RC3H2-205ENST00000423239 ARID4BQ4LE39 1312 aaPredicted RBP18.55■□□□□ 0.56
RC3H2-205ENST00000423239 DUOX2Q9NRD8 1548 aa18.55■□□□□ 0.56
RC3H2-205ENST00000423239 RALGAPBQ86X10 1494 aa18.55■□□□□ 0.56
RC3H2-205ENST00000423239 WDR7Q9Y4E6 1490 aa18.55■□□□□ 0.56
RC3H2-205ENST00000423239 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
RC3H2-205ENST00000423239 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
RC3H2-205ENST00000423239 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
RC3H2-205ENST00000423239 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
RC3H2-205ENST00000423239 ADGRL1O94910 1474 aa18.52■□□□□ 0.56
RC3H2-205ENST00000423239 PANK3Q9H999 370 aa18.51■□□□□ 0.55
RC3H2-205ENST00000423239 ERBINQ96RT1 1412 aa18.5■□□□□ 0.55
RC3H2-205ENST00000423239 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
RC3H2-205ENST00000423239 PRAG1Q86YV5 1406 aa18.5■□□□□ 0.55
RC3H2-205ENST00000423239 PLA2R1Q13018 1463 aa18.49■□□□□ 0.55
RC3H2-205ENST00000423239 RALBP1Q15311 655 aa18.49■□□□□ 0.55
RC3H2-205ENST00000423239 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
RC3H2-205ENST00000423239 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
RC3H2-205ENST00000423239 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
RC3H2-205ENST00000423239 KTN1Q86UP2 1357 aaKnown RBP18.48■□□□□ 0.55
RC3H2-205ENST00000423239 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
RC3H2-205ENST00000423239 A2MP01023 1474 aa18.46■□□□□ 0.55
RC3H2-205ENST00000423239 MYBBP1AQ9BQG0 1328 aaKnown RBP18.46■□□□□ 0.55
RC3H2-205ENST00000423239 WASHC2CQ9Y4E1 1318 aa18.46■□□□□ 0.55
RC3H2-205ENST00000423239 TSHZ2Q9NRE2 1034 aa18.46■□□□□ 0.54
RC3H2-205ENST00000423239 ABCC1P33527 1531 aa18.45■□□□□ 0.54
RC3H2-205ENST00000423239 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
RC3H2-205ENST00000423239 CD109Q6YHK3 1445 aa18.44■□□□□ 0.54
RC3H2-205ENST00000423239 CFAP70Q5T0N1 1121 aa18.44■□□□□ 0.54
RC3H2-205ENST00000423239 BCORL1Q5H9F3 1711 aa18.43■□□□□ 0.54
RC3H2-205ENST00000423239 KDM5CP41229 1560 aa18.43■□□□□ 0.54
RC3H2-205ENST00000423239 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
RC3H2-205ENST00000423239 NLRP13Q86W25 1043 aa18.42■□□□□ 0.54
RC3H2-205ENST00000423239 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
RC3H2-205ENST00000423239 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
RC3H2-205ENST00000423239 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
RC3H2-205ENST00000423239 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
RC3H2-205ENST00000423239 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
RC3H2-205ENST00000423239 TESK2Q96S53 571 aa18.4■□□□□ 0.54
RC3H2-205ENST00000423239 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
RC3H2-205ENST00000423239 TRAK1Q9UPV9 953 aa18.37■□□□□ 0.53
RC3H2-205ENST00000423239 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
RC3H2-205ENST00000423239 UNC13BO14795 1591 aa18.36■□□□□ 0.53
RC3H2-205ENST00000423239 PPP4R2Q9NY27 417 aa18.36■□□□□ 0.53
RC3H2-205ENST00000423239 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
RC3H2-205ENST00000423239 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
RC3H2-205ENST00000423239 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.533e-17■□□□□ 9.7
RC3H2-205ENST00000423239 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
RC3H2-205ENST00000423239 STAG3Q9UJ98 1225 aa18.34■□□□□ 0.53
RC3H2-205ENST00000423239 BRD4O60885 1362 aaPredicted RBP18.33■□□□□ 0.52
RC3H2-205ENST00000423239 ZFYVE16Q7Z3T8 1539 aa18.33■□□□□ 0.52
RC3H2-205ENST00000423239 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
RC3H2-205ENST00000423239 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
RC3H2-205ENST00000423239 FAM69CQ0P6D2 419 aa18.32■□□□□ 0.52
RC3H2-205ENST00000423239 MLECQ14165 292 aa18.31■□□□□ 0.52
RC3H2-205ENST00000423239 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
RC3H2-205ENST00000423239 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
RC3H2-205ENST00000423239 ATP10AO60312 1499 aa18.31■□□□□ 0.52
RC3H2-205ENST00000423239 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
RC3H2-205ENST00000423239 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
RC3H2-205ENST00000423239 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
RC3H2-205ENST00000423239 CCDC136Q96JN2 1154 aa18.3■□□□□ 0.52
RC3H2-205ENST00000423239 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
RC3H2-205ENST00000423239 STK26Q9P289 416 aa18.28■□□□□ 0.52
RC3H2-205ENST00000423239 CFAP65Q6ZU64 1925 aaKnown RBP18.25■□□□□ 0.51
RC3H2-205ENST00000423239 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
RC3H2-205ENST00000423239 TRPM1Q7Z4N2 1603 aa18.25■□□□□ 0.51
RC3H2-205ENST00000423239 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
RC3H2-205ENST00000423239 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
RC3H2-205ENST00000423239 MAGI2Q86UL8 1455 aa18.24■□□□□ 0.51
RC3H2-205ENST00000423239 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
RC3H2-205ENST00000423239 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
RC3H2-205ENST00000423239 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
RC3H2-205ENST00000423239 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
RC3H2-205ENST00000423239 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
RC3H2-205ENST00000423239 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
RC3H2-205ENST00000423239 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
RC3H2-205ENST00000423239 E9PCH4 1651 aa18.21■□□□□ 0.51
RC3H2-205ENST00000423239 CENPJQ9HC77 1338 aaPredicted RBP18.21■□□□□ 0.51
RC3H2-205ENST00000423239 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
RC3H2-205ENST00000423239 PARD3Q8TEW0 1356 aa18.21■□□□□ 0.51
RC3H2-205ENST00000423239 PTPRTO14522 1441 aa18.21■□□□□ 0.51
RC3H2-205ENST00000423239 NOS1P29475 1434 aa18.21■□□□□ 0.51
RC3H2-205ENST00000423239 POLR1AO95602 1720 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms