RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
HNF4A-204ENST00000415691 DHX29Q7Z478 1369 aaKnown RBP18.86■□□□□ 0.61
HNF4A-204ENST00000415691 TRIM52Q96A61 297 aa18.85■□□□□ 0.61
HNF4A-204ENST00000415691 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
HNF4A-204ENST00000415691 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
HNF4A-204ENST00000415691 MAGI2Q86UL8 1455 aa18.84■□□□□ 0.61
HNF4A-204ENST00000415691 A2MP01023 1474 aa18.83■□□□□ 0.61
HNF4A-204ENST00000415691 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.61
HNF4A-204ENST00000415691 KIF3BO15066 747 aa18.83■□□□□ 0.6
HNF4A-204ENST00000415691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.61e-8■□□□□ 10
HNF4A-204ENST00000415691 ATP10AO60312 1499 aa18.8■□□□□ 0.6
HNF4A-204ENST00000415691 ERBINQ96RT1 1412 aa18.8■□□□□ 0.6
HNF4A-204ENST00000415691 NUP155O75694 1391 aa18.76■□□□□ 0.59
HNF4A-204ENST00000415691 GGT6Q6P531 493 aa18.76■□□□□ 0.59
HNF4A-204ENST00000415691 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
HNF4A-204ENST00000415691 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
HNF4A-204ENST00000415691 MPHOSPH9Q99550 1183 aa18.74■□□□□ 0.59
HNF4A-204ENST00000415691 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
HNF4A-204ENST00000415691 MLECQ14165 292 aa18.72■□□□□ 0.59
HNF4A-204ENST00000415691 FOXD1Q16676 465 aa18.72■□□□□ 0.59
HNF4A-204ENST00000415691 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
HNF4A-204ENST00000415691 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
HNF4A-204ENST00000415691 PZPP20742 1482 aa18.7■□□□□ 0.58
HNF4A-204ENST00000415691 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
HNF4A-204ENST00000415691 UNC13BO14795 1591 aa18.67■□□□□ 0.58
HNF4A-204ENST00000415691 REREQ9P2R6 1566 aa18.67■□□□□ 0.58
HNF4A-204ENST00000415691 PKD2Q13563 968 aa18.67■□□□□ 0.58
HNF4A-204ENST00000415691 MROH1Q8NDA8 1641 aa18.66■□□□□ 0.58
HNF4A-204ENST00000415691 AGLP35573 1532 aa18.65■□□□□ 0.58
HNF4A-204ENST00000415691 FAM135AQ9P2D6 1515 aa18.65■□□□□ 0.58
HNF4A-204ENST00000415691 DEPDC5O75140 1603 aa18.64■□□□□ 0.58
HNF4A-204ENST00000415691 WASHC2CQ9Y4E1 1318 aa18.64■□□□□ 0.58
HNF4A-204ENST00000415691 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
HNF4A-204ENST00000415691 KANK1Q14678 1352 aa18.64■□□□□ 0.57
HNF4A-204ENST00000415691 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
HNF4A-204ENST00000415691 RNF17Q9BXT8 1623 aaKnown RBP18.63■□□□□ 0.57
HNF4A-204ENST00000415691 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
HNF4A-204ENST00000415691 VWDEQ8N2E2 1590 aa18.61■□□□□ 0.57
HNF4A-204ENST00000415691 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
HNF4A-204ENST00000415691 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
HNF4A-204ENST00000415691 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
HNF4A-204ENST00000415691 ABCC3O15438 1527 aa18.56■□□□□ 0.56
HNF4A-204ENST00000415691 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
HNF4A-204ENST00000415691 CEP152O94986 1710 aa18.55■□□□□ 0.56
HNF4A-204ENST00000415691 ANKRD30BQ9BXX2 1392 aa18.55■□□□□ 0.56
HNF4A-204ENST00000415691 LMTK2Q8IWU2 1503 aa18.53■□□□□ 0.56
HNF4A-204ENST00000415691 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
HNF4A-204ENST00000415691 E9PCH4 1651 aa18.51■□□□□ 0.55
HNF4A-204ENST00000415691 TET3O43151 1660 aa18.51■□□□□ 0.55
HNF4A-204ENST00000415691 FBXO31Q5XUX0 539 aaPredicted RBP18.51■□□□□ 0.55
HNF4A-204ENST00000415691 NPATQ14207 1427 aa18.5■□□□□ 0.55
HNF4A-204ENST00000415691 PLA2R1Q13018 1463 aa18.5■□□□□ 0.55
HNF4A-204ENST00000415691 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
HNF4A-204ENST00000415691 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
HNF4A-204ENST00000415691 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
HNF4A-204ENST00000415691 CEBPAP49715 358 aaPredicted RBP18.48■□□□□ 0.55
HNF4A-204ENST00000415691 FKBP8Q14318 412 aa18.48■□□□□ 0.55
HNF4A-204ENST00000415691 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
HNF4A-204ENST00000415691 CAMSAP1Q5T5Y3 1602 aa18.47■□□□□ 0.55
HNF4A-204ENST00000415691 ZC3H13Q5T200 1668 aaKnown RBP18.45■□□□□ 0.54
HNF4A-204ENST00000415691 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
HNF4A-204ENST00000415691 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
HNF4A-204ENST00000415691 PTPRTO14522 1441 aa18.44■□□□□ 0.54
HNF4A-204ENST00000415691 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
HNF4A-204ENST00000415691 NEFLP07196 543 aa18.43■□□□□ 0.54
HNF4A-204ENST00000415691 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
HNF4A-204ENST00000415691 CNTLNQ9NXG0 1405 aa18.41■□□□□ 0.54
HNF4A-204ENST00000415691 BCANQ96GW7 911 aa18.4■□□□□ 0.54
HNF4A-204ENST00000415691 MADDQ8WXG6 1647 aa18.4■□□□□ 0.54
HNF4A-204ENST00000415691 PRKCSHP14314 528 aaPredicted RBP18.4■□□□□ 0.54
HNF4A-204ENST00000415691 UGGT1Q9NYU2 1555 aa18.4■□□□□ 0.54
HNF4A-204ENST00000415691 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.54
HNF4A-204ENST00000415691 NOS1P29475 1434 aa18.39■□□□□ 0.54
HNF4A-204ENST00000415691 FER1L4A9Z1Z3 1794 aa18.39■□□□□ 0.53
HNF4A-204ENST00000415691 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.53
HNF4A-204ENST00000415691 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
HNF4A-204ENST00000415691 IDI1Q13907 227 aa18.38■□□□□ 0.53
HNF4A-204ENST00000415691 TRPM2O94759 1503 aa18.37■□□□□ 0.53
HNF4A-204ENST00000415691 MSH5O43196 834 aa18.37■□□□□ 0.53
HNF4A-204ENST00000415691 RGL3Q3MIN7 710 aa18.37■□□□□ 0.53
HNF4A-204ENST00000415691 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
HNF4A-204ENST00000415691 KDM4FA0A1W2PPD8 638 aa18.35■□□□□ 0.53
HNF4A-204ENST00000415691 L3MBTL2Q969R5 705 aa18.35■□□□□ 0.53
HNF4A-204ENST00000415691 RIMS1Q86UR5 1692 aaKnown RBP18.35■□□□□ 0.53
HNF4A-204ENST00000415691 SYNMO15061 1565 aa18.35■□□□□ 0.53
HNF4A-204ENST00000415691 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
HNF4A-204ENST00000415691 CLTCL1P53675 1640 aa18.35■□□□□ 0.53
HNF4A-204ENST00000415691 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
HNF4A-204ENST00000415691 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
HNF4A-204ENST00000415691 MROH2AA6NES4 1674 aa18.33■□□□□ 0.53
HNF4A-204ENST00000415691 C3P01024 1663 aa18.33■□□□□ 0.52
HNF4A-204ENST00000415691 SLC52A1Q9NWF4 448 aa18.32■□□□□ 0.52
HNF4A-204ENST00000415691 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
HNF4A-204ENST00000415691 CCER2I3L3R5 266 aa18.31■□□□□ 0.52
HNF4A-204ENST00000415691 TNRQ92752 1358 aa18.31■□□□□ 0.52
HNF4A-204ENST00000415691 ERICH6Q7L0X2 663 aa18.29■□□□□ 0.52
HNF4A-204ENST00000415691 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
HNF4A-204ENST00000415691 KDM2AQ9Y2K7 1162 aa18.29■□□□□ 0.52
HNF4A-204ENST00000415691 PTPRMP28827 1452 aa18.29■□□□□ 0.52
HNF4A-204ENST00000415691 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms