RNA–Protein interactions for RNA: ENST00000419004.2

SNX5-203, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-203ENST00000419004 ROBO1Q9Y6N7 1651 aa24.66■■□□□ 1.54
SNX5-203ENST00000419004 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
SNX5-203ENST00000419004 ITSN2Q9NZM3 1697 aa24.65■■□□□ 1.54
SNX5-203ENST00000419004 GGT6Q6P531 493 aa24.63■■□□□ 1.53
SNX5-203ENST00000419004 XIRP1Q702N8 1843 aaKnown RBP24.61■■□□□ 1.53
SNX5-203ENST00000419004 TNRQ92752 1358 aa24.61■■□□□ 1.53
SNX5-203ENST00000419004 FAM135AQ9P2D6 1515 aa24.56■■□□□ 1.52
SNX5-203ENST00000419004 NUTM2BA6NNL0 878 aaPredicted RBP24.56■■□□□ 1.52
SNX5-203ENST00000419004 NUTM2EB1AL46 878 aaPredicted RBP24.56■■□□□ 1.52
SNX5-203ENST00000419004 NUTM2DQ5VT03 806 aaPredicted RBP24.56■■□□□ 1.52
SNX5-203ENST00000419004 NUTM2AQ8IVF1 878 aaPredicted RBP24.56■■□□□ 1.52
SNX5-203ENST00000419004 LRP6O75581 1613 aa24.56■■□□□ 1.52
SNX5-203ENST00000419004 PHLPP1O60346 1717 aa24.55■■□□□ 1.52
SNX5-203ENST00000419004 SPATA31A6Q5VVP1 1343 aa24.55■■□□□ 1.52
SNX5-203ENST00000419004 KIF14Q15058 1648 aa24.53■■□□□ 1.52
SNX5-203ENST00000419004 UGGT1Q9NYU2 1555 aa24.52■■□□□ 1.52
SNX5-203ENST00000419004 FBXO31Q5XUX0 539 aaPredicted RBP24.52■■□□□ 1.52
SNX5-203ENST00000419004 KDM5DQ9BY66 1539 aa24.51■■□□□ 1.51
SNX5-203ENST00000419004 CDK11AQ9UQ88 783 aaPredicted RBP24.5■■□□□ 1.51
SNX5-203ENST00000419004 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
SNX5-203ENST00000419004 LRRC9Q6ZRR7 1453 aa24.48■■□□□ 1.51
SNX5-203ENST00000419004 RGS12O14924 1447 aa24.47■■□□□ 1.51
SNX5-203ENST00000419004 ATAD2Q6PL18 1390 aa24.45■■□□□ 1.5
SNX5-203ENST00000419004 PLXNC1O60486 1568 aa24.45■■□□□ 1.5
SNX5-203ENST00000419004 NLRP1Q9C000 1473 aa24.45■■□□□ 1.5
SNX5-203ENST00000419004 SPAG9O60271 1321 aaKnown RBP24.44■■□□□ 1.5
SNX5-203ENST00000419004 A2MP01023 1474 aa24.44■■□□□ 1.5
SNX5-203ENST00000419004 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
SNX5-203ENST00000419004 SAMD9LQ8IVG5 1584 aa24.43■■□□□ 1.5
SNX5-203ENST00000419004 RBM6P78332 1123 aaKnown RBP24.4■■□□□ 1.5
SNX5-203ENST00000419004 FGD6Q6ZV73 1430 aa24.4■■□□□ 1.5
SNX5-203ENST00000419004 TMEM94Q12767 1356 aa24.4■■□□□ 1.5
SNX5-203ENST00000419004 MIA2Q96PC5 1412 aa24.39■■□□□ 1.5
SNX5-203ENST00000419004 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
SNX5-203ENST00000419004 LRP5O75197 1615 aa24.38■■□□□ 1.49
SNX5-203ENST00000419004 PZPP20742 1482 aa24.38■■□□□ 1.49
SNX5-203ENST00000419004 CLIP1P30622 1438 aa24.37■■□□□ 1.49
SNX5-203ENST00000419004 COL16A1Q07092 1604 aaPredicted RBP24.37■■□□□ 1.49
SNX5-203ENST00000419004 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
SNX5-203ENST00000419004 AFF2P51816 1311 aa24.36■■□□□ 1.49
SNX5-203ENST00000419004 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
SNX5-203ENST00000419004 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
SNX5-203ENST00000419004 YY1P25490 414 aa24.34■■□□□ 1.49
SNX5-203ENST00000419004 SLAIN2Q9P270 581 aa24.34■■□□□ 1.49
SNX5-203ENST00000419004 QTRT2Q9H974 415 aaKnown RBP24.32■■□□□ 1.48
SNX5-203ENST00000419004 CCDC125Q86Z20 511 aa24.3■■□□□ 1.48
SNX5-203ENST00000419004 SHPRHQ149N8 1683 aa24.28■■□□□ 1.48
SNX5-203ENST00000419004 PROSER2Q86WR7 435 aaPredicted RBP24.28■■□□□ 1.48
SNX5-203ENST00000419004 SCAF11Q99590 1463 aaKnown RBP24.26■■□□□ 1.47
SNX5-203ENST00000419004 MAP3K1Q13233 1512 aa24.26■■□□□ 1.47
SNX5-203ENST00000419004 NGLY1Q96IV0 654 aa24.26■■□□□ 1.47
SNX5-203ENST00000419004 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
SNX5-203ENST00000419004 ZNF777Q9ULD5 760 aaPredicted RBP24.24■■□□□ 1.47
SNX5-203ENST00000419004 MSH6P52701 1360 aa24.24■■□□□ 1.47
SNX5-203ENST00000419004 INO80Q9ULG1 1556 aaPredicted RBP24.22■■□□□ 1.47
SNX5-203ENST00000419004 HNRNPMP52272 730 aaKnown RBP eCLIP24.22■■□□□ 1.474e-7■■□□□ 12
SNX5-203ENST00000419004 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
SNX5-203ENST00000419004 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.47
SNX5-203ENST00000419004 TXNDC2Q86VQ3 553 aa24.2■■□□□ 1.46
SNX5-203ENST00000419004 WASHC2CQ9Y4E1 1318 aa24.19■■□□□ 1.46
SNX5-203ENST00000419004 KCNA6P17658 529 aa24.19■■□□□ 1.46
SNX5-203ENST00000419004 LTKP29376 864 aa24.18■■□□□ 1.46
SNX5-203ENST00000419004 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
SNX5-203ENST00000419004 C8orf37Q96NL8 207 aa24.14■■□□□ 1.45
SNX5-203ENST00000419004 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
SNX5-203ENST00000419004 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
SNX5-203ENST00000419004 PRDM15P57071 1507 aaPredicted RBP24.13■■□□□ 1.45
SNX5-203ENST00000419004 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
SNX5-203ENST00000419004 EP400Q96L91 3159 aa24.12■■□□□ 1.45
SNX5-203ENST00000419004 EID1Q9Y6B2 187 aa24.12■■□□□ 1.45
SNX5-203ENST00000419004 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
SNX5-203ENST00000419004 SENP3-EIF4A1A0A087X0R7 540 aa24.11■■□□□ 1.45
SNX5-203ENST00000419004 ABCC3O15438 1527 aa24.1■■□□□ 1.45
SNX5-203ENST00000419004 KIF3BO15066 747 aa24.1■■□□□ 1.45
SNX5-203ENST00000419004 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
SNX5-203ENST00000419004 UBR1Q8IWV7 1749 aa24.08■■□□□ 1.45
SNX5-203ENST00000419004 NHSL1Q5SYE7 1610 aa24.08■■□□□ 1.45
SNX5-203ENST00000419004 ARHGAP23Q9P227 1491 aa24.06■■□□□ 1.44
SNX5-203ENST00000419004 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
SNX5-203ENST00000419004 SLIT1O75093 1534 aa24.05■■□□□ 1.44
SNX5-203ENST00000419004 KIAA1107Q9UPP5 1409 aa24.04■■□□□ 1.44
SNX5-203ENST00000419004 NKTRP30414 1462 aaKnown RBP24.04■■□□□ 1.44
SNX5-203ENST00000419004 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
SNX5-203ENST00000419004 HRCP23327 699 aa24.02■■□□□ 1.44
SNX5-203ENST00000419004 DIP2AQ14689 1571 aa24.01■■□□□ 1.43
SNX5-203ENST00000419004 PLEKHH2Q8IVE3 1493 aa24■■□□□ 1.43
SNX5-203ENST00000419004 KDM5AP29375 1690 aaKnown RBP24■■□□□ 1.43
SNX5-203ENST00000419004 PSDA5PKW4 1024 aaPredicted RBP23.98■■□□□ 1.43
SNX5-203ENST00000419004 BLMP54132 1417 aaPredicted RBP23.97■■□□□ 1.43
SNX5-203ENST00000419004 CEP162Q5TB80 1403 aa23.97■■□□□ 1.43
SNX5-203ENST00000419004 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
SNX5-203ENST00000419004 SLC26A8Q96RN1 970 aa23.96■■□□□ 1.43
SNX5-203ENST00000419004 TRPC5Q9UL62 973 aaPredicted RBP23.96■■□□□ 1.43
SNX5-203ENST00000419004 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
SNX5-203ENST00000419004 CASKIN1Q8WXD9 1431 aa23.93■■□□□ 1.42
SNX5-203ENST00000419004 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
SNX5-203ENST00000419004 SF3B2Q13435 895 aaKnown RBP23.92■■□□□ 1.42
SNX5-203ENST00000419004 USP21Q9UK80 565 aa23.92■■□□□ 1.42
SNX5-203ENST00000419004 RTEL1-TNFRSF6BF6WH68 1400 aa23.91■■□□□ 1.42
SNX5-203ENST00000419004 GPATCH8Q9UKJ3 1502 aaKnown RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms