RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
SMC4P1-201ENST00000414479 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
SMC4P1-201ENST00000414479 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
SMC4P1-201ENST00000414479 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
SMC4P1-201ENST00000414479 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
SMC4P1-201ENST00000414479 OATP04181 439 aa13.11□□□□□ -0.31
SMC4P1-201ENST00000414479 MS4A1P11836 297 aa13.11□□□□□ -0.31
SMC4P1-201ENST00000414479 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
SMC4P1-201ENST00000414479 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
SMC4P1-201ENST00000414479 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
SMC4P1-201ENST00000414479 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
SMC4P1-201ENST00000414479 SH3D19Q5HYK7 790 aa13.1□□□□□ -0.31
SMC4P1-201ENST00000414479 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
SMC4P1-201ENST00000414479 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
SMC4P1-201ENST00000414479 TMUB1Q9BVT8 246 aa13.05□□□□□ -0.32
SMC4P1-201ENST00000414479 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
SMC4P1-201ENST00000414479 ATP1B4Q9UN42 357 aaPredicted RBP13.05□□□□□ -0.32
SMC4P1-201ENST00000414479 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
SMC4P1-201ENST00000414479 REPIN1Q9BWE0 567 aaKnown RBP13.03□□□□□ -0.32
SMC4P1-201ENST00000414479 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
SMC4P1-201ENST00000414479 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
SMC4P1-201ENST00000414479 METTL3Q86U44 580 aaKnown RBP13.02□□□□□ -0.33
SMC4P1-201ENST00000414479 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.33
SMC4P1-201ENST00000414479 FOSBP53539 338 aa13.01□□□□□ -0.33
SMC4P1-201ENST00000414479 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
SMC4P1-201ENST00000414479 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
SMC4P1-201ENST00000414479 DOK7Q18PE1 504 aa13□□□□□ -0.33
SMC4P1-201ENST00000414479 BEGAINQ9BUH8 593 aa13□□□□□ -0.33
SMC4P1-201ENST00000414479 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
SMC4P1-201ENST00000414479 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
SMC4P1-201ENST00000414479 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
SMC4P1-201ENST00000414479 PADI6Q6TGC4 694 aa12.98□□□□□ -0.33
SMC4P1-201ENST00000414479 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
SMC4P1-201ENST00000414479 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
SMC4P1-201ENST00000414479 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
SMC4P1-201ENST00000414479 A6NJR5 290 aa12.96□□□□□ -0.33
SMC4P1-201ENST00000414479 PHOX2BQ99453 314 aa12.96□□□□□ -0.33
SMC4P1-201ENST00000414479 ADGRG1Q9Y653 693 aa12.96□□□□□ -0.33
SMC4P1-201ENST00000414479 POTEHQ6S545 545 aa12.95□□□□□ -0.34
SMC4P1-201ENST00000414479 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
SMC4P1-201ENST00000414479 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
SMC4P1-201ENST00000414479 APBB1O00213 710 aa12.92□□□□□ -0.34
SMC4P1-201ENST00000414479 MCM6Q14566 821 aa12.92□□□□□ -0.34
SMC4P1-201ENST00000414479 ARID3AQ99856 593 aa12.92□□□□□ -0.34
SMC4P1-201ENST00000414479 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
SMC4P1-201ENST00000414479 RAD21O60216 631 aa12.91□□□□□ -0.34
SMC4P1-201ENST00000414479 PRSS12P56730 875 aa12.9□□□□□ -0.34
SMC4P1-201ENST00000414479 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
SMC4P1-201ENST00000414479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
SMC4P1-201ENST00000414479 NUDT7P0C024 238 aa12.89□□□□□ -0.35
SMC4P1-201ENST00000414479 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
SMC4P1-201ENST00000414479 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
SMC4P1-201ENST00000414479 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
SMC4P1-201ENST00000414479 CDCA7LQ96GN5 454 aa12.88□□□□□ -0.35
SMC4P1-201ENST00000414479 PPP4R3BQ5MIZ7 849 aa12.87□□□□□ -0.35
SMC4P1-201ENST00000414479 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
SMC4P1-201ENST00000414479 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
SMC4P1-201ENST00000414479 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
SMC4P1-201ENST00000414479 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
SMC4P1-201ENST00000414479 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
SMC4P1-201ENST00000414479 TRAK2O60296 914 aa12.86□□□□□ -0.35
SMC4P1-201ENST00000414479 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
SMC4P1-201ENST00000414479 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
SMC4P1-201ENST00000414479 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
SMC4P1-201ENST00000414479 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
SMC4P1-201ENST00000414479 NLRP7Q8WX94 980 aa12.84□□□□□ -0.35
SMC4P1-201ENST00000414479 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
SMC4P1-201ENST00000414479 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMC4P1-201ENST00000414479 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
SMC4P1-201ENST00000414479 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
SMC4P1-201ENST00000414479 BANK1Q8NDB2 785 aa12.82□□□□□ -0.36
SMC4P1-201ENST00000414479 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
SMC4P1-201ENST00000414479 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
SMC4P1-201ENST00000414479 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
SMC4P1-201ENST00000414479 TMEM259Q4ZIN3 620 aa12.8□□□□□ -0.36
SMC4P1-201ENST00000414479 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
SMC4P1-201ENST00000414479 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
SMC4P1-201ENST00000414479 PPP1R3GB7ZBB8 358 aa12.79□□□□□ -0.36
SMC4P1-201ENST00000414479 PTPREP23469 700 aa12.79□□□□□ -0.36
SMC4P1-201ENST00000414479 DNAJB2P25686 324 aa12.78□□□□□ -0.36
SMC4P1-201ENST00000414479 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
SMC4P1-201ENST00000414479 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
SMC4P1-201ENST00000414479 RCCD1A6NED2 376 aa12.77□□□□□ -0.37
SMC4P1-201ENST00000414479 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
SMC4P1-201ENST00000414479 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
SMC4P1-201ENST00000414479 WWC1Q8IX03 1113 aa12.77□□□□□ -0.37
SMC4P1-201ENST00000414479 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
SMC4P1-201ENST00000414479 RFC5P40937 340 aa12.76□□□□□ -0.37
SMC4P1-201ENST00000414479 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMC4P1-201ENST00000414479 PRM3Q9NNZ6 103 aa12.76□□□□□ -0.37
SMC4P1-201ENST00000414479 TUSC1Q2TAM9 212 aa12.75□□□□□ -0.37
SMC4P1-201ENST00000414479 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
SMC4P1-201ENST00000414479 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
SMC4P1-201ENST00000414479 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
SMC4P1-201ENST00000414479 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
SMC4P1-201ENST00000414479 CD46P15529 392 aa12.74□□□□□ -0.37
SMC4P1-201ENST00000414479 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
SMC4P1-201ENST00000414479 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
SMC4P1-201ENST00000414479 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
SMC4P1-201ENST00000414479 EYA1Q99502 592 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms