RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
VPS8-202ENST00000421069 KHSRPQ92945 711 aaKnown RBP eCLIP9.82□□□□□ -0.841e-7■■■□□ 17.4
VPS8-202ENST00000421069 ZDHHC16Q969W1 377 aa9.82□□□□□ -0.84
VPS8-202ENST00000421069 CDHR5Q9HBB8 845 aa9.82□□□□□ -0.84
VPS8-202ENST00000421069 DAXXQ9UER7 740 aaPredicted RBP9.82□□□□□ -0.84
VPS8-202ENST00000421069 ZNF454Q8N9F8 522 aa9.81□□□□□ -0.84
VPS8-202ENST00000421069 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
VPS8-202ENST00000421069 AMHR2Q16671 573 aa9.8□□□□□ -0.84
VPS8-202ENST00000421069 TSR1Q2NL82 804 aaKnown RBP9.8□□□□□ -0.84
VPS8-202ENST00000421069 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
VPS8-202ENST00000421069 KDM4CQ9H3R0 1056 aa9.78□□□□□ -0.84
VPS8-202ENST00000421069 GPBP1L1Q9HC44 474 aaPredicted RBP9.78□□□□□ -0.84
VPS8-202ENST00000421069 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
VPS8-202ENST00000421069 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
VPS8-202ENST00000421069 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
VPS8-202ENST00000421069 ADAM33Q9BZ11 813 aa9.76□□□□□ -0.85
VPS8-202ENST00000421069 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
VPS8-202ENST00000421069 OTUD5Q96G74 571 aa9.75□□□□□ -0.85
VPS8-202ENST00000421069 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
VPS8-202ENST00000421069 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
VPS8-202ENST00000421069 TTC13Q8NBP0 860 aa9.72□□□□□ -0.85
VPS8-202ENST00000421069 BCL2L12Q9HB09 334 aa9.72□□□□□ -0.85
VPS8-202ENST00000421069 OATP04181 439 aa9.7□□□□□ -0.86
VPS8-202ENST00000421069 PRSS12P56730 875 aa9.7□□□□□ -0.86
VPS8-202ENST00000421069 LHX8Q68G74 356 aa9.7□□□□□ -0.86
VPS8-202ENST00000421069 PADI6Q6TGC4 694 aa9.7□□□□□ -0.86
VPS8-202ENST00000421069 IL27Q8NEV9 243 aa9.69□□□□□ -0.86
VPS8-202ENST00000421069 TTLL12Q14166 644 aaPredicted RBP9.68□□□□□ -0.86
VPS8-202ENST00000421069 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
VPS8-202ENST00000421069 PTPREP23469 700 aa9.67□□□□□ -0.86
VPS8-202ENST00000421069 CLCN1P35523 988 aa9.67□□□□□ -0.86
VPS8-202ENST00000421069 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
VPS8-202ENST00000421069 CDCA7LQ96GN5 454 aa9.67□□□□□ -0.86
VPS8-202ENST00000421069 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
VPS8-202ENST00000421069 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
VPS8-202ENST00000421069 PPP1R3GB7ZBB8 358 aa9.66□□□□□ -0.86
VPS8-202ENST00000421069 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
VPS8-202ENST00000421069 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
VPS8-202ENST00000421069 COL9A1P20849 921 aa9.65□□□□□ -0.86
VPS8-202ENST00000421069 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
VPS8-202ENST00000421069 PHOX2BQ99453 314 aa9.65□□□□□ -0.86
VPS8-202ENST00000421069 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
VPS8-202ENST00000421069 GPCPD1Q9NPB8 672 aa9.64□□□□□ -0.87
VPS8-202ENST00000421069 RBM46Q8TBY0 533 aaKnown RBP9.63□□□□□ -0.87
VPS8-202ENST00000421069 PLEKHG3A1L390 1219 aa9.62□□□□□ -0.87
VPS8-202ENST00000421069 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
VPS8-202ENST00000421069 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
VPS8-202ENST00000421069 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
VPS8-202ENST00000421069 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
VPS8-202ENST00000421069 MS4A1P11836 297 aa9.6□□□□□ -0.87
VPS8-202ENST00000421069 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
VPS8-202ENST00000421069 FAM198AQ9UFP1 575 aa9.6□□□□□ -0.87
VPS8-202ENST00000421069 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
VPS8-202ENST00000421069 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
VPS8-202ENST00000421069 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
VPS8-202ENST00000421069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
VPS8-202ENST00000421069 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
VPS8-202ENST00000421069 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
VPS8-202ENST00000421069 EYA1Q99502 592 aa9.58□□□□□ -0.88
VPS8-202ENST00000421069 ERBB3P21860 1342 aa9.57□□□□□ -0.88
VPS8-202ENST00000421069 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
VPS8-202ENST00000421069 KCNK17Q96T54 332 aa9.57□□□□□ -0.88
VPS8-202ENST00000421069 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
VPS8-202ENST00000421069 ST18O60284 1047 aa9.56□□□□□ -0.88
VPS8-202ENST00000421069 RCCD1A6NED2 376 aa9.55□□□□□ -0.88
VPS8-202ENST00000421069 TATDN2Q93075 761 aa9.55□□□□□ -0.88
VPS8-202ENST00000421069 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
VPS8-202ENST00000421069 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
VPS8-202ENST00000421069 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
VPS8-202ENST00000421069 NUDT18Q6ZVK8 323 aa9.54□□□□□ -0.88
VPS8-202ENST00000421069 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
VPS8-202ENST00000421069 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
VPS8-202ENST00000421069 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
VPS8-202ENST00000421069 PBX2P40425 430 aa9.53□□□□□ -0.88
VPS8-202ENST00000421069 EMP3P54852 163 aa9.53□□□□□ -0.88
VPS8-202ENST00000421069 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
VPS8-202ENST00000421069 DNAJB2P25686 324 aa9.52□□□□□ -0.89
VPS8-202ENST00000421069 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
VPS8-202ENST00000421069 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
VPS8-202ENST00000421069 PSEN2P49810 448 aa9.51□□□□□ -0.89
VPS8-202ENST00000421069 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
VPS8-202ENST00000421069 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
VPS8-202ENST00000421069 C3orf80F5H4A9 247 aa9.5□□□□□ -0.89
VPS8-202ENST00000421069 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
VPS8-202ENST00000421069 KIAA1468Q9P260 1216 aa9.5□□□□□ -0.89
VPS8-202ENST00000421069 POTEEQ6S8J3 1075 aa9.49□□□□□ -0.89
VPS8-202ENST00000421069 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
VPS8-202ENST00000421069 TMEM134Q9H6X4 195 aa9.49□□□□□ -0.89
VPS8-202ENST00000421069 RABGEF1Q9UJ41 708 aa9.49□□□□□ -0.89
VPS8-202ENST00000421069 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
VPS8-202ENST00000421069 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
VPS8-202ENST00000421069 PCMTD1Q96MG8 357 aaPredicted RBP9.48□□□□□ -0.89
VPS8-202ENST00000421069 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
VPS8-202ENST00000421069 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
VPS8-202ENST00000421069 FAM205CA6NFA0 338 aa9.46□□□□□ -0.9
VPS8-202ENST00000421069 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
VPS8-202ENST00000421069 SMAPO00193 183 aa9.45□□□□□ -0.9
VPS8-202ENST00000421069 CD46P15529 392 aa9.45□□□□□ -0.9
VPS8-202ENST00000421069 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
VPS8-202ENST00000421069 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms