RNA–Protein interactions for RNA: ENST00000419069.1

LINC00317-201, long intergenic non-protein coding RNA 317, humanhuman

TSL 1 (best) BASIC

Gene LINC00317, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00317-201ENST00000419069 SLAIN1Q8ND83 568 aa11.56□□□□□ -0.56
LINC00317-201ENST00000419069 MS4A1P11836 297 aa11.55□□□□□ -0.56
LINC00317-201ENST00000419069 NPDC1Q9NQX5 325 aaPredicted RBP11.55□□□□□ -0.56
LINC00317-201ENST00000419069 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
LINC00317-201ENST00000419069 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
LINC00317-201ENST00000419069 PCDHGA10Q9Y5H3 936 aa11.54□□□□□ -0.56
LINC00317-201ENST00000419069 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
LINC00317-201ENST00000419069 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
LINC00317-201ENST00000419069 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
LINC00317-201ENST00000419069 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
LINC00317-201ENST00000419069 REPIN1Q9BWE0 567 aaKnown RBP11.52□□□□□ -0.57
LINC00317-201ENST00000419069 JPH4Q96JJ6 628 aa11.5□□□□□ -0.57
LINC00317-201ENST00000419069 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
LINC00317-201ENST00000419069 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
LINC00317-201ENST00000419069 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
LINC00317-201ENST00000419069 CERKQ8TCT0 537 aa11.47□□□□□ -0.57
LINC00317-201ENST00000419069 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
LINC00317-201ENST00000419069 OATP04181 439 aa11.46□□□□□ -0.57
LINC00317-201ENST00000419069 PHOX2BQ99453 314 aa11.46□□□□□ -0.57
LINC00317-201ENST00000419069 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
LINC00317-201ENST00000419069 FOSBP53539 338 aa11.43□□□□□ -0.58
LINC00317-201ENST00000419069 PADI6Q6TGC4 694 aa11.43□□□□□ -0.58
LINC00317-201ENST00000419069 METTL3Q86U44 580 aaKnown RBP11.43□□□□□ -0.58
LINC00317-201ENST00000419069 ARID3AQ99856 593 aa11.43□□□□□ -0.58
LINC00317-201ENST00000419069 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
LINC00317-201ENST00000419069 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
LINC00317-201ENST00000419069 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
LINC00317-201ENST00000419069 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
LINC00317-201ENST00000419069 ZDHHC16Q969W1 377 aa11.42□□□□□ -0.58
LINC00317-201ENST00000419069 ONECUT3O60422 494 aaPredicted RBP11.41□□□□□ -0.58
LINC00317-201ENST00000419069 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
LINC00317-201ENST00000419069 FAM217BQ9NTX9 383 aaPredicted RBP11.41□□□□□ -0.58
LINC00317-201ENST00000419069 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
LINC00317-201ENST00000419069 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
LINC00317-201ENST00000419069 NLRP7Q8WX94 980 aa11.4□□□□□ -0.58
LINC00317-201ENST00000419069 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
LINC00317-201ENST00000419069 PXYLP1Q8TE99 480 aa11.39□□□□□ -0.59
LINC00317-201ENST00000419069 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
LINC00317-201ENST00000419069 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
LINC00317-201ENST00000419069 APBB1O00213 710 aa11.37□□□□□ -0.59
LINC00317-201ENST00000419069 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
LINC00317-201ENST00000419069 NUDT7P0C024 238 aa11.36□□□□□ -0.59
LINC00317-201ENST00000419069 POLR3EQ9NVU0 708 aa11.36□□□□□ -0.59
LINC00317-201ENST00000419069 A6NJR5 290 aa11.35□□□□□ -0.59
LINC00317-201ENST00000419069 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
LINC00317-201ENST00000419069 MCM6Q14566 821 aa11.35□□□□□ -0.59
LINC00317-201ENST00000419069 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
LINC00317-201ENST00000419069 ADAM33Q9BZ11 813 aa11.35□□□□□ -0.59
LINC00317-201ENST00000419069 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
LINC00317-201ENST00000419069 PRSS12P56730 875 aa11.34□□□□□ -0.59
LINC00317-201ENST00000419069 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
LINC00317-201ENST00000419069 ARSIQ5FYB1 569 aa11.33□□□□□ -0.6
LINC00317-201ENST00000419069 TTC13Q8NBP0 860 aa11.33□□□□□ -0.6
LINC00317-201ENST00000419069 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
LINC00317-201ENST00000419069 MYSM1Q5VVJ2 828 aa11.32□□□□□ -0.6
LINC00317-201ENST00000419069 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
LINC00317-201ENST00000419069 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
LINC00317-201ENST00000419069 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00317-201ENST00000419069 TRAK2O60296 914 aa11.3□□□□□ -0.6
LINC00317-201ENST00000419069 DIXDC1Q155Q3 683 aa11.3□□□□□ -0.6
LINC00317-201ENST00000419069 TBC1D2Q9BYX2 928 aa11.3□□□□□ -0.6
LINC00317-201ENST00000419069 RAD21O60216 631 aa11.29□□□□□ -0.6
LINC00317-201ENST00000419069 POTEHQ6S545 545 aa11.29□□□□□ -0.6
LINC00317-201ENST00000419069 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
LINC00317-201ENST00000419069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
LINC00317-201ENST00000419069 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
LINC00317-201ENST00000419069 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
LINC00317-201ENST00000419069 HOXB3P14651 431 aaPredicted RBP11.26□□□□□ -0.61
LINC00317-201ENST00000419069 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
LINC00317-201ENST00000419069 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00317-201ENST00000419069 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
LINC00317-201ENST00000419069 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
LINC00317-201ENST00000419069 RCCD1A6NED2 376 aa11.24□□□□□ -0.61
LINC00317-201ENST00000419069 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
LINC00317-201ENST00000419069 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
LINC00317-201ENST00000419069 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
LINC00317-201ENST00000419069 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
LINC00317-201ENST00000419069 RFC5P40937 340 aa11.22□□□□□ -0.61
LINC00317-201ENST00000419069 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
LINC00317-201ENST00000419069 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
LINC00317-201ENST00000419069 COL9A1P20849 921 aa11.21□□□□□ -0.61
LINC00317-201ENST00000419069 PTPREP23469 700 aa11.21□□□□□ -0.61
LINC00317-201ENST00000419069 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
LINC00317-201ENST00000419069 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
LINC00317-201ENST00000419069 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
LINC00317-201ENST00000419069 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 POM121Q96HA1 1249 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 EYA1Q99502 592 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 SCUBE2Q9NQ36 999 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 LIMD1Q9UGP4 676 aa11.2□□□□□ -0.62
LINC00317-201ENST00000419069 CD46P15529 392 aa11.19□□□□□ -0.62
LINC00317-201ENST00000419069 DNAJB2P25686 324 aa11.19□□□□□ -0.62
LINC00317-201ENST00000419069 TMEM259Q4ZIN3 620 aa11.19□□□□□ -0.62
LINC00317-201ENST00000419069 NUDT18Q6ZVK8 323 aa11.19□□□□□ -0.62
LINC00317-201ENST00000419069 SPIRE2Q8WWL2 714 aa11.19□□□□□ -0.62
LINC00317-201ENST00000419069 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
LINC00317-201ENST00000419069 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
LINC00317-201ENST00000419069 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms