RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PDS5BQ9NTI5 1447 aa6.69□□□□□ -1.34
LINC01048-201ENST00000414480 RTN4Q9NQC3 1192 aaKnown RBP6.69□□□□□ -1.34
LINC01048-201ENST00000414480 MRC2Q9UBG0 1479 aa6.68□□□□□ -1.34
LINC01048-201ENST00000414480 ARHGEF11O15085 1522 aa6.68□□□□□ -1.34
LINC01048-201ENST00000414480 PTPREP23469 700 aa6.68□□□□□ -1.34
LINC01048-201ENST00000414480 THSD4Q6ZMP0 1018 aa6.68□□□□□ -1.34
LINC01048-201ENST00000414480 UPF1Q92900 1129 aaKnown RBP eCLIP6.68□□□□□ -1.34
LINC01048-201ENST00000414480 RYDENQ9NUL5 291 aaKnown RBP6.68□□□□□ -1.34
LINC01048-201ENST00000414480 GOLGA8CPA6NN73 597 aa6.67□□□□□ -1.34
LINC01048-201ENST00000414480 FOSBP53539 338 aa6.67□□□□□ -1.34
LINC01048-201ENST00000414480 BHMG1C9JSJ3 638 aaPredicted RBP6.66□□□□□ -1.34
LINC01048-201ENST00000414480 RANGAP1P46060 587 aaPredicted RBP6.66□□□□□ -1.34
LINC01048-201ENST00000414480 PPP1R15BQ5SWA1 713 aa6.66□□□□□ -1.34
LINC01048-201ENST00000414480 CRISPLD2Q9H0B8 497 aa6.66□□□□□ -1.34
LINC01048-201ENST00000414480 A0A0G2JS52 829 aa6.65□□□□□ -1.34
LINC01048-201ENST00000414480 CYB5RLQ6IPT4 315 aa6.65□□□□□ -1.34
LINC01048-201ENST00000414480 MRPL50Q8N5N7 158 aaKnown RBP6.65□□□□□ -1.34
LINC01048-201ENST00000414480 WNT2BQ93097 391 aa6.65□□□□□ -1.34
LINC01048-201ENST00000414480 JPH4Q96JJ6 628 aa6.65□□□□□ -1.34
LINC01048-201ENST00000414480 ZBED2Q9BTP6 218 aa6.65□□□□□ -1.34
LINC01048-201ENST00000414480 CHGAP10645 457 aaKnown RBP6.64□□□□□ -1.35
LINC01048-201ENST00000414480 IRX2Q9BZI1 471 aaPredicted RBP6.64□□□□□ -1.35
LINC01048-201ENST00000414480 NBPF3Q9H094 633 aa6.64□□□□□ -1.35
LINC01048-201ENST00000414480 AMER1Q5JTC6 1135 aaPredicted RBP6.63□□□□□ -1.35
LINC01048-201ENST00000414480 BAZ1BQ9UIG0 1483 aaKnown RBP6.63□□□□□ -1.35
LINC01048-201ENST00000414480 CADPSQ9ULU8 1353 aa6.62□□□□□ -1.35
LINC01048-201ENST00000414480 ZDHHC16Q969W1 377 aa6.62□□□□□ -1.35
LINC01048-201ENST00000414480 ANO8Q9HCE9 1232 aaPredicted RBP6.62□□□□□ -1.35
LINC01048-201ENST00000414480 SMARCA4P51532 1647 aa6.61□□□□□ -1.35
LINC01048-201ENST00000414480 ARAP1Q96P48 1450 aa6.61□□□□□ -1.35
LINC01048-201ENST00000414480 EVI5O60447 810 aa6.61□□□□□ -1.35
LINC01048-201ENST00000414480 PDE4AP27815 886 aa6.61□□□□□ -1.35
LINC01048-201ENST00000414480 NKX1-1Q15270 411 aaPredicted RBP6.6□□□□□ -1.35
LINC01048-201ENST00000414480 ADAM33Q9BZ11 813 aa6.6□□□□□ -1.35
LINC01048-201ENST00000414480 PEG3Q9GZU2 1588 aa6.6□□□□□ -1.35
LINC01048-201ENST00000414480 NCKAP5LQ9HCH0 1330 aa6.59□□□□□ -1.35
LINC01048-201ENST00000414480 PPP1R3GB7ZBB8 358 aa6.58□□□□□ -1.36
LINC01048-201ENST00000414480 ANKK1Q8NFD2 765 aa6.57□□□□□ -1.36
LINC01048-201ENST00000414480 ITGBL1O95965 494 aaPredicted RBP6.56□□□□□ -1.36
LINC01048-201ENST00000414480 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
LINC01048-201ENST00000414480 RABGEF1Q9UJ41 708 aa6.56□□□□□ -1.36
LINC01048-201ENST00000414480 MAP3K9P80192 1104 aa6.55□□□□□ -1.36
LINC01048-201ENST00000414480 ARXQ96QS3 562 aa6.55□□□□□ -1.36
LINC01048-201ENST00000414480 CEP164Q9UPV0 1460 aa6.54□□□□□ -1.36
LINC01048-201ENST00000414480 NYAP1Q6ZVC0 841 aa6.54□□□□□ -1.36
LINC01048-201ENST00000414480 LAPTM4BQ86VI4 370 aa6.54□□□□□ -1.36
LINC01048-201ENST00000414480 MFSD10Q14728 455 aa6.53□□□□□ -1.36
LINC01048-201ENST00000414480 FBXW7Q969H0 707 aa6.53□□□□□ -1.36
LINC01048-201ENST00000414480 LARP6Q9BRS8 491 aaKnown RBP6.53□□□□□ -1.36
LINC01048-201ENST00000414480 URB2Q14146 1524 aaKnown RBP6.53□□□□□ -1.36
LINC01048-201ENST00000414480 ZNF608Q9ULD9 1512 aaPredicted RBP6.53□□□□□ -1.36
LINC01048-201ENST00000414480 PROX2Q3B8N5 592 aa6.52□□□□□ -1.37
LINC01048-201ENST00000414480 PCDHGA10Q9Y5H3 936 aa6.52□□□□□ -1.37
LINC01048-201ENST00000414480 FANCD2Q9BXW9 1451 aa6.52□□□□□ -1.37
LINC01048-201ENST00000414480 SOWAHBA6NEL2 793 aa6.51□□□□□ -1.37
LINC01048-201ENST00000414480 PHF14O94880 888 aa6.51□□□□□ -1.37
LINC01048-201ENST00000414480 COL9A1P20849 921 aa6.51□□□□□ -1.37
LINC01048-201ENST00000414480 BCAMP50895 628 aa6.51□□□□□ -1.37
LINC01048-201ENST00000414480 TYW1BQ6NUM6 668 aa6.51□□□□□ -1.37
LINC01048-201ENST00000414480 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
LINC01048-201ENST00000414480 EMILIN3Q9NT22 766 aa6.5□□□□□ -1.37
LINC01048-201ENST00000414480 GTPBP6O43824 516 aaPredicted RBP6.49□□□□□ -1.37
LINC01048-201ENST00000414480 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
LINC01048-201ENST00000414480 ZFRQ96KR1 1074 aaKnown RBP6.49□□□□□ -1.37
LINC01048-201ENST00000414480 MROH2BQ7Z745 1585 aa6.48□□□□□ -1.37
LINC01048-201ENST00000414480 EIF5BO60841 1220 aaKnown RBP6.48□□□□□ -1.37
LINC01048-201ENST00000414480 Q6ZNB5 142 aa6.48□□□□□ -1.37
LINC01048-201ENST00000414480 KIAA1468Q9P260 1216 aa6.48□□□□□ -1.37
LINC01048-201ENST00000414480 KCNC4Q03721 635 aa6.47□□□□□ -1.37
LINC01048-201ENST00000414480 EPAS1Q99814 870 aa6.47□□□□□ -1.37
LINC01048-201ENST00000414480 CFTRP13569 1480 aa6.47□□□□□ -1.37
LINC01048-201ENST00000414480 WBP1LQ9NX94 342 aa6.46□□□□□ -1.38
LINC01048-201ENST00000414480 LAPTM4AQ15012 233 aa6.45□□□□□ -1.38
LINC01048-201ENST00000414480 FAM98CQ17RN3 349 aaKnown RBP6.45□□□□□ -1.38
LINC01048-201ENST00000414480 SEPT9Q9UHD8 586 aaPredicted RBP6.45□□□□□ -1.38
LINC01048-201ENST00000414480 IFT140Q96RY7 1462 aa6.45□□□□□ -1.38
LINC01048-201ENST00000414480 TRIM6-TRIM34B2RNG4 842 aa6.44□□□□□ -1.38
LINC01048-201ENST00000414480 C6orf132Q5T0Z8 1188 aa6.44□□□□□ -1.38
LINC01048-201ENST00000414480 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.44□□□□□ -1.38
LINC01048-201ENST00000414480 TSR3Q9UJK0 312 aaKnown RBP6.44□□□□□ -1.38
LINC01048-201ENST00000414480 HOMEZQ8IX15 550 aa6.43□□□□□ -1.38
LINC01048-201ENST00000414480 LRCH3Q96II8 777 aa6.43□□□□□ -1.38
LINC01048-201ENST00000414480 HPS5Q9UPZ3 1129 aa6.42□□□□□ -1.38
LINC01048-201ENST00000414480 CHD1O14646 1710 aa6.42□□□□□ -1.38
LINC01048-201ENST00000414480 EIF4G3O43432 1585 aaKnown RBP6.41□□□□□ -1.38
LINC01048-201ENST00000414480 CAMK2BQ13554 666 aa6.41□□□□□ -1.38
LINC01048-201ENST00000414480 TIMELESSQ9UNS1 1208 aa6.41□□□□□ -1.38
LINC01048-201ENST00000414480 CLASP1Q7Z460 1538 aa6.4□□□□□ -1.38
LINC01048-201ENST00000414480 AQRO60306 1485 aaKnown RBP eCLIP6.4□□□□□ -1.39
LINC01048-201ENST00000414480 TULP1O00294 542 aaPredicted RBP6.39□□□□□ -1.39
LINC01048-201ENST00000414480 DPYSL4O14531 572 aa6.39□□□□□ -1.39
LINC01048-201ENST00000414480 CADPS2Q86UW7 1296 aa6.39□□□□□ -1.39
LINC01048-201ENST00000414480 PACS2Q86VP3 889 aa6.38□□□□□ -1.39
LINC01048-201ENST00000414480 RBM33Q96EV2 1170 aaKnown RBP6.38□□□□□ -1.39
LINC01048-201ENST00000414480 TOPBP1Q92547 1522 aa6.36□□□□□ -1.39
LINC01048-201ENST00000414480 GFRA3O60609 400 aa6.36□□□□□ -1.39
LINC01048-201ENST00000414480 PPP4CP60510 307 aa6.36□□□□□ -1.39
LINC01048-201ENST00000414480 EN1Q05925 392 aaPredicted RBP6.36□□□□□ -1.39
LINC01048-201ENST00000414480 DDX12PQ92771 950 aa6.36□□□□□ -1.39
LINC01048-201ENST00000414480 MAP3K7O43318 606 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms