RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SLAIN1Q8ND83 568 aa8.02□□□□□ -1.13
HMGB1P17-201ENST00000403495 FAM117AQ9C073 453 aa8.02□□□□□ -1.13
HMGB1P17-201ENST00000403495 EPAS1Q99814 870 aa8.01□□□□□ -1.13
HMGB1P17-201ENST00000403495 TYW1BQ6NUM6 668 aa8□□□□□ -1.13
HMGB1P17-201ENST00000403495 POTEGQ6S5H5 508 aa8□□□□□ -1.13
HMGB1P17-201ENST00000403495 ZNF454Q8N9F8 522 aa8□□□□□ -1.13
HMGB1P17-201ENST00000403495 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P17-201ENST00000403495 C14orf37Q86TY3 774 aa7.99□□□□□ -1.13
HMGB1P17-201ENST00000403495 NLRP7Q8WX94 980 aa7.99□□□□□ -1.13
HMGB1P17-201ENST00000403495 FOSBP53539 338 aa7.98□□□□□ -1.13
HMGB1P17-201ENST00000403495 AMHR2Q16671 573 aa7.98□□□□□ -1.13
HMGB1P17-201ENST00000403495 JPH4Q96JJ6 628 aa7.98□□□□□ -1.13
HMGB1P17-201ENST00000403495 REPIN1Q9BWE0 567 aaKnown RBP7.98□□□□□ -1.13
HMGB1P17-201ENST00000403495 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
HMGB1P17-201ENST00000403495 PLEKHG3A1L390 1219 aa7.96□□□□□ -1.14
HMGB1P17-201ENST00000403495 DOK7Q18PE1 504 aa7.96□□□□□ -1.14
HMGB1P17-201ENST00000403495 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
HMGB1P17-201ENST00000403495 C6orf132Q5T0Z8 1188 aa7.95□□□□□ -1.14
HMGB1P17-201ENST00000403495 GPR153Q6NV75 609 aa7.95□□□□□ -1.14
HMGB1P17-201ENST00000403495 PADI6Q6TGC4 694 aa7.95□□□□□ -1.14
HMGB1P17-201ENST00000403495 ZDHHC16Q969W1 377 aa7.95□□□□□ -1.14
HMGB1P17-201ENST00000403495 MS4A1P11836 297 aa7.94□□□□□ -1.14
HMGB1P17-201ENST00000403495 MDM2Q00987 491 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P17-201ENST00000403495 GIGYF2Q6Y7W6 1299 aaKnown RBP7.94□□□□□ -1.14
HMGB1P17-201ENST00000403495 SCUBE2Q9NQ36 999 aa7.94□□□□□ -1.14
HMGB1P17-201ENST00000403495 LHX6Q9UPM6 363 aa7.94□□□□□ -1.14
HMGB1P17-201ENST00000403495 ZNF710Q8N1W2 664 aa7.93□□□□□ -1.14
HMGB1P17-201ENST00000403495 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
HMGB1P17-201ENST00000403495 RIMBP2O15034 1052 aa7.91□□□□□ -1.14
HMGB1P17-201ENST00000403495 COL9A1P20849 921 aa7.9□□□□□ -1.14
HMGB1P17-201ENST00000403495 DDRGK1Q96HY6 314 aa7.89□□□□□ -1.15
HMGB1P17-201ENST00000403495 FAM198AQ9UFP1 575 aa7.89□□□□□ -1.15
HMGB1P17-201ENST00000403495 METTL3Q86U44 580 aaKnown RBP7.88□□□□□ -1.15
HMGB1P17-201ENST00000403495 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
HMGB1P17-201ENST00000403495 ZSWIM6Q9HCJ5 1215 aa7.88□□□□□ -1.15
HMGB1P17-201ENST00000403495 ADGRG1Q9Y653 693 aa7.88□□□□□ -1.15
HMGB1P17-201ENST00000403495 MAMSTRQ6ZN01 415 aa7.87□□□□□ -1.15
HMGB1P17-201ENST00000403495 C3orf80F5H4A9 247 aa7.86□□□□□ -1.15
HMGB1P17-201ENST00000403495 PRSS12P56730 875 aa7.86□□□□□ -1.15
HMGB1P17-201ENST00000403495 PXYLP1Q8TE99 480 aa7.86□□□□□ -1.15
HMGB1P17-201ENST00000403495 OTUD5Q96G74 571 aa7.86□□□□□ -1.15
HMGB1P17-201ENST00000403495 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
HMGB1P17-201ENST00000403495 GPCPD1Q9NPB8 672 aa7.86□□□□□ -1.15
HMGB1P17-201ENST00000403495 SSTR3P32745 418 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P17-201ENST00000403495 CLCN1P35523 988 aa7.85□□□□□ -1.15
HMGB1P17-201ENST00000403495 PPP4R3BQ5MIZ7 849 aa7.85□□□□□ -1.15
HMGB1P17-201ENST00000403495 TTC13Q8NBP0 860 aa7.85□□□□□ -1.15
HMGB1P17-201ENST00000403495 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
HMGB1P17-201ENST00000403495 CERKQ8TCT0 537 aa7.84□□□□□ -1.15
HMGB1P17-201ENST00000403495 TSKSQ9UJT2 592 aa7.84□□□□□ -1.15
HMGB1P17-201ENST00000403495 DAXXQ9UER7 740 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P17-201ENST00000403495 OATP04181 439 aa7.82□□□□□ -1.16
HMGB1P17-201ENST00000403495 HOXB1P14653 301 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P17-201ENST00000403495 ERICH6Q7L0X2 663 aa7.82□□□□□ -1.16
HMGB1P17-201ENST00000403495 BEGAINQ9BUH8 593 aa7.82□□□□□ -1.16
HMGB1P17-201ENST00000403495 BCL2L12Q9HB09 334 aa7.82□□□□□ -1.16
HMGB1P17-201ENST00000403495 FAM217BQ9NTX9 383 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P17-201ENST00000403495 PROX2Q3B8N5 592 aa7.81□□□□□ -1.16
HMGB1P17-201ENST00000403495 KCNK17Q96T54 332 aa7.81□□□□□ -1.16
HMGB1P17-201ENST00000403495 SMAPO00193 183 aa7.8□□□□□ -1.16
HMGB1P17-201ENST00000403495 PTPREP23469 700 aa7.8□□□□□ -1.16
HMGB1P17-201ENST00000403495 NUDT18Q6ZVK8 323 aa7.8□□□□□ -1.16
HMGB1P17-201ENST00000403495 RBM27Q9P2N5 1060 aaKnown RBP7.8□□□□□ -1.16
HMGB1P17-201ENST00000403495 RCCD1A6NED2 376 aa7.79□□□□□ -1.16
HMGB1P17-201ENST00000403495 PPP1R3GB7ZBB8 358 aa7.79□□□□□ -1.16
HMGB1P17-201ENST00000403495 RBM46Q8TBY0 533 aaKnown RBP7.79□□□□□ -1.16
HMGB1P17-201ENST00000403495 POLR3EQ9NVU0 708 aa7.79□□□□□ -1.16
HMGB1P17-201ENST00000403495 SNPHO15079 494 aa7.78□□□□□ -1.16
HMGB1P17-201ENST00000403495 PSEN2P49810 448 aa7.78□□□□□ -1.16
HMGB1P17-201ENST00000403495 PROCA1Q8NCQ7 364 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P17-201ENST00000403495 EYA1Q99502 592 aa7.78□□□□□ -1.16
HMGB1P17-201ENST00000403495 PNMA3Q9UL41 463 aa7.78□□□□□ -1.16
HMGB1P17-201ENST00000403495 ATP1B4Q9UN42 357 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P17-201ENST00000403495 SH3D19Q5HYK7 790 aa7.77□□□□□ -1.17
HMGB1P17-201ENST00000403495 PCMTD1Q96MG8 357 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P17-201ENST00000403495 PSDA5PKW4 1024 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P17-201ENST00000403495 TRIM6-TRIM34B2RNG4 842 aa7.76□□□□□ -1.17
HMGB1P17-201ENST00000403495 TATDN2Q93075 761 aa7.76□□□□□ -1.17
HMGB1P17-201ENST00000403495 AXIN2Q9Y2T1 843 aa7.75□□□□□ -1.17
HMGB1P17-201ENST00000403495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 DDX11L8A8MPP1 907 aa7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 VARS2Q5ST30 1063 aaKnown RBP7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 MYSM1Q5VVJ2 828 aa7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 POTEEQ6S8J3 1075 aa7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 TBC1D2Q9BYX2 928 aa7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 GOPCQ9HD26 462 aa7.74□□□□□ -1.17
HMGB1P17-201ENST00000403495 NBPF26B4DH59 902 aa7.73□□□□□ -1.17
HMGB1P17-201ENST00000403495 SKIV2LQ15477 1246 aaKnown RBP7.73□□□□□ -1.17
HMGB1P17-201ENST00000403495 FBXO31Q5XUX0 539 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P17-201ENST00000403495 MARVELD3Q96A59 401 aa7.73□□□□□ -1.17
HMGB1P17-201ENST00000403495 KIAA1468Q9P260 1216 aa7.73□□□□□ -1.17
HMGB1P17-201ENST00000403495 ERBB3P21860 1342 aa7.73□□□□□ -1.17
HMGB1P17-201ENST00000403495 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
HMGB1P17-201ENST00000403495 PACS2Q86VP3 889 aa7.72□□□□□ -1.17
HMGB1P17-201ENST00000403495 ZMYND15Q9H091 742 aa7.72□□□□□ -1.17
HMGB1P17-201ENST00000403495 ST18O60284 1047 aa7.71□□□□□ -1.18
HMGB1P17-201ENST00000403495 ONECUT3O60422 494 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P17-201ENST00000403495 DNAJB2P25686 324 aa7.71□□□□□ -1.18
HMGB1P17-201ENST00000403495 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.18
HMGB1P17-201ENST00000403495 RSPH6AQ9H0K4 717 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms