RNA–Protein interactions for RNA: ENST00000408742.1

MIR548N-201, Transcript of microRNA 548n, humanhuman

BASIC

Gene MIR548N, Length 75 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548N-201ENST00000408742 KANK3Q6NY19 840 aa0.81□□□□□ -2.28
MIR548N-201ENST00000408742 FOXD4L3Q6VB84 417 aaPredicted RBP0.81□□□□□ -2.28
MIR548N-201ENST00000408742 TMEM106CQ9BVX2 250 aa0.81□□□□□ -2.28
MIR548N-201ENST00000408742 L3MBTL3Q96JM7 780 aaPredicted RBP0.8□□□□□ -2.28
MIR548N-201ENST00000408742 KRTAP4-3Q9BYR4 195 aa0.8□□□□□ -2.28
MIR548N-201ENST00000408742 ZSWIM6Q9HCJ5 1215 aa0.8□□□□□ -2.28
MIR548N-201ENST00000408742 NXF1Q9UBU9 619 aaKnown RBP0.8□□□□□ -2.28
MIR548N-201ENST00000408742 ARHGAP33O14559 1287 aa0.79□□□□□ -2.28
MIR548N-201ENST00000408742 NPM1P06748 294 aaKnown RBP eCLIP0.79□□□□□ -2.28
MIR548N-201ENST00000408742 BUD31P41223 144 aaPredicted RBP0.79□□□□□ -2.28
MIR548N-201ENST00000408742 ARTNQ5T4W7 220 aa0.79□□□□□ -2.28
MIR548N-201ENST00000408742 PDCD7Q8N8D1 485 aaKnown RBP0.79□□□□□ -2.28
MIR548N-201ENST00000408742 WNT2BQ93097 391 aa0.79□□□□□ -2.28
MIR548N-201ENST00000408742 OBSCNQ5VST9 7968 aa0.79□□□□□ -2.28
MIR548N-201ENST00000408742 PSEN2P49810 448 aa0.78□□□□□ -2.28
MIR548N-201ENST00000408742 PPP1R18Q6NYC8 613 aa0.78□□□□□ -2.28
MIR548N-201ENST00000408742 TNFRSF10AO00220 468 aa0.77□□□□□ -2.29
MIR548N-201ENST00000408742 PRRG2O14669 202 aa0.77□□□□□ -2.29
MIR548N-201ENST00000408742 AXIN1O15169 862 aa0.77□□□□□ -2.29
MIR548N-201ENST00000408742 ZNF865P0CJ78 1059 aaPredicted RBP0.77□□□□□ -2.29
MIR548N-201ENST00000408742 FBLN7Q53RD9 439 aa0.77□□□□□ -2.29
MIR548N-201ENST00000408742 DCAF5Q96JK2 942 aa0.77□□□□□ -2.29
MIR548N-201ENST00000408742 NCANO14594 1321 aa0.77□□□□□ -2.29
MIR548N-201ENST00000408742 H3BM21 787 aa0.76□□□□□ -2.29
MIR548N-201ENST00000408742 MNX1P50219 401 aaPredicted RBP0.76□□□□□ -2.29
MIR548N-201ENST00000408742 CRIPAKQ8N1N5 446 aa0.76□□□□□ -2.29
MIR548N-201ENST00000408742 TRIM47Q96LD4 638 aa0.76□□□□□ -2.29
MIR548N-201ENST00000408742 CSRNP1Q96S65 589 aa0.76□□□□□ -2.29
MIR548N-201ENST00000408742 SEMA6BQ9H3T3 888 aa0.76□□□□□ -2.29
MIR548N-201ENST00000408742 GOLGA8CPA6NN73 597 aa0.75□□□□□ -2.29
MIR548N-201ENST00000408742 KRTAP10-9P60411 292 aa0.75□□□□□ -2.29
MIR548N-201ENST00000408742 NTN5Q8WTR8 489 aaPredicted RBP0.75□□□□□ -2.29
MIR548N-201ENST00000408742 OVOL3O00110 214 aa0.74□□□□□ -2.29
MIR548N-201ENST00000408742 MARSP56192 900 aaKnown RBP0.74□□□□□ -2.29
MIR548N-201ENST00000408742 PRR20EP86478 221 aa0.74□□□□□ -2.29
MIR548N-201ENST00000408742 PRR20CP86479 221 aa0.74□□□□□ -2.29
MIR548N-201ENST00000408742 PRR20DP86480 221 aa0.74□□□□□ -2.29
MIR548N-201ENST00000408742 PRR20BP86481 221 aa0.74□□□□□ -2.29
MIR548N-201ENST00000408742 PRR20AP86496 221 aa0.74□□□□□ -2.29
MIR548N-201ENST00000408742 COL17A1Q9UMD9 1497 aaPredicted RBP0.73□□□□□ -2.29
MIR548N-201ENST00000408742 B8ZZF3 427 aa0.73□□□□□ -2.29
MIR548N-201ENST00000408742 ATP13A2Q9NQ11 1180 aa0.73□□□□□ -2.29
MIR548N-201ENST00000408742 LHX6Q9UPM6 363 aa0.73□□□□□ -2.29
MIR548N-201ENST00000408742 RNF114Q9Y508 228 aa0.73□□□□□ -2.29
MIR548N-201ENST00000408742 NPAS3Q8IXF0 933 aa0.72□□□□□ -2.29
MIR548N-201ENST00000408742 EIF4ENIF1Q9NRA8 985 aaKnown RBP0.72□□□□□ -2.29
MIR548N-201ENST00000408742 PCDHB13Q9Y5F0 798 aa0.72□□□□□ -2.29
MIR548N-201ENST00000408742 GSC2O15499 205 aa0.71□□□□□ -2.3
MIR548N-201ENST00000408742 NUDT7P0C024 238 aa0.71□□□□□ -2.3
MIR548N-201ENST00000408742 ZNF385CQ66K41 422 aaPredicted RBP0.71□□□□□ -2.3
MIR548N-201ENST00000408742 SPOCD1Q6ZMY3 1216 aa0.71□□□□□ -2.3
MIR548N-201ENST00000408742 SVOPQ8N4V2 548 aa0.71□□□□□ -2.3
MIR548N-201ENST00000408742 EMID1Q96A84 441 aaPredicted RBP0.71□□□□□ -2.3
MIR548N-201ENST00000408742 SCARF2Q96GP6 870 aaPredicted RBP0.71□□□□□ -2.3
MIR548N-201ENST00000408742 SUV39H1O43463 412 aa0.7□□□□□ -2.3
MIR548N-201ENST00000408742 GDF9O60383 454 aa0.7□□□□□ -2.3
MIR548N-201ENST00000408742 IGHA2P01877 340 aa0.7□□□□□ -2.3
MIR548N-201ENST00000408742 IFNL1Q8IU54 200 aa0.7□□□□□ -2.3
MIR548N-201ENST00000408742 SENP2Q9HC62 589 aa0.7□□□□□ -2.3
MIR548N-201ENST00000408742 VPS9D1Q9Y2B5 631 aa0.7□□□□□ -2.3
MIR548N-201ENST00000408742 ARHGEF15O94989 841 aa0.69□□□□□ -2.3
MIR548N-201ENST00000408742 AVPP01185 164 aa0.69□□□□□ -2.3
MIR548N-201ENST00000408742 BCAMP50895 628 aa0.69□□□□□ -2.3
MIR548N-201ENST00000408742 FBLN2P98095 1184 aa0.69□□□□□ -2.3
MIR548N-201ENST00000408742 WHAMMQ8TF30 809 aa0.69□□□□□ -2.3
MIR548N-201ENST00000408742 NAF1Q96HR8 494 aaKnown RBP0.69□□□□□ -2.3
MIR548N-201ENST00000408742 NPM3O75607 178 aaKnown RBP0.68□□□□□ -2.3
MIR548N-201ENST00000408742 SLC19A1P41440 591 aa0.68□□□□□ -2.3
MIR548N-201ENST00000408742 TTC13Q8NBP0 860 aa0.68□□□□□ -2.3
MIR548N-201ENST00000408742 CNTNAP5Q8WYK1 1306 aa0.67□□□□□ -2.3
MIR548N-201ENST00000408742 BHMG1C9JSJ3 638 aaPredicted RBP0.67□□□□□ -2.3
MIR548N-201ENST00000408742 HYAL3O43820 417 aaPredicted RBP0.67□□□□□ -2.3
MIR548N-201ENST00000408742 SMCPP49901 116 aaPredicted RBP0.67□□□□□ -2.3
MIR548N-201ENST00000408742 CTC1Q2NKJ3 1217 aa0.67□□□□□ -2.3
MIR548N-201ENST00000408742 ZNF697Q5TEC3 545 aa0.67□□□□□ -2.3
MIR548N-201ENST00000408742 SPRYD7Q5W111 196 aa0.67□□□□□ -2.3
MIR548N-201ENST00000408742 LILRA6Q6PI73 481 aa0.67□□□□□ -2.3
MIR548N-201ENST00000408742 ZNF598Q86UK7 904 aaKnown RBP0.67□□□□□ -2.3
MIR548N-201ENST00000408742 MRPL50Q8N5N7 158 aaKnown RBP0.67□□□□□ -2.3
MIR548N-201ENST00000408742 ACSS3Q9H6R3 686 aa0.67□□□□□ -2.3
MIR548N-201ENST00000408742 KRBA1A5PL33 1030 aa0.66□□□□□ -2.3
MIR548N-201ENST00000408742 KRT76Q01546 638 aa0.66□□□□□ -2.3
MIR548N-201ENST00000408742 KIFC2Q96AC6 838 aa0.66□□□□□ -2.3
MIR548N-201ENST00000408742 CNTNAP3BQ96NU0 1288 aa0.66□□□□□ -2.3
MIR548N-201ENST00000408742 CNTNAP3Q9BZ76 1288 aa0.66□□□□□ -2.3
MIR548N-201ENST00000408742 BOLA1Q9Y3E2 137 aa0.66□□□□□ -2.3
MIR548N-201ENST00000408742 G3V3G9 751 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 ONECUT2O95948 504 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 C8AP07357 584 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 VSIG8P0DPA2 414 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 TAL1P17542 331 aaPredicted RBP0.65□□□□□ -2.31
MIR548N-201ENST00000408742 HNRNPA0Q13151 305 aaKnown RBP0.65□□□□□ -2.31
MIR548N-201ENST00000408742 MKRN4PQ13434 485 aaPredicted RBP0.65□□□□□ -2.31
MIR548N-201ENST00000408742 DOC2BQ14184 412 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 DCAF8Q5TAQ9 597 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 TMEM92Q6UXU6 159 aa0.65□□□□□ -2.31
MIR548N-201ENST00000408742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP0.65□□□□□ -2.31
MIR548N-201ENST00000408742 KRTAP10-6P60371 365 aaPredicted RBP0.64□□□□□ -2.31
MIR548N-201ENST00000408742 LRP8Q14114 963 aa0.64□□□□□ -2.31
MIR548N-201ENST00000408742 KCNK17Q96T54 332 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms