RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 CDR1P51861 262 aa9.73□□□□□ -0.85
RBFOX2-205ENST00000405409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■■■■ 214.3
RBFOX2-205ENST00000405409 DDX49Q9Y6V7 483 aaKnown RBP9.73□□□□□ -0.85
RBFOX2-205ENST00000405409 GSE1Q14687 1217 aa9.73□□□□□ -0.85
RBFOX2-205ENST00000405409 MORC1Q86VD1 984 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 CWC15Q9P013 229 aaKnown RBP9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 KCNH8Q96L42 1107 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 G3V3G9 751 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 FAM184AQ8NB25 1140 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 SKIDA1Q1XH10 827 aa9.72□□□□□ -0.85
RBFOX2-205ENST00000405409 NAP1L1P55209 391 aaKnown RBP9.71□□□□□ -0.85
RBFOX2-205ENST00000405409 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.85
RBFOX2-205ENST00000405409 TMF1P82094 1093 aa9.71□□□□□ -0.85
RBFOX2-205ENST00000405409 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.85
RBFOX2-205ENST00000405409 CNKSR2Q8WXI2 1034 aa9.71□□□□□ -0.86
RBFOX2-205ENST00000405409 BAZ1BQ9UIG0 1483 aaKnown RBP9.71□□□□□ -0.86
RBFOX2-205ENST00000405409 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.86
RBFOX2-205ENST00000405409 ARGLU1Q9NWB6 273 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-205ENST00000405409 SKOR2Q2VWA4 1001 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-205ENST00000405409 IPO7O95373 1038 aaKnown RBP9.7□□□□□ -0.86
RBFOX2-205ENST00000405409 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
RBFOX2-205ENST00000405409 KIF3AQ9Y496 699 aa9.7□□□□□ -0.86
RBFOX2-205ENST00000405409 FBXW7Q969H0 707 aa9.7□□□□□ -0.86
RBFOX2-205ENST00000405409 MCTP1Q6DN14 999 aa9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 SRPK2P78362 688 aaKnown RBP9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 DHX37Q8IY37 1157 aaKnown RBP9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 TCEAL9Q9UHQ7 104 aa9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 HSP90B2PQ58FF3 399 aa9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 MNS1Q8NEH6 495 aa9.69□□□□□ -0.86
RBFOX2-205ENST00000405409 SLC4A3P48751 1232 aa9.68□□□□□ -0.86
RBFOX2-205ENST00000405409 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-205ENST00000405409 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-205ENST00000405409 HSP90AB2PQ58FF8 381 aa9.67□□□□□ -0.86
RBFOX2-205ENST00000405409 SIN3AQ96ST3 1273 aa9.67□□□□□ -0.86
RBFOX2-205ENST00000405409 SLC4A10Q6U841 1118 aa9.67□□□□□ -0.86
RBFOX2-205ENST00000405409 ANKRD20A12PQ8NF67 263 aa9.67□□□□□ -0.86
RBFOX2-205ENST00000405409 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
RBFOX2-205ENST00000405409 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
RBFOX2-205ENST00000405409 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 CCDC66A2RUB6 948 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 ODF2Q5BJF6 829 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 CAGE1Q8TC20 777 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 RILPL2Q969X0 211 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 SMC4Q9NTJ3 1288 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 R3HCC1Q9Y3T6 440 aaKnown RBP9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 CT47A1Q5JQC4 288 aaPredicted RBP9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 FAM43AQ8N2R8 423 aa9.66□□□□□ -0.86
RBFOX2-205ENST00000405409 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 TSPYL1Q9H0U9 437 aa9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 CCDC47Q96A33 483 aaKnown RBP9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 ATP6V1DQ9Y5K8 247 aa9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 KTN1Q86UP2 1357 aaKnown RBP9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
RBFOX2-205ENST00000405409 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 RSF1Q96T23 1441 aaPredicted RBP9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 STK31Q9BXU1 1019 aa9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 RAD21O60216 631 aa9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 MEX3CQ5U5Q3 659 aaKnown RBP9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
RBFOX2-205ENST00000405409 HOOK1Q9UJC3 728 aaKnown RBP9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 TRIM29Q14134 588 aa9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 CEP164Q9UPV0 1460 aa9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 CCER2I3L3R5 266 aa9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 TTLL5Q6EMB2 1281 aa9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 PAK3O75914 559 aaPredicted RBP9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 ZRSR2Q15696 482 aaKnown RBP9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 ZFYVE27Q5T4F4 411 aa9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 ZCCHC6Q5VYS8 1495 aaKnown RBP9.63□□□□□ -0.87
RBFOX2-205ENST00000405409 SASS6Q6UVJ0 657 aa9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 SYNE3Q6ZMZ3 975 aa9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 BICD2Q8TD16 824 aa9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 ERCC4Q92889 916 aaPredicted RBP9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 SPAG9O60271 1321 aaKnown RBP9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 DCAF11Q8TEB1 546 aa9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 PDILTQ8N807 584 aa9.62□□□□□ -0.87
RBFOX2-205ENST00000405409 CLIP1P30622 1438 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 CLUAP1Q96AJ1 413 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 LMTK3Q96Q04 1460 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 FOSBP53539 338 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 CCDC173Q0VFZ6 552 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 NEXNQ0ZGT2 675 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 MYO6Q9UM54 1294 aa9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
RBFOX2-205ENST00000405409 EPS15P42566 896 aa9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 HDGFL2Q7Z4V5 671 aaPredicted RBP9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 DIAPH3Q9NSV4 1193 aa9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 RBM10P98175 930 aaKnown RBP9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 DYDC1Q8WWB3 177 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms