RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 MFSD10Q14728 455 aa7.65□□□□□ -1.18
LINC00428-201ENST00000415620 PROX2Q3B8N5 592 aa7.65□□□□□ -1.18
LINC00428-201ENST00000415620 FBXW7Q969H0 707 aa7.65□□□□□ -1.18
LINC00428-201ENST00000415620 BCAMP50895 628 aa7.64□□□□□ -1.19
LINC00428-201ENST00000415620 KCNC4Q03721 635 aa7.64□□□□□ -1.19
LINC00428-201ENST00000415620 TYW1BQ6NUM6 668 aa7.64□□□□□ -1.19
LINC00428-201ENST00000415620 ONECUT3O60422 494 aaPredicted RBP7.63□□□□□ -1.19
LINC00428-201ENST00000415620 COL9A1P20849 921 aa7.63□□□□□ -1.19
LINC00428-201ENST00000415620 PHF14O94880 888 aa7.62□□□□□ -1.19
LINC00428-201ENST00000415620 ZFRQ96KR1 1074 aaKnown RBP7.62□□□□□ -1.19
LINC00428-201ENST00000415620 KIAA1468Q9P260 1216 aa7.62□□□□□ -1.19
LINC00428-201ENST00000415620 EMILIN3Q9NT22 766 aa7.61□□□□□ -1.19
LINC00428-201ENST00000415620 LAPTM4AQ15012 233 aa7.6□□□□□ -1.19
LINC00428-201ENST00000415620 WBP1LQ9NX94 342 aa7.6□□□□□ -1.19
LINC00428-201ENST00000415620 EPAS1Q99814 870 aa7.58□□□□□ -1.2
LINC00428-201ENST00000415620 C6orf132Q5T0Z8 1188 aa7.57□□□□□ -1.2
LINC00428-201ENST00000415620 SEPT9Q9UHD8 586 aaPredicted RBP7.57□□□□□ -1.2
LINC00428-201ENST00000415620 TSR3Q9UJK0 312 aaKnown RBP7.57□□□□□ -1.2
LINC00428-201ENST00000415620 FAM98CQ17RN3 349 aaKnown RBP7.56□□□□□ -1.2
LINC00428-201ENST00000415620 LRCH3Q96II8 777 aa7.56□□□□□ -1.2
LINC00428-201ENST00000415620 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
LINC00428-201ENST00000415620 TRIM6-TRIM34B2RNG4 842 aa7.55□□□□□ -1.2
LINC00428-201ENST00000415620 CADPS2Q86UW7 1296 aa7.54□□□□□ -1.2
LINC00428-201ENST00000415620 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
LINC00428-201ENST00000415620 GFRA3O60609 400 aa7.52□□□□□ -1.21
LINC00428-201ENST00000415620 CAMK2BQ13554 666 aa7.52□□□□□ -1.21
LINC00428-201ENST00000415620 TRAF7Q6Q0C0 670 aa7.52□□□□□ -1.21
LINC00428-201ENST00000415620 PPP4CP60510 307 aa7.51□□□□□ -1.21
LINC00428-201ENST00000415620 PACS2Q86VP3 889 aa7.51□□□□□ -1.21
LINC00428-201ENST00000415620 RBM33Q96EV2 1170 aaKnown RBP7.51□□□□□ -1.21
LINC00428-201ENST00000415620 DPYSL4O14531 572 aa7.48□□□□□ -1.21
LINC00428-201ENST00000415620 NRG2O14511 850 aaPredicted RBP7.46□□□□□ -1.22
LINC00428-201ENST00000415620 DDX12PQ92771 950 aa7.46□□□□□ -1.22
LINC00428-201ENST00000415620 PRKD2Q9BZL6 878 aa7.46□□□□□ -1.22
LINC00428-201ENST00000415620 TJAP1Q5JTD0 557 aa7.45□□□□□ -1.22
LINC00428-201ENST00000415620 LCE2BO14633 110 aa7.44□□□□□ -1.22
LINC00428-201ENST00000415620 MAP3K7O43318 606 aa7.44□□□□□ -1.22
LINC00428-201ENST00000415620 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
LINC00428-201ENST00000415620 TSKSQ9UJT2 592 aa7.44□□□□□ -1.22
LINC00428-201ENST00000415620 DCAF8L2P0C7V8 631 aa7.43□□□□□ -1.22
LINC00428-201ENST00000415620 NBR1Q14596 966 aa7.43□□□□□ -1.22
LINC00428-201ENST00000415620 IL21Q9HBE4 155 aa7.43□□□□□ -1.22
LINC00428-201ENST00000415620 V9GY48 417 aaPredicted RBP7.43□□□□□ -1.22
LINC00428-201ENST00000415620 PPP1R18Q6NYC8 613 aa7.42□□□□□ -1.22
LINC00428-201ENST00000415620 SAMD7Q7Z3H4 446 aa7.42□□□□□ -1.22
LINC00428-201ENST00000415620 MTRQ99707 1265 aa7.42□□□□□ -1.22
LINC00428-201ENST00000415620 HDGFP51858 240 aaKnown RBP7.41□□□□□ -1.22
LINC00428-201ENST00000415620 TSR1Q2NL82 804 aaKnown RBP7.41□□□□□ -1.22
LINC00428-201ENST00000415620 CDCA7LQ96GN5 454 aa7.41□□□□□ -1.22
LINC00428-201ENST00000415620 CERKQ8TCT0 537 aa7.4□□□□□ -1.22
LINC00428-201ENST00000415620 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.4□□□□□ -1.22
LINC00428-201ENST00000415620 SMAPO00193 183 aa7.39□□□□□ -1.23
LINC00428-201ENST00000415620 PRSS12P56730 875 aa7.39□□□□□ -1.23
LINC00428-201ENST00000415620 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
LINC00428-201ENST00000415620 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
LINC00428-201ENST00000415620 PDIA6Q15084 440 aa7.38□□□□□ -1.23
LINC00428-201ENST00000415620 ZNF787Q6DD87 383 aa7.38□□□□□ -1.23
LINC00428-201ENST00000415620 GGCXP38435 758 aa7.37□□□□□ -1.23
LINC00428-201ENST00000415620 TATDN2Q93075 761 aa7.37□□□□□ -1.23
LINC00428-201ENST00000415620 PNMA3Q9UL41 463 aa7.37□□□□□ -1.23
LINC00428-201ENST00000415620 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
LINC00428-201ENST00000415620 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
LINC00428-201ENST00000415620 RNF40O75150 1001 aa7.35□□□□□ -1.23
LINC00428-201ENST00000415620 BBXQ8WY36 941 aaPredicted RBP7.35□□□□□ -1.23
LINC00428-201ENST00000415620 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
LINC00428-201ENST00000415620 FAM198AQ9UFP1 575 aa7.34□□□□□ -1.23
LINC00428-201ENST00000415620 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
LINC00428-201ENST00000415620 PRIM1P49642 420 aaKnown RBP7.32□□□□□ -1.24
LINC00428-201ENST00000415620 APLP1P51693 650 aa7.32□□□□□ -1.24
LINC00428-201ENST00000415620 NUDT18Q6ZVK8 323 aa7.32□□□□□ -1.24
LINC00428-201ENST00000415620 TMUB1Q9BVT8 246 aa7.32□□□□□ -1.24
LINC00428-201ENST00000415620 GRXCR2A6NFK2 248 aa7.31□□□□□ -1.24
LINC00428-201ENST00000415620 C3orf80F5H4A9 247 aa7.31□□□□□ -1.24
LINC00428-201ENST00000415620 NKX2-3Q8TAU0 364 aa7.31□□□□□ -1.24
LINC00428-201ENST00000415620 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
LINC00428-201ENST00000415620 SLC4A3P48751 1232 aa7.3□□□□□ -1.24
LINC00428-201ENST00000415620 SLF2Q8IX21 1173 aa7.3□□□□□ -1.24
LINC00428-201ENST00000415620 COPS2P61201 443 aa7.29□□□□□ -1.24
LINC00428-201ENST00000415620 ZNF775Q96BV0 537 aaPredicted RBP7.29□□□□□ -1.24
LINC00428-201ENST00000415620 E2F4Q16254 413 aa7.27□□□□□ -1.25
LINC00428-201ENST00000415620 SWT1Q5T5J6 900 aaKnown RBP7.27□□□□□ -1.25
LINC00428-201ENST00000415620 ZPR1O75312 459 aa7.26□□□□□ -1.25
LINC00428-201ENST00000415620 PRR14Q9BWN1 585 aa7.26□□□□□ -1.25
LINC00428-201ENST00000415620 OSBPP22059 807 aa7.25□□□□□ -1.25
LINC00428-201ENST00000415620 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
LINC00428-201ENST00000415620 CDHR5Q9HBB8 845 aa7.25□□□□□ -1.25
LINC00428-201ENST00000415620 SLC19A1P41440 591 aa7.24□□□□□ -1.25
LINC00428-201ENST00000415620 PKDCCQ504Y2 493 aa7.24□□□□□ -1.25
LINC00428-201ENST00000415620 TTC13Q8NBP0 860 aa7.24□□□□□ -1.25
LINC00428-201ENST00000415620 DGAT1O75907 488 aa7.23□□□□□ -1.25
LINC00428-201ENST00000415620 WDR70Q9NW82 654 aa7.23□□□□□ -1.25
LINC00428-201ENST00000415620 PCDHB3Q9Y5E6 796 aa7.23□□□□□ -1.25
LINC00428-201ENST00000415620 PADI6Q6TGC4 694 aa7.22□□□□□ -1.25
LINC00428-201ENST00000415620 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
LINC00428-201ENST00000415620 TRIM67Q6ZTA4 783 aa7.21□□□□□ -1.26
LINC00428-201ENST00000415620 ZNF598Q86UK7 904 aaKnown RBP7.21□□□□□ -1.26
LINC00428-201ENST00000415620 PRR20EP86478 221 aa7.2□□□□□ -1.26
LINC00428-201ENST00000415620 PRR20CP86479 221 aa7.2□□□□□ -1.26
LINC00428-201ENST00000415620 PRR20DP86480 221 aa7.2□□□□□ -1.26
LINC00428-201ENST00000415620 PRR20BP86481 221 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms