RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 CDK12Q9NYV4 1490 aaPredicted RBP6.12□□□□□ -1.43
PTPN22-202ENST00000420377 CFAP44Q96MT7 982 aa6.12□□□□□ -1.43
PTPN22-202ENST00000420377 C3P01024 1663 aa6.12□□□□□ -1.43
PTPN22-202ENST00000420377 PDE4CQ08493 712 aa6.11□□□□□ -1.43
PTPN22-202ENST00000420377 BCANQ96GW7 911 aa6.11□□□□□ -1.43
PTPN22-202ENST00000420377 KDM2AQ9Y2K7 1162 aa6.11□□□□□ -1.43
PTPN22-202ENST00000420377 LRRC9Q6ZRR7 1453 aa6.1□□□□□ -1.43
PTPN22-202ENST00000420377 PLEKHH2Q8IVE3 1493 aa6.1□□□□□ -1.43
PTPN22-202ENST00000420377 MYO5CQ9NQX4 1742 aa6.1□□□□□ -1.43
PTPN22-202ENST00000420377 PAXIP1Q6ZW49 1069 aaPredicted RBP6.1□□□□□ -1.43
PTPN22-202ENST00000420377 TAOK2Q9UL54 1235 aa6.1□□□□□ -1.43
PTPN22-202ENST00000420377 KDM5AP29375 1690 aaKnown RBP6.09□□□□□ -1.43
PTPN22-202ENST00000420377 ECM2O94769 699 aaPredicted RBP6.09□□□□□ -1.43
PTPN22-202ENST00000420377 ERICH6BQ5W0A0 696 aa6.09□□□□□ -1.43
PTPN22-202ENST00000420377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPN22-202ENST00000420377 RNF17Q9BXT8 1623 aaKnown RBP6.09□□□□□ -1.43
PTPN22-202ENST00000420377 DIP2CQ9Y2E4 1556 aa6.09□□□□□ -1.44
PTPN22-202ENST00000420377 KDM5DQ9BY66 1539 aa6.08□□□□□ -1.44
PTPN22-202ENST00000420377 A2ML1A8K2U0 1454 aa6.08□□□□□ -1.44
PTPN22-202ENST00000420377 POLR1AO95602 1720 aaPredicted RBP6.08□□□□□ -1.44
PTPN22-202ENST00000420377 NCOA3Q9Y6Q9 1424 aa6.07□□□□□ -1.44
PTPN22-202ENST00000420377 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
PTPN22-202ENST00000420377 PPARGC1BQ86YN6 1023 aaKnown RBP6.07□□□□□ -1.44
PTPN22-202ENST00000420377 CAMSAP2Q08AD1 1489 aa6.07□□□□□ -1.44
PTPN22-202ENST00000420377 RGL2O15211 777 aa6.07□□□□□ -1.44
PTPN22-202ENST00000420377 TPRNQ4KMQ1 711 aa6.06□□□□□ -1.44
PTPN22-202ENST00000420377 ABCC3O15438 1527 aa6.06□□□□□ -1.44
PTPN22-202ENST00000420377 CDK13Q14004 1512 aaKnown RBP6.06□□□□□ -1.44
PTPN22-202ENST00000420377 PLXNC1O60486 1568 aa6.06□□□□□ -1.44
PTPN22-202ENST00000420377 TAF7LQ5H9L4 462 aa6.06□□□□□ -1.44
PTPN22-202ENST00000420377 NLRP1Q9C000 1473 aa6.06□□□□□ -1.44
PTPN22-202ENST00000420377 KIAA1107Q9UPP5 1409 aa6.06□□□□□ -1.44
PTPN22-202ENST00000420377 ITSN2Q9NZM3 1697 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 TOM1O60784 492 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 MYO3AQ8NEV4 1616 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 GTF3C3Q9Y5Q9 886 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 ADGBQ8N7X0 1667 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 NUP153P49790 1475 aaKnown RBP6.05□□□□□ -1.44
PTPN22-202ENST00000420377 RTEL1-TNFRSF6BF6WH68 1400 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 EFCAB2Q5VUJ9 269 aa6.05□□□□□ -1.44
PTPN22-202ENST00000420377 CEP170BQ9Y4F5 1589 aaPredicted RBP6.05□□□□□ -1.44
PTPN22-202ENST00000420377 CAMSAP1Q5T5Y3 1602 aa6.04□□□□□ -1.44
PTPN22-202ENST00000420377 PLCD3Q8N3E9 789 aa6.04□□□□□ -1.44
PTPN22-202ENST00000420377 RNF39Q9H2S5 420 aa6.04□□□□□ -1.44
PTPN22-202ENST00000420377 PLEKHD1A6NEE1 506 aa6.04□□□□□ -1.44
PTPN22-202ENST00000420377 ZC3H13Q5T200 1668 aaKnown RBP6.03□□□□□ -1.44
PTPN22-202ENST00000420377 FAM135BQ49AJ0 1406 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 SPOCK2Q92563 424 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.03□□□□□ -1.44
PTPN22-202ENST00000420377 SHANK2Q9UPX8 1470 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 RAPGEF3O95398 923 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 FGD1P98174 961 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 VSIG10Q8N0Z9 540 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 VWDEQ8N2E2 1590 aa6.03□□□□□ -1.44
PTPN22-202ENST00000420377 SIGLEC1Q9BZZ2 1709 aa6.02□□□□□ -1.45
PTPN22-202ENST00000420377 ZNF692Q9BU19 519 aaPredicted RBP6.02□□□□□ -1.45
PTPN22-202ENST00000420377 PREX2Q70Z35 1606 aa6.02□□□□□ -1.45
PTPN22-202ENST00000420377 ABCC1P33527 1531 aa6.02□□□□□ -1.45
PTPN22-202ENST00000420377 CLIP1P30622 1438 aa6.02□□□□□ -1.45
PTPN22-202ENST00000420377 FGD6Q6ZV73 1430 aa6.02□□□□□ -1.45
PTPN22-202ENST00000420377 TSHZ2Q9NRE2 1034 aa6.02□□□□□ -1.45
PTPN22-202ENST00000420377 CDK11AQ9UQ88 783 aaPredicted RBP6.02□□□□□ -1.45
PTPN22-202ENST00000420377 CCDC18Q5T9S5 1454 aa6.01□□□□□ -1.45
PTPN22-202ENST00000420377 ZEB1P37275 1124 aaPredicted RBP6.01□□□□□ -1.45
PTPN22-202ENST00000420377 SCAPERQ9BY12 1400 aa6.01□□□□□ -1.45
PTPN22-202ENST00000420377 MYT1LQ9UL68 1186 aa6.01□□□□□ -1.45
PTPN22-202ENST00000420377 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
PTPN22-202ENST00000420377 ATP7AQ04656 1500 aa6□□□□□ -1.45
PTPN22-202ENST00000420377 FMN1Q68DA7 1419 aa6□□□□□ -1.45
PTPN22-202ENST00000420377 NEUROD1Q13562 356 aa6□□□□□ -1.45
PTPN22-202ENST00000420377 ABCA6Q8N139 1617 aa6□□□□□ -1.45
PTPN22-202ENST00000420377 CHGAP10645 457 aaKnown RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 MIER1Q8N108 512 aa5.99□□□□□ -1.45
PTPN22-202ENST00000420377 CIZ1Q9ULV3 898 aaPredicted RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 INO80Q9ULG1 1556 aaPredicted RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 DNMT1P26358 1616 aaKnown RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 TROQ12816 1431 aaPredicted RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 SUPT6HQ7KZ85 1726 aaKnown RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 BBXQ8WY36 941 aaPredicted RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 ARID4BQ4LE39 1312 aaPredicted RBP5.99□□□□□ -1.45
PTPN22-202ENST00000420377 BRD2P25440 801 aaKnown RBP5.98□□□□□ -1.45
PTPN22-202ENST00000420377 NEURL4Q96JN8 1562 aa5.98□□□□□ -1.45
PTPN22-202ENST00000420377 RSPH4AQ5TD94 716 aa5.98□□□□□ -1.45
PTPN22-202ENST00000420377 KIDINS220Q9ULH0 1771 aa5.98□□□□□ -1.45
PTPN22-202ENST00000420377 C14orf37Q86TY3 774 aa5.97□□□□□ -1.45
PTPN22-202ENST00000420377 PZPP20742 1482 aa5.97□□□□□ -1.45
PTPN22-202ENST00000420377 EIF2AK4Q9P2K8 1649 aaKnown RBP5.97□□□□□ -1.45
PTPN22-202ENST00000420377 NWD1Q149M9 1564 aa5.97□□□□□ -1.45
PTPN22-202ENST00000420377 ALKQ9UM73 1620 aa5.97□□□□□ -1.45
PTPN22-202ENST00000420377 SALL2Q9Y467 1007 aaPredicted RBP5.97□□□□□ -1.45
PTPN22-202ENST00000420377 SLIT1O75093 1534 aa5.96□□□□□ -1.46
PTPN22-202ENST00000420377 BCL11BQ9C0K0 894 aaPredicted RBP5.96□□□□□ -1.46
PTPN22-202ENST00000420377 SAMD9LQ8IVG5 1584 aa5.95□□□□□ -1.46
PTPN22-202ENST00000420377 SPRYD3Q8NCJ5 442 aa5.95□□□□□ -1.46
PTPN22-202ENST00000420377 CHMP4AQ9BY43 222 aa5.95□□□□□ -1.46
PTPN22-202ENST00000420377 LRP5O75197 1615 aa5.95□□□□□ -1.46
PTPN22-202ENST00000420377 NKTRP30414 1462 aaKnown RBP5.95□□□□□ -1.46
PTPN22-202ENST00000420377 ARHGAP23Q9P227 1491 aa5.95□□□□□ -1.46
PTPN22-202ENST00000420377 IQGAP1P46940 1657 aa5.95□□□□□ -1.46
PTPN22-202ENST00000420377 ZBTB12Q9Y330 459 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms