RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DPYSL4O14531 572 aa9.57□□□□□ -0.88
SDCBPP3-201ENST00000419629 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
SDCBPP3-201ENST00000419629 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
SDCBPP3-201ENST00000419629 EPAS1Q99814 870 aa9.55□□□□□ -0.88
SDCBPP3-201ENST00000419629 C6orf132Q5T0Z8 1188 aa9.54□□□□□ -0.88
SDCBPP3-201ENST00000419629 LAPTM4BQ86VI4 370 aa9.52□□□□□ -0.89
SDCBPP3-201ENST00000419629 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
SDCBPP3-201ENST00000419629 ONECUT3O60422 494 aaPredicted RBP9.51□□□□□ -0.89
SDCBPP3-201ENST00000419629 ANKK1Q8NFD2 765 aa9.5□□□□□ -0.89
SDCBPP3-201ENST00000419629 DDX12PQ92771 950 aa9.5□□□□□ -0.89
SDCBPP3-201ENST00000419629 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
SDCBPP3-201ENST00000419629 A0A0G2JS52 829 aa9.48□□□□□ -0.89
SDCBPP3-201ENST00000419629 RGS20O76081 388 aa9.48□□□□□ -0.89
SDCBPP3-201ENST00000419629 BCAMP50895 628 aa9.48□□□□□ -0.89
SDCBPP3-201ENST00000419629 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
SDCBPP3-201ENST00000419629 SOWAHBA6NEL2 793 aa9.47□□□□□ -0.89
SDCBPP3-201ENST00000419629 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
SDCBPP3-201ENST00000419629 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
SDCBPP3-201ENST00000419629 PDIA6Q15084 440 aa9.46□□□□□ -0.9
SDCBPP3-201ENST00000419629 SEPT9Q9UHD8 586 aaPredicted RBP9.46□□□□□ -0.9
SDCBPP3-201ENST00000419629 ITGBL1O95965 494 aaPredicted RBP9.44□□□□□ -0.9
SDCBPP3-201ENST00000419629 EN1Q05925 392 aaPredicted RBP9.44□□□□□ -0.9
SDCBPP3-201ENST00000419629 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
SDCBPP3-201ENST00000419629 NBR1Q14596 966 aa9.43□□□□□ -0.9
SDCBPP3-201ENST00000419629 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
SDCBPP3-201ENST00000419629 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
SDCBPP3-201ENST00000419629 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
SDCBPP3-201ENST00000419629 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
SDCBPP3-201ENST00000419629 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.41□□□□□ -0.9
SDCBPP3-201ENST00000419629 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
SDCBPP3-201ENST00000419629 MAP3K7O43318 606 aa9.4□□□□□ -0.9
SDCBPP3-201ENST00000419629 E2F4Q16254 413 aa9.4□□□□□ -0.9
SDCBPP3-201ENST00000419629 ARIH1Q9Y4X5 557 aaPredicted RBP9.4□□□□□ -0.9
SDCBPP3-201ENST00000419629 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
SDCBPP3-201ENST00000419629 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
SDCBPP3-201ENST00000419629 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
SDCBPP3-201ENST00000419629 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.37□□□□□ -0.91
SDCBPP3-201ENST00000419629 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
SDCBPP3-201ENST00000419629 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
SDCBPP3-201ENST00000419629 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
SDCBPP3-201ENST00000419629 HPS5Q9UPZ3 1129 aa9.36□□□□□ -0.91
SDCBPP3-201ENST00000419629 CDCA7LQ96GN5 454 aa9.35□□□□□ -0.91
SDCBPP3-201ENST00000419629 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
SDCBPP3-201ENST00000419629 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
SDCBPP3-201ENST00000419629 PRSS12P56730 875 aa9.34□□□□□ -0.91
SDCBPP3-201ENST00000419629 KCNC4Q03721 635 aa9.34□□□□□ -0.91
SDCBPP3-201ENST00000419629 CFAP44Q96MT7 982 aa9.34□□□□□ -0.91
SDCBPP3-201ENST00000419629 IRX2Q9BZI1 471 aaPredicted RBP9.34□□□□□ -0.91
SDCBPP3-201ENST00000419629 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
SDCBPP3-201ENST00000419629 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
SDCBPP3-201ENST00000419629 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
SDCBPP3-201ENST00000419629 SMAPO00193 183 aa9.32□□□□□ -0.92
SDCBPP3-201ENST00000419629 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
SDCBPP3-201ENST00000419629 OSBPP22059 807 aa9.31□□□□□ -0.92
SDCBPP3-201ENST00000419629 SAMD7Q7Z3H4 446 aa9.3□□□□□ -0.92
SDCBPP3-201ENST00000419629 PPP4CP60510 307 aa9.29□□□□□ -0.92
SDCBPP3-201ENST00000419629 TATDN2Q93075 761 aa9.29□□□□□ -0.92
SDCBPP3-201ENST00000419629 CDHR5Q9HBB8 845 aa9.28□□□□□ -0.92
SDCBPP3-201ENST00000419629 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
SDCBPP3-201ENST00000419629 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
SDCBPP3-201ENST00000419629 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
SDCBPP3-201ENST00000419629 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
SDCBPP3-201ENST00000419629 TTC13Q8NBP0 860 aa9.24□□□□□ -0.93
SDCBPP3-201ENST00000419629 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
SDCBPP3-201ENST00000419629 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
SDCBPP3-201ENST00000419629 MTRQ99707 1265 aa9.2□□□□□ -0.94
SDCBPP3-201ENST00000419629 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
SDCBPP3-201ENST00000419629 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
SDCBPP3-201ENST00000419629 IL21Q9HBE4 155 aa9.18□□□□□ -0.94
SDCBPP3-201ENST00000419629 APLP1P51693 650 aa9.17□□□□□ -0.94
SDCBPP3-201ENST00000419629 ZNF516Q92618 1163 aa9.16□□□□□ -0.94
SDCBPP3-201ENST00000419629 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
SDCBPP3-201ENST00000419629 RNF40O75150 1001 aa9.15□□□□□ -0.94
SDCBPP3-201ENST00000419629 MLLT3P42568 568 aaPredicted RBP9.15□□□□□ -0.94
SDCBPP3-201ENST00000419629 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
SDCBPP3-201ENST00000419629 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
SDCBPP3-201ENST00000419629 EYA1Q99502 592 aa9.15□□□□□ -0.94
SDCBPP3-201ENST00000419629 Q6ZNB5 142 aa9.14□□□□□ -0.95
SDCBPP3-201ENST00000419629 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
SDCBPP3-201ENST00000419629 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
SDCBPP3-201ENST00000419629 KCNV2Q8TDN2 545 aa9.12□□□□□ -0.95
SDCBPP3-201ENST00000419629 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
SDCBPP3-201ENST00000419629 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
SDCBPP3-201ENST00000419629 LAPTM4AQ15012 233 aa9.1□□□□□ -0.95
SDCBPP3-201ENST00000419629 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
SDCBPP3-201ENST00000419629 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.1□□□□□ -0.95
SDCBPP3-201ENST00000419629 PTGDRQ13258 359 aa9.09□□□□□ -0.95
SDCBPP3-201ENST00000419629 LCE2BO14633 110 aa9.08□□□□□ -0.96
SDCBPP3-201ENST00000419629 GFRA3O60609 400 aa9.08□□□□□ -0.96
SDCBPP3-201ENST00000419629 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
SDCBPP3-201ENST00000419629 COPS2P61201 443 aa9.07□□□□□ -0.96
SDCBPP3-201ENST00000419629 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
SDCBPP3-201ENST00000419629 ADGRG1Q9Y653 693 aa9.05□□□□□ -0.96
SDCBPP3-201ENST00000419629 ZPR1O75312 459 aa9.04□□□□□ -0.96
SDCBPP3-201ENST00000419629 DNAJB2P25686 324 aa9.03□□□□□ -0.96
SDCBPP3-201ENST00000419629 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
SDCBPP3-201ENST00000419629 TMEM134Q9H6X4 195 aa9.03□□□□□ -0.96
SDCBPP3-201ENST00000419629 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
SDCBPP3-201ENST00000419629 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
SDCBPP3-201ENST00000419629 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms