RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PLEKHD1A6NEE1 506 aa7.98□□□□□ -1.13
HDAC9-203ENST00000406072 NOP58Q9Y2X3 529 aaKnown RBP7.98□□□□□ -1.13
HDAC9-203ENST00000406072 SYCP2Q9BX26 1530 aa7.98□□□□□ -1.13
HDAC9-203ENST00000406072 ARHGAP5Q13017 1502 aa7.98□□□□□ -1.13
HDAC9-203ENST00000406072 MLH3Q9UHC1 1453 aa7.98□□□□□ -1.13
HDAC9-203ENST00000406072 HECW2Q9P2P5 1572 aa7.98□□□□□ -1.13
HDAC9-203ENST00000406072 LMTK2Q8IWU2 1503 aa7.97□□□□□ -1.13
HDAC9-203ENST00000406072 ARHGEF12Q9NZN5 1544 aa7.97□□□□□ -1.13
HDAC9-203ENST00000406072 KIDINS220Q9ULH0 1771 aa7.97□□□□□ -1.13
HDAC9-203ENST00000406072 ERICH6BQ5W0A0 696 aa7.97□□□□□ -1.13
HDAC9-203ENST00000406072 ARXQ96QS3 562 aa7.97□□□□□ -1.13
HDAC9-203ENST00000406072 TEX14Q8IWB6 1497 aa7.96□□□□□ -1.13
HDAC9-203ENST00000406072 PRDM15P57071 1507 aaPredicted RBP7.96□□□□□ -1.13
HDAC9-203ENST00000406072 NCOA1Q15788 1441 aa7.96□□□□□ -1.14
HDAC9-203ENST00000406072 ATP7AQ04656 1500 aa7.95□□□□□ -1.14
HDAC9-203ENST00000406072 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
HDAC9-203ENST00000406072 ZNF518AQ6AHZ1 1483 aa7.95□□□□□ -1.14
HDAC9-203ENST00000406072 FANCAO15360 1455 aa7.95□□□□□ -1.14
HDAC9-203ENST00000406072 MROH1Q8NDA8 1641 aa7.94□□□□□ -1.14
HDAC9-203ENST00000406072 ATP10AO60312 1499 aa7.94□□□□□ -1.14
HDAC9-203ENST00000406072 C9orf84Q5VXU9 1444 aa7.94□□□□□ -1.14
HDAC9-203ENST00000406072 KDM6BO15054 1643 aa7.94□□□□□ -1.14
HDAC9-203ENST00000406072 AGLP35573 1532 aa7.94□□□□□ -1.14
HDAC9-203ENST00000406072 LAS1LQ9Y4W2 734 aaKnown RBP7.93□□□□□ -1.14
HDAC9-203ENST00000406072 TET3O43151 1660 aa7.92□□□□□ -1.14
HDAC9-203ENST00000406072 ABCA6Q8N139 1617 aa7.92□□□□□ -1.14
HDAC9-203ENST00000406072 DENND4BO75064 1496 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-203ENST00000406072 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
HDAC9-203ENST00000406072 DHX57Q6P158 1386 aaKnown RBP7.91□□□□□ -1.14
HDAC9-203ENST00000406072 NAP1L5Q96NT1 182 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-203ENST00000406072 ARHGEF40Q8TER5 1519 aa7.91□□□□□ -1.14
HDAC9-203ENST00000406072 ANKRD30AQ9BXX3 1397 aa7.91□□□□□ -1.14
HDAC9-203ENST00000406072 SALL2Q9Y467 1007 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-203ENST00000406072 ADGRL1O94910 1474 aa7.9□□□□□ -1.14
HDAC9-203ENST00000406072 RAB3GAP2Q9H2M9 1393 aa7.9□□□□□ -1.14
HDAC9-203ENST00000406072 CD109Q6YHK3 1445 aa7.9□□□□□ -1.15
HDAC9-203ENST00000406072 PZPP20742 1482 aa7.9□□□□□ -1.15
HDAC9-203ENST00000406072 MROH2AA6NES4 1674 aa7.89□□□□□ -1.15
HDAC9-203ENST00000406072 VSIG10Q8N0Z9 540 aa7.89□□□□□ -1.15
HDAC9-203ENST00000406072 PPM1GO15355 546 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-203ENST00000406072 KDM5AP29375 1690 aaKnown RBP7.88□□□□□ -1.15
HDAC9-203ENST00000406072 FAM9BQ8IZU0 186 aa7.88□□□□□ -1.15
HDAC9-203ENST00000406072 TIMELESSQ9UNS1 1208 aa7.88□□□□□ -1.15
HDAC9-203ENST00000406072 CFDP1Q9UEE9 299 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-203ENST00000406072 CEP152O94986 1710 aa7.87□□□□□ -1.15
HDAC9-203ENST00000406072 EFCAB2Q5VUJ9 269 aa7.87□□□□□ -1.15
HDAC9-203ENST00000406072 RPRD2Q5VT52 1461 aaKnown RBP7.87□□□□□ -1.15
HDAC9-203ENST00000406072 LAMC1P11047 1609 aa7.87□□□□□ -1.15
HDAC9-203ENST00000406072 PKNOX2Q96KN3 472 aa7.87□□□□□ -1.15
HDAC9-203ENST00000406072 TRAPPC8Q9Y2L5 1435 aa7.87□□□□□ -1.15
HDAC9-203ENST00000406072 PIK3C2BO00750 1634 aa7.86□□□□□ -1.15
HDAC9-203ENST00000406072 SPHKAPQ2M3C7 1700 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 PPP4R2Q9NY27 417 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 ANKRD50Q9ULJ7 1429 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 TRPM2O94759 1503 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 IFT172Q9UG01 1749 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 E9PCH4 1651 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 EFCAB6Q5THR3 1501 aa7.85□□□□□ -1.15
HDAC9-203ENST00000406072 ANP32BQ92688 251 aaKnown RBP7.85□□□□□ -1.15
HDAC9-203ENST00000406072 CAMSAP1Q5T5Y3 1602 aa7.84□□□□□ -1.15
HDAC9-203ENST00000406072 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-203ENST00000406072 NPM1P06748 294 aaKnown RBP eCLIP7.84□□□□□ -1.16
HDAC9-203ENST00000406072 ARHGAP31Q2M1Z3 1444 aa7.83□□□□□ -1.16
HDAC9-203ENST00000406072 FAM50AQ14320 339 aaKnown RBP7.83□□□□□ -1.16
HDAC9-203ENST00000406072 PTPRTO14522 1441 aa7.83□□□□□ -1.16
HDAC9-203ENST00000406072 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
HDAC9-203ENST00000406072 DHX29Q7Z478 1369 aaKnown RBP7.83□□□□□ -1.16
HDAC9-203ENST00000406072 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-203ENST00000406072 KIF15Q9NS87 1388 aa7.82□□□□□ -1.16
HDAC9-203ENST00000406072 SCAPERQ9BY12 1400 aa7.82□□□□□ -1.16
HDAC9-203ENST00000406072 KCNA4P22459 653 aa7.82□□□□□ -1.16
HDAC9-203ENST00000406072 ARID4BQ4LE39 1312 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-203ENST00000406072 A2MP01023 1474 aa7.82□□□□□ -1.16
HDAC9-203ENST00000406072 POLR1AO95602 1720 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-203ENST00000406072 PODXL2Q9NZ53 605 aa7.81□□□□□ -1.16
HDAC9-203ENST00000406072 TNNT2P45379 298 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-203ENST00000406072 HSP90AA1P07900 732 aaKnown RBP7.8□□□□□ -1.16
HDAC9-203ENST00000406072 DDRGK1Q96HY6 314 aa7.8□□□□□ -1.16
HDAC9-203ENST00000406072 SIGLEC1Q9BZZ2 1709 aa7.8□□□□□ -1.16
HDAC9-203ENST00000406072 ZNF644Q9H582 1327 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-203ENST00000406072 FANCIQ9NVI1 1328 aa7.8□□□□□ -1.16
HDAC9-203ENST00000406072 TRIM44Q96DX7 344 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-203ENST00000406072 ABCC3O15438 1527 aa7.8□□□□□ -1.16
HDAC9-203ENST00000406072 ANKRD30BQ9BXX2 1392 aa7.79□□□□□ -1.16
HDAC9-203ENST00000406072 IL27Q8NEV9 243 aa7.79□□□□□ -1.16
HDAC9-203ENST00000406072 RSPH6AQ9H0K4 717 aa7.79□□□□□ -1.16
HDAC9-203ENST00000406072 PPP6R1Q9UPN7 881 aa7.79□□□□□ -1.16
HDAC9-203ENST00000406072 UHRF1BP1Q6BDS2 1440 aa7.79□□□□□ -1.16
HDAC9-203ENST00000406072 HSP90AA2PQ14568 343 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-203ENST00000406072 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
HDAC9-203ENST00000406072 AEBP2Q6ZN18 517 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-203ENST00000406072 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
HDAC9-203ENST00000406072 SPATA31D1Q6ZQQ2 1576 aa7.77□□□□□ -1.17
HDAC9-203ENST00000406072 PREX1Q8TCU6 1659 aa7.77□□□□□ -1.17
HDAC9-203ENST00000406072 ADGRB3O60242 1522 aa7.77□□□□□ -1.17
HDAC9-203ENST00000406072 A0A0U1RQG5 324 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-203ENST00000406072 IPO9Q96P70 1041 aaKnown RBP7.76□□□□□ -1.17
HDAC9-203ENST00000406072 PNNQ9H307 717 aaKnown RBP7.76□□□□□ -1.17
HDAC9-203ENST00000406072 NRXN1Q9ULB1 1477 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms