RNA–Protein interactions for RNA: ENST00000409078.7

CLASP1-203, Transcript of cytoplasmic linker associated protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLASP1, Length 8,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-203ENST00000409078 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
CLASP1-203ENST00000409078 SUPT16HQ9Y5B9 1047 aaKnown RBP11.22□□□□□ -0.61
CLASP1-203ENST00000409078 IPO7O95373 1038 aaKnown RBP11.21□□□□□ -0.61
CLASP1-203ENST00000409078 C1orf141Q5JVX7 400 aa11.21□□□□□ -0.62
CLASP1-203ENST00000409078 LTV1Q96GA3 475 aaPredicted RBP11.21□□□□□ -0.62
CLASP1-203ENST00000409078 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
CLASP1-203ENST00000409078 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
CLASP1-203ENST00000409078 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
CLASP1-203ENST00000409078 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLASP1-203ENST00000409078 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
CLASP1-203ENST00000409078 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
CLASP1-203ENST00000409078 RDXP35241 583 aaKnown RBP11.19□□□□□ -0.62
CLASP1-203ENST00000409078 ANKRD20A12PQ8NF67 263 aa11.19□□□□□ -0.62
CLASP1-203ENST00000409078 FAM184AQ8NB25 1140 aa11.19□□□□□ -0.62
CLASP1-203ENST00000409078 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
CLASP1-203ENST00000409078 TRIM29Q14134 588 aa11.19□□□□□ -0.62
CLASP1-203ENST00000409078 PPP1R1BQ9UD71 204 aaPredicted RBP11.19□□□□□ -0.62
CLASP1-203ENST00000409078 CPLX2Q6PUV4 134 aaKnown RBP11.18□□□□□ -0.62
CLASP1-203ENST00000409078 CCAR2Q8N163 923 aaKnown RBP11.18□□□□□ -0.62
CLASP1-203ENST00000409078 ZFYVE27Q5T4F4 411 aa11.18□□□□□ -0.62
CLASP1-203ENST00000409078 CCNB3Q8WWL7 1395 aa11.17□□□□□ -0.62
CLASP1-203ENST00000409078 ARID3AQ99856 593 aa11.17□□□□□ -0.62
CLASP1-203ENST00000409078 EIF4G1Q04637 1599 aaKnown RBP11.17□□□□□ -0.62
CLASP1-203ENST00000409078 TERF2IPQ9NYB0 399 aa11.17□□□□□ -0.62
CLASP1-203ENST00000409078 GOLGA6L19H0YKK7 550 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 APPP05067 770 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 GPS2Q13227 327 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 TTC5Q8N0Z6 440 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 RWDD1Q9H446 243 aaPredicted RBP11.16□□□□□ -0.62
CLASP1-203ENST00000409078 SMC4Q9NTJ3 1288 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
CLASP1-203ENST00000409078 EPS15P42566 896 aa11.16□□□□□ -0.62
CLASP1-203ENST00000409078 NOP58Q9Y2X3 529 aaKnown RBP11.16□□□□□ -0.62
CLASP1-203ENST00000409078 PPM1FP49593 454 aaPredicted RBP11.15□□□□□ -0.63
CLASP1-203ENST00000409078 NEXNQ0ZGT2 675 aa11.15□□□□□ -0.63
CLASP1-203ENST00000409078 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
CLASP1-203ENST00000409078 ERICH2A1L162 156 aa11.14□□□□□ -0.63
CLASP1-203ENST00000409078 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
CLASP1-203ENST00000409078 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
CLASP1-203ENST00000409078 ST18O60284 1047 aa11.13□□□□□ -0.63
CLASP1-203ENST00000409078 NOL8Q76FK4 1167 aaKnown RBP11.13□□□□□ -0.63
CLASP1-203ENST00000409078 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
CLASP1-203ENST00000409078 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
CLASP1-203ENST00000409078 TRDNQ13061 729 aa11.12□□□□□ -0.63
CLASP1-203ENST00000409078 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
CLASP1-203ENST00000409078 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
CLASP1-203ENST00000409078 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
CLASP1-203ENST00000409078 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
CLASP1-203ENST00000409078 BECN2A8MW95 431 aa11.11□□□□□ -0.63
CLASP1-203ENST00000409078 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
CLASP1-203ENST00000409078 CDR1P51861 262 aa11.11□□□□□ -0.63
CLASP1-203ENST00000409078 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
CLASP1-203ENST00000409078 PMFBP1Q8TBY8 1022 aa11.1□□□□□ -0.63
CLASP1-203ENST00000409078 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
CLASP1-203ENST00000409078 TEFQ10587 303 aa11.09□□□□□ -0.63
CLASP1-203ENST00000409078 CCDC173Q0VFZ6 552 aa11.09□□□□□ -0.63
CLASP1-203ENST00000409078 ZRSR2Q15696 482 aaKnown RBP11.09□□□□□ -0.63
CLASP1-203ENST00000409078 ATP6V1DQ9Y5K8 247 aa11.09□□□□□ -0.63
CLASP1-203ENST00000409078 NFXL1Q6ZNB6 911 aa11.09□□□□□ -0.63
CLASP1-203ENST00000409078 C9orf78Q9NZ63 289 aaPredicted RBP11.09□□□□□ -0.63
CLASP1-203ENST00000409078 CPLX1O14810 134 aa11.08□□□□□ -0.64
CLASP1-203ENST00000409078 MIER1Q8N108 512 aa11.08□□□□□ -0.64
CLASP1-203ENST00000409078 RUFY1Q96T51 708 aa11.08□□□□□ -0.64
CLASP1-203ENST00000409078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.08□□□□□ -0.648e-7■■□□□ 12.8
CLASP1-203ENST00000409078 RILPL2Q969X0 211 aa11.08□□□□□ -0.64
CLASP1-203ENST00000409078 OFD1O75665 1012 aa11.07□□□□□ -0.64
CLASP1-203ENST00000409078 MFAP1P55081 439 aaKnown RBP11.06□□□□□ -0.64
CLASP1-203ENST00000409078 PSME1Q06323 249 aa11.06□□□□□ -0.64
CLASP1-203ENST00000409078 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
CLASP1-203ENST00000409078 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
CLASP1-203ENST00000409078 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
CLASP1-203ENST00000409078 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
CLASP1-203ENST00000409078 TMEM87AQ8NBN3 555 aa11.05□□□□□ -0.64
CLASP1-203ENST00000409078 AK7Q96M32 723 aa11.05□□□□□ -0.64
CLASP1-203ENST00000409078 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
CLASP1-203ENST00000409078 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
CLASP1-203ENST00000409078 BRMS1Q9HCU9 246 aa11.05□□□□□ -0.64
CLASP1-203ENST00000409078 WDHD1O75717 1129 aaPredicted RBP11.05□□□□□ -0.64
CLASP1-203ENST00000409078 SAFBQ15424 915 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLASP1-203ENST00000409078 ATF3P18847 181 aa11.04□□□□□ -0.64
CLASP1-203ENST00000409078 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
CLASP1-203ENST00000409078 DDX58O95786 925 aaKnown RBP11.04□□□□□ -0.64
CLASP1-203ENST00000409078 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
CLASP1-203ENST00000409078 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
CLASP1-203ENST00000409078 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
CLASP1-203ENST00000409078 SYCP1Q15431 976 aa11.04□□□□□ -0.64
CLASP1-203ENST00000409078 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
CLASP1-203ENST00000409078 TRIM21P19474 475 aaKnown RBP11.03□□□□□ -0.64
CLASP1-203ENST00000409078 HOMER1Q86YM7 354 aa11.03□□□□□ -0.64
CLASP1-203ENST00000409078 FYB1O15117 783 aa11.03□□□□□ -0.64
CLASP1-203ENST00000409078 CARMIL2Q6F5E8 1435 aa11.03□□□□□ -0.64
CLASP1-203ENST00000409078 FOXD4L5Q5VV16 416 aaPredicted RBP11.02□□□□□ -0.64
CLASP1-203ENST00000409078 FOXD4L4Q8WXT5 416 aaPredicted RBP11.02□□□□□ -0.64
CLASP1-203ENST00000409078 XBP1P17861 261 aa11.02□□□□□ -0.65
CLASP1-203ENST00000409078 ZKSCAN1P17029 563 aaPredicted RBP11.01□□□□□ -0.65
CLASP1-203ENST00000409078 MAP7D2Q96T17 732 aa11.01□□□□□ -0.65
CLASP1-203ENST00000409078 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
CLASP1-203ENST00000409078 DCTN1Q14203 1278 aa11.01□□□□□ -0.65
CLASP1-203ENST00000409078 NEFHP12036 1026 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms