RNA–Protein interactions for RNA: ENST00000421421.1

GAPDHP49-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 49, humanhuman

BASIC

Gene GAPDHP49, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP49-201ENST00000421421 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
GAPDHP49-201ENST00000421421 SLC34A2O95436 690 aa9.08□□□□□ -0.96
GAPDHP49-201ENST00000421421 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
GAPDHP49-201ENST00000421421 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
GAPDHP49-201ENST00000421421 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
GAPDHP49-201ENST00000421421 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
GAPDHP49-201ENST00000421421 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
GAPDHP49-201ENST00000421421 DPYSL4O14531 572 aa9.06□□□□□ -0.96
GAPDHP49-201ENST00000421421 ARHGAP33O14559 1287 aa9.06□□□□□ -0.96
GAPDHP49-201ENST00000421421 DSG2Q14126 1118 aa9.06□□□□□ -0.96
GAPDHP49-201ENST00000421421 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
GAPDHP49-201ENST00000421421 PSDA5PKW4 1024 aaPredicted RBP9.05□□□□□ -0.96
GAPDHP49-201ENST00000421421 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
GAPDHP49-201ENST00000421421 SPDYE16A6NNV3 312 aaPredicted RBP9.04□□□□□ -0.96
GAPDHP49-201ENST00000421421 TMC2Q8TDI7 906 aa9.04□□□□□ -0.96
GAPDHP49-201ENST00000421421 TK2O00142 265 aa9.03□□□□□ -0.96
GAPDHP49-201ENST00000421421 CUX2O14529 1486 aa9.02□□□□□ -0.96
GAPDHP49-201ENST00000421421 NCAPD3P42695 1498 aa9.02□□□□□ -0.96
GAPDHP49-201ENST00000421421 FOXK1P85037 733 aa9.02□□□□□ -0.97
GAPDHP49-201ENST00000421421 PDIA6Q15084 440 aa9.02□□□□□ -0.97
GAPDHP49-201ENST00000421421 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
GAPDHP49-201ENST00000421421 AK7Q96M32 723 aa9.01□□□□□ -0.97
GAPDHP49-201ENST00000421421 KRI1Q8N9T8 703 aaKnown RBP9□□□□□ -0.97
GAPDHP49-201ENST00000421421 HRO43593 1189 aa8.99□□□□□ -0.97
GAPDHP49-201ENST00000421421 PLPP6Q8IY26 295 aa8.99□□□□□ -0.97
GAPDHP49-201ENST00000421421 RGS20O76081 388 aa8.95□□□□□ -0.98
GAPDHP49-201ENST00000421421 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
GAPDHP49-201ENST00000421421 ERCC6Q03468 1493 aa8.95□□□□□ -0.98
GAPDHP49-201ENST00000421421 ATAD2BQ9ULI0 1458 aa8.95□□□□□ -0.98
GAPDHP49-201ENST00000421421 MAP3K9P80192 1104 aa8.94□□□□□ -0.98
GAPDHP49-201ENST00000421421 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
GAPDHP49-201ENST00000421421 STAC3Q96MF2 364 aa8.94□□□□□ -0.98
GAPDHP49-201ENST00000421421 GPBP1L1Q9HC44 474 aaPredicted RBP8.94□□□□□ -0.98
GAPDHP49-201ENST00000421421 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
GAPDHP49-201ENST00000421421 GRXCR2A6NFK2 248 aa8.92□□□□□ -0.98
GAPDHP49-201ENST00000421421 TRIM66O15016 1216 aa8.92□□□□□ -0.98
GAPDHP49-201ENST00000421421 PSEN2P49810 448 aa8.92□□□□□ -0.98
GAPDHP49-201ENST00000421421 GPR37O15354 613 aa8.91□□□□□ -0.98
GAPDHP49-201ENST00000421421 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
GAPDHP49-201ENST00000421421 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
GAPDHP49-201ENST00000421421 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
GAPDHP49-201ENST00000421421 PDE4DQ08499 809 aa8.9□□□□□ -0.98
GAPDHP49-201ENST00000421421 IRX2Q9BZI1 471 aaPredicted RBP8.9□□□□□ -0.98
GAPDHP49-201ENST00000421421 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
GAPDHP49-201ENST00000421421 NESP48681 1621 aa8.9□□□□□ -0.99
GAPDHP49-201ENST00000421421 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
GAPDHP49-201ENST00000421421 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
GAPDHP49-201ENST00000421421 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
GAPDHP49-201ENST00000421421 NUTM2FA1L443 756 aa8.88□□□□□ -0.99
GAPDHP49-201ENST00000421421 IL27Q8NEV9 243 aa8.88□□□□□ -0.99
GAPDHP49-201ENST00000421421 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
GAPDHP49-201ENST00000421421 MINK1Q8N4C8 1332 aaPredicted RBP8.86□□□□□ -0.99
GAPDHP49-201ENST00000421421 OSBPP22059 807 aa8.85□□□□□ -0.99
GAPDHP49-201ENST00000421421 PTPN5P54829 565 aa8.85□□□□□ -0.99
GAPDHP49-201ENST00000421421 MAP2K5Q13163 448 aa8.84□□□□□ -0.99
GAPDHP49-201ENST00000421421 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
GAPDHP49-201ENST00000421421 SMARCA2P51531 1590 aa8.83□□□□□ -1
GAPDHP49-201ENST00000421421 TBC1D12O60347 775 aa8.83□□□□□ -1
GAPDHP49-201ENST00000421421 DDX12PQ92771 950 aa8.83□□□□□ -1
GAPDHP49-201ENST00000421421 ARXQ96QS3 562 aa8.83□□□□□ -1
GAPDHP49-201ENST00000421421 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
GAPDHP49-201ENST00000421421 HMGXB3Q12766 1538 aa8.83□□□□□ -1
GAPDHP49-201ENST00000421421 GNPATO15228 680 aa8.82□□□□□ -1
GAPDHP49-201ENST00000421421 CCDC102AQ96A19 550 aa8.82□□□□□ -1
GAPDHP49-201ENST00000421421 A0A0G2JS52 829 aa8.81□□□□□ -1
GAPDHP49-201ENST00000421421 IRF6O14896 467 aa8.81□□□□□ -1
GAPDHP49-201ENST00000421421 FCHSD2O94868 740 aa8.81□□□□□ -1
GAPDHP49-201ENST00000421421 HIC1Q14526 733 aa8.81□□□□□ -1
GAPDHP49-201ENST00000421421 EVI5O60447 810 aa8.8□□□□□ -1
GAPDHP49-201ENST00000421421 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
GAPDHP49-201ENST00000421421 SMARCA4P51532 1647 aa8.79□□□□□ -1
GAPDHP49-201ENST00000421421 BAZ1BQ9UIG0 1483 aaKnown RBP8.78□□□□□ -1
GAPDHP49-201ENST00000421421 FECHP22830 423 aa8.78□□□□□ -1
GAPDHP49-201ENST00000421421 AMHR2Q16671 573 aa8.78□□□□□ -1
GAPDHP49-201ENST00000421421 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
GAPDHP49-201ENST00000421421 FAM117AQ9C073 453 aa8.78□□□□□ -1
GAPDHP49-201ENST00000421421 PRIM1P49642 420 aaKnown RBP8.77□□□□□ -1.01
GAPDHP49-201ENST00000421421 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
GAPDHP49-201ENST00000421421 PDS5BQ9NTI5 1447 aa8.76□□□□□ -1.01
GAPDHP49-201ENST00000421421 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
GAPDHP49-201ENST00000421421 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
GAPDHP49-201ENST00000421421 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
GAPDHP49-201ENST00000421421 CADPSQ9ULU8 1353 aa8.74□□□□□ -1.01
GAPDHP49-201ENST00000421421 PEG3Q9GZU2 1588 aa8.74□□□□□ -1.01
GAPDHP49-201ENST00000421421 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
GAPDHP49-201ENST00000421421 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
GAPDHP49-201ENST00000421421 PTGDRQ13258 359 aa8.74□□□□□ -1.01
GAPDHP49-201ENST00000421421 BCL2L12Q9HB09 334 aa8.74□□□□□ -1.01
GAPDHP49-201ENST00000421421 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
GAPDHP49-201ENST00000421421 LAMC3Q9Y6N6 1575 aa8.73□□□□□ -1.01
GAPDHP49-201ENST00000421421 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
GAPDHP49-201ENST00000421421 ANO8Q9HCE9 1232 aaPredicted RBP8.73□□□□□ -1.01
GAPDHP49-201ENST00000421421 WNT2BQ93097 391 aa8.72□□□□□ -1.01
GAPDHP49-201ENST00000421421 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
GAPDHP49-201ENST00000421421 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
GAPDHP49-201ENST00000421421 TTLL12Q14166 644 aaPredicted RBP8.7□□□□□ -1.02
GAPDHP49-201ENST00000421421 HOMEZQ8IX15 550 aa8.7□□□□□ -1.02
GAPDHP49-201ENST00000421421 MRPL50Q8N5N7 158 aaKnown RBP8.7□□□□□ -1.02
GAPDHP49-201ENST00000421421 EPAS1Q99814 870 aa8.7□□□□□ -1.02
GAPDHP49-201ENST00000421421 PHF14O94880 888 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms