RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 PANK3Q9H999 370 aa16.85■□□□□ 0.29
ATG9A-203ENST00000409033 WASHC2CQ9Y4E1 1318 aa16.84■□□□□ 0.29
ATG9A-203ENST00000409033 STK26Q9P289 416 aa16.84■□□□□ 0.29
ATG9A-203ENST00000409033 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
ATG9A-203ENST00000409033 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
ATG9A-203ENST00000409033 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
ATG9A-203ENST00000409033 TRAK1Q9UPV9 953 aa16.82■□□□□ 0.28
ATG9A-203ENST00000409033 ESF1Q9H501 851 aaKnown RBP16.8■□□□□ 0.28
ATG9A-203ENST00000409033 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATG9A-203ENST00000409033 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
ATG9A-203ENST00000409033 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
ATG9A-203ENST00000409033 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
ATG9A-203ENST00000409033 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
ATG9A-203ENST00000409033 ABCC2Q92887 1545 aa16.77■□□□□ 0.28
ATG9A-203ENST00000409033 ARID4BQ4LE39 1312 aaPredicted RBP16.77■□□□□ 0.27
ATG9A-203ENST00000409033 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.27
ATG9A-203ENST00000409033 TTC37Q6PGP7 1564 aa16.76■□□□□ 0.27
ATG9A-203ENST00000409033 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
ATG9A-203ENST00000409033 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
ATG9A-203ENST00000409033 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
ATG9A-203ENST00000409033 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
ATG9A-203ENST00000409033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATG9A-203ENST00000409033 PLCH2O75038 1416 aa16.74■□□□□ 0.27
ATG9A-203ENST00000409033 FAM135AQ9P2D6 1515 aa16.74■□□□□ 0.27
ATG9A-203ENST00000409033 FANCAO15360 1455 aa16.74■□□□□ 0.27
ATG9A-203ENST00000409033 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
ATG9A-203ENST00000409033 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
ATG9A-203ENST00000409033 TSHZ2Q9NRE2 1034 aa16.73■□□□□ 0.27
ATG9A-203ENST00000409033 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
ATG9A-203ENST00000409033 ASXL2Q76L83 1435 aa16.71■□□□□ 0.27
ATG9A-203ENST00000409033 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.27
ATG9A-203ENST00000409033 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
ATG9A-203ENST00000409033 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
ATG9A-203ENST00000409033 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
ATG9A-203ENST00000409033 RALBP1Q15311 655 aa16.68■□□□□ 0.26
ATG9A-203ENST00000409033 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
ATG9A-203ENST00000409033 ARHGEF12Q9NZN5 1544 aa16.67■□□□□ 0.26
ATG9A-203ENST00000409033 CD109Q6YHK3 1445 aa16.67■□□□□ 0.26
ATG9A-203ENST00000409033 ADGBQ8N7X0 1667 aa16.67■□□□□ 0.26
ATG9A-203ENST00000409033 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
ATG9A-203ENST00000409033 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
ATG9A-203ENST00000409033 PPM1GO15355 546 aaPredicted RBP16.66■□□□□ 0.26
ATG9A-203ENST00000409033 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
ATG9A-203ENST00000409033 POGKQ9P215 609 aa16.66■□□□□ 0.26
ATG9A-203ENST00000409033 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
ATG9A-203ENST00000409033 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
ATG9A-203ENST00000409033 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
ATG9A-203ENST00000409033 WDR7Q9Y4E6 1490 aa16.65■□□□□ 0.26
ATG9A-203ENST00000409033 DISP3Q9P2K9 1392 aa16.65■□□□□ 0.26
ATG9A-203ENST00000409033 ADGRF5Q8IZF2 1346 aa16.65■□□□□ 0.26
ATG9A-203ENST00000409033 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
ATG9A-203ENST00000409033 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
ATG9A-203ENST00000409033 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
ATG9A-203ENST00000409033 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
ATG9A-203ENST00000409033 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
ATG9A-203ENST00000409033 PLIN1O60240 522 aa16.62■□□□□ 0.25
ATG9A-203ENST00000409033 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
ATG9A-203ENST00000409033 ERBINQ96RT1 1412 aa16.61■□□□□ 0.25
ATG9A-203ENST00000409033 CDC42BPBQ9Y5S2 1711 aa16.61■□□□□ 0.25
ATG9A-203ENST00000409033 ZCCHC11Q5TAX3 1644 aaKnown RBP16.6■□□□□ 0.25
ATG9A-203ENST00000409033 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
ATG9A-203ENST00000409033 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
ATG9A-203ENST00000409033 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
ATG9A-203ENST00000409033 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
ATG9A-203ENST00000409033 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
ATG9A-203ENST00000409033 RALGAPBQ86X10 1494 aa16.59■□□□□ 0.25
ATG9A-203ENST00000409033 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
ATG9A-203ENST00000409033 MINK1Q8N4C8 1332 aaPredicted RBP16.58■□□□□ 0.25
ATG9A-203ENST00000409033 DUOX2Q9NRD8 1548 aa16.58■□□□□ 0.25
ATG9A-203ENST00000409033 A2MP01023 1474 aa16.58■□□□□ 0.24
ATG9A-203ENST00000409033 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
ATG9A-203ENST00000409033 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
ATG9A-203ENST00000409033 RRP7AQ9Y3A4 280 aaKnown RBP16.58■□□□□ 0.24
ATG9A-203ENST00000409033 RBM19Q9Y4C8 960 aaKnown RBP16.58■□□□□ 0.24
ATG9A-203ENST00000409033 SLC12A5Q9H2X9 1139 aa16.56■□□□□ 0.24
ATG9A-203ENST00000409033 RCAN3Q9UKA8 241 aa16.56■□□□□ 0.24
ATG9A-203ENST00000409033 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
ATG9A-203ENST00000409033 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
ATG9A-203ENST00000409033 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
ATG9A-203ENST00000409033 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
ATG9A-203ENST00000409033 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
ATG9A-203ENST00000409033 TESK2Q96S53 571 aa16.55■□□□□ 0.24
ATG9A-203ENST00000409033 SOX12O15370 315 aa16.55■□□□□ 0.24
ATG9A-203ENST00000409033 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
ATG9A-203ENST00000409033 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
ATG9A-203ENST00000409033 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
ATG9A-203ENST00000409033 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
ATG9A-203ENST00000409033 CROCC2H7BZ55 1655 aa16.53■□□□□ 0.24
ATG9A-203ENST00000409033 APAF1O14727 1248 aa16.51■□□□□ 0.23
ATG9A-203ENST00000409033 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
ATG9A-203ENST00000409033 UGGT1Q9NYU2 1555 aa16.5■□□□□ 0.23
ATG9A-203ENST00000409033 PPP2R1AP30153 589 aa16.5■□□□□ 0.23
ATG9A-203ENST00000409033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATG9A-203ENST00000409033 NOS1P29475 1434 aa16.49■□□□□ 0.23
ATG9A-203ENST00000409033 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
ATG9A-203ENST00000409033 VGFO15240 615 aaPredicted RBP16.49■□□□□ 0.23
ATG9A-203ENST00000409033 IDI1Q13907 227 aa16.49■□□□□ 0.23
ATG9A-203ENST00000409033 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
ATG9A-203ENST00000409033 BCORL1Q5H9F3 1711 aa16.48■□□□□ 0.23
ATG9A-203ENST00000409033 ABCC1P33527 1531 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms