RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
NPC1L1-203ENST00000423141 DDRGK1Q96HY6 314 aa22■■□□□ 1.11
NPC1L1-203ENST00000423141 PBRM1Q86U86 1689 aa22■■□□□ 1.11
NPC1L1-203ENST00000423141 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
NPC1L1-203ENST00000423141 C20orf194Q5TEA3 1177 aa21.99■■□□□ 1.11
NPC1L1-203ENST00000423141 ANKRD50Q9ULJ7 1429 aa21.98■■□□□ 1.11
NPC1L1-203ENST00000423141 NUP155O75694 1391 aa21.97■■□□□ 1.11
NPC1L1-203ENST00000423141 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
NPC1L1-203ENST00000423141 ADGRL2O95490 1459 aa21.96■■□□□ 1.11
NPC1L1-203ENST00000423141 FRAT1Q92837 279 aaPredicted RBP21.96■■□□□ 1.11
NPC1L1-203ENST00000423141 ANKRD30AQ9BXX3 1397 aa21.95■■□□□ 1.1
NPC1L1-203ENST00000423141 ARHGEF12Q9NZN5 1544 aa21.95■■□□□ 1.1
NPC1L1-203ENST00000423141 GPATCH8Q9UKJ3 1502 aaKnown RBP21.95■■□□□ 1.1
NPC1L1-203ENST00000423141 CC2D1BQ5T0F9 858 aaKnown RBP21.94■■□□□ 1.1
NPC1L1-203ENST00000423141 DISP1Q96F81 1524 aa21.94■■□□□ 1.1
NPC1L1-203ENST00000423141 PER1O15534 1290 aaPredicted RBP21.94■■□□□ 1.1
NPC1L1-203ENST00000423141 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
NPC1L1-203ENST00000423141 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
NPC1L1-203ENST00000423141 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
NPC1L1-203ENST00000423141 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
NPC1L1-203ENST00000423141 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
NPC1L1-203ENST00000423141 KDM2BQ8NHM5 1336 aa21.91■■□□□ 1.1
NPC1L1-203ENST00000423141 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
NPC1L1-203ENST00000423141 NBPF1Q3BBV0 1214 aa21.87■■□□□ 1.09
NPC1L1-203ENST00000423141 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
NPC1L1-203ENST00000423141 DAXXQ9UER7 740 aaPredicted RBP21.87■■□□□ 1.09
NPC1L1-203ENST00000423141 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
NPC1L1-203ENST00000423141 C8orf34Q49A92 452 aa21.86■■□□□ 1.09
NPC1L1-203ENST00000423141 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
NPC1L1-203ENST00000423141 FRAT2O75474 233 aaPredicted RBP21.84■■□□□ 1.09
NPC1L1-203ENST00000423141 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
NPC1L1-203ENST00000423141 DISP3Q9P2K9 1392 aa21.82■■□□□ 1.08
NPC1L1-203ENST00000423141 FAM161AQ3B820 660 aa21.82■■□□□ 1.08
NPC1L1-203ENST00000423141 CENPQQ7L2Z9 268 aaPredicted RBP21.82■■□□□ 1.08
NPC1L1-203ENST00000423141 PANK3Q9H999 370 aa21.82■■□□□ 1.08
NPC1L1-203ENST00000423141 PLB1Q6P1J6 1458 aa21.82■■□□□ 1.08
NPC1L1-203ENST00000423141 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
NPC1L1-203ENST00000423141 ZMYM4Q5VZL5 1548 aa21.81■■□□□ 1.08
NPC1L1-203ENST00000423141 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
NPC1L1-203ENST00000423141 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
NPC1L1-203ENST00000423141 ADAMTS8Q9UP79 889 aa21.8■■□□□ 1.08
NPC1L1-203ENST00000423141 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
NPC1L1-203ENST00000423141 RGS3P49796 1198 aa21.79■■□□□ 1.08
NPC1L1-203ENST00000423141 TRPM1Q7Z4N2 1603 aa21.78■■□□□ 1.08
NPC1L1-203ENST00000423141 TESK2Q96S53 571 aa21.78■■□□□ 1.08
NPC1L1-203ENST00000423141 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.08
NPC1L1-203ENST00000423141 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.08
NPC1L1-203ENST00000423141 EIF5BO60841 1220 aaKnown RBP21.77■■□□□ 1.08
NPC1L1-203ENST00000423141 DUSP27Q5VZP5 1158 aa21.76■■□□□ 1.07
NPC1L1-203ENST00000423141 INSRP06213 1382 aa21.76■■□□□ 1.07
NPC1L1-203ENST00000423141 CDC42BPAQ5VT25 1732 aa21.76■■□□□ 1.07
NPC1L1-203ENST00000423141 PLEKHH2Q8IVE3 1493 aa21.75■■□□□ 1.07
NPC1L1-203ENST00000423141 ADCY10Q96PN6 1610 aa21.74■■□□□ 1.07
NPC1L1-203ENST00000423141 PTPRGP23470 1445 aa21.74■■□□□ 1.07
NPC1L1-203ENST00000423141 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
NPC1L1-203ENST00000423141 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
NPC1L1-203ENST00000423141 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
NPC1L1-203ENST00000423141 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.07
NPC1L1-203ENST00000423141 CCDC144AA2RUR9 1427 aa21.69■■□□□ 1.06
NPC1L1-203ENST00000423141 ERBINQ96RT1 1412 aa21.69■■□□□ 1.06
NPC1L1-203ENST00000423141 GPRASP1Q5JY77 1395 aa21.69■■□□□ 1.06
NPC1L1-203ENST00000423141 UBE2Q2Q8WVN8 375 aa21.68■■□□□ 1.06
NPC1L1-203ENST00000423141 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
NPC1L1-203ENST00000423141 ZNF521Q96K83 1311 aa21.67■■□□□ 1.06
NPC1L1-203ENST00000423141 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
NPC1L1-203ENST00000423141 A2MP01023 1474 aa21.67■■□□□ 1.06
NPC1L1-203ENST00000423141 GOLGA2Q08379 1002 aa21.66■■□□□ 1.06
NPC1L1-203ENST00000423141 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
NPC1L1-203ENST00000423141 WDR43Q15061 677 aaKnown RBP eCLIP21.65■■□□□ 1.06
NPC1L1-203ENST00000423141 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
NPC1L1-203ENST00000423141 PPP2R1AP30153 589 aa21.64■■□□□ 1.06
NPC1L1-203ENST00000423141 TMF1P82094 1093 aa21.64■■□□□ 1.05
NPC1L1-203ENST00000423141 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.05
NPC1L1-203ENST00000423141 PLA2R1Q13018 1463 aa21.63■■□□□ 1.05
NPC1L1-203ENST00000423141 SPINK5Q9NQ38 1064 aaPredicted RBP21.63■■□□□ 1.05
NPC1L1-203ENST00000423141 POGKQ9P215 609 aa21.63■■□□□ 1.05
NPC1L1-203ENST00000423141 USP19O94966 1318 aa21.63■■□□□ 1.05
NPC1L1-203ENST00000423141 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.62■■□□□ 1.05
NPC1L1-203ENST00000423141 PLEKHD1A6NEE1 506 aa21.62■■□□□ 1.05
NPC1L1-203ENST00000423141 FAM43AQ8N2R8 423 aa21.62■■□□□ 1.05
NPC1L1-203ENST00000423141 MAGI2Q86UL8 1455 aa21.61■■□□□ 1.05
NPC1L1-203ENST00000423141 SLFN5Q08AF3 891 aa21.61■■□□□ 1.05
NPC1L1-203ENST00000423141 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
NPC1L1-203ENST00000423141 BCAR3O75815 825 aa21.6■■□□□ 1.05
NPC1L1-203ENST00000423141 SEC24BO95487 1268 aa21.6■■□□□ 1.05
NPC1L1-203ENST00000423141 IGHDP01880 384 aa21.6■■□□□ 1.05
NPC1L1-203ENST00000423141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.05
NPC1L1-203ENST00000423141 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
NPC1L1-203ENST00000423141 KNSTRNQ9Y448 316 aa21.57■■□□□ 1.04
NPC1L1-203ENST00000423141 WDR7Q9Y4E6 1490 aa21.56■■□□□ 1.04
NPC1L1-203ENST00000423141 LAMC1P11047 1609 aa21.56■■□□□ 1.04
NPC1L1-203ENST00000423141 SLKQ9H2G2 1235 aaPredicted RBP21.56■■□□□ 1.04
NPC1L1-203ENST00000423141 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
NPC1L1-203ENST00000423141 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
NPC1L1-203ENST00000423141 EIF3AQ14152 1382 aaKnown RBP21.55■■□□□ 1.04
NPC1L1-203ENST00000423141 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
NPC1L1-203ENST00000423141 TRMT2AQ8IZ69 625 aaKnown RBP21.54■■□□□ 1.04
NPC1L1-203ENST00000423141 MYO5CQ9NQX4 1742 aa21.53■■□□□ 1.04
NPC1L1-203ENST00000423141 ATP10BO94823 1461 aa21.52■■□□□ 1.04
NPC1L1-203ENST00000423141 DMRT2Q9Y5R5 561 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms