RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 CRBNQ96SW2 442 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 SETQ01105 290 aaPredicted RBP12.41□□□□□ -0.42
PTPRM-203ENST00000400060 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
PTPRM-203ENST00000400060 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
PTPRM-203ENST00000400060 GPS2Q13227 327 aa12.41□□□□□ -0.42
PTPRM-203ENST00000400060 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
PTPRM-203ENST00000400060 BRD4O60885 1362 aaPredicted RBP12.4□□□□□ -0.42
PTPRM-203ENST00000400060 SASS6Q6UVJ0 657 aa12.4□□□□□ -0.42
PTPRM-203ENST00000400060 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
PTPRM-203ENST00000400060 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
PTPRM-203ENST00000400060 RAPGEF2Q9Y4G8 1499 aa12.39□□□□□ -0.43
PTPRM-203ENST00000400060 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
PTPRM-203ENST00000400060 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
PTPRM-203ENST00000400060 MCCP23508 829 aa12.38□□□□□ -0.43
PTPRM-203ENST00000400060 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPRM-203ENST00000400060 MCM4P33991 863 aa12.37□□□□□ -0.43
PTPRM-203ENST00000400060 NUCB2P80303 420 aa12.37□□□□□ -0.43
PTPRM-203ENST00000400060 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
PTPRM-203ENST00000400060 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
PTPRM-203ENST00000400060 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
PTPRM-203ENST00000400060 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
PTPRM-203ENST00000400060 UACAQ9BZF9 1416 aa12.37□□□□□ -0.43
PTPRM-203ENST00000400060 CCDC18Q5T9S5 1454 aa12.37□□□□□ -0.43
PTPRM-203ENST00000400060 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
PTPRM-203ENST00000400060 ANKRD30AQ9BXX3 1397 aa12.36□□□□□ -0.43
PTPRM-203ENST00000400060 KIF20AO95235 890 aa12.36□□□□□ -0.43
PTPRM-203ENST00000400060 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
PTPRM-203ENST00000400060 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
PTPRM-203ENST00000400060 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
PTPRM-203ENST00000400060 MFAP1P55081 439 aaKnown RBP12.35□□□□□ -0.43
PTPRM-203ENST00000400060 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
PTPRM-203ENST00000400060 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
PTPRM-203ENST00000400060 CALCOCO1Q9P1Z2 691 aa12.34□□□□□ -0.43
PTPRM-203ENST00000400060 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
PTPRM-203ENST00000400060 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
PTPRM-203ENST00000400060 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
PTPRM-203ENST00000400060 FGD1P98174 961 aa12.32□□□□□ -0.44
PTPRM-203ENST00000400060 POGKQ9P215 609 aa12.32□□□□□ -0.44
PTPRM-203ENST00000400060 ST18O60284 1047 aa12.31□□□□□ -0.44
PTPRM-203ENST00000400060 TMF1P82094 1093 aa12.31□□□□□ -0.44
PTPRM-203ENST00000400060 CCDC94Q9BW85 323 aaPredicted RBP12.31□□□□□ -0.44
PTPRM-203ENST00000400060 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
PTPRM-203ENST00000400060 CAVIN1Q6NZI2 390 aaKnown RBP12.31□□□□□ -0.44
PTPRM-203ENST00000400060 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
PTPRM-203ENST00000400060 MBD3O95983 291 aa12.3□□□□□ -0.44
PTPRM-203ENST00000400060 ARGLU1Q9NWB6 273 aaPredicted RBP12.3□□□□□ -0.44
PTPRM-203ENST00000400060 IPO8O15397 1037 aaKnown RBP12.3□□□□□ -0.44
PTPRM-203ENST00000400060 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
PTPRM-203ENST00000400060 OFD1O75665 1012 aa12.29□□□□□ -0.44
PTPRM-203ENST00000400060 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
PTPRM-203ENST00000400060 UTP14CQ5TAP6 766 aaKnown RBP12.29□□□□□ -0.44
PTPRM-203ENST00000400060 C22orf23Q9BZE7 217 aa12.29□□□□□ -0.44
PTPRM-203ENST00000400060 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
PTPRM-203ENST00000400060 NBPF1Q3BBV0 1214 aa12.28□□□□□ -0.44
PTPRM-203ENST00000400060 E9PSI1 815 aa12.28□□□□□ -0.44
PTPRM-203ENST00000400060 RGL3Q3MIN7 710 aa12.28□□□□□ -0.44
PTPRM-203ENST00000400060 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
PTPRM-203ENST00000400060 GOLGA6L4A6NEF3 574 aa12.27□□□□□ -0.44
PTPRM-203ENST00000400060 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
PTPRM-203ENST00000400060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRM-203ENST00000400060 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
PTPRM-203ENST00000400060 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
PTPRM-203ENST00000400060 ESF1Q9H501 851 aaKnown RBP12.26□□□□□ -0.45
PTPRM-203ENST00000400060 NAP1L2Q9ULW6 460 aaPredicted RBP12.26□□□□□ -0.45
PTPRM-203ENST00000400060 RRAGDQ9NQL2 400 aaPredicted RBP12.25□□□□□ -0.45
PTPRM-203ENST00000400060 ATP6V1DQ9Y5K8 247 aa12.25□□□□□ -0.45
PTPRM-203ENST00000400060 XRCC6P12956 609 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPRM-203ENST00000400060 CUX1P39880 1505 aa12.24□□□□□ -0.45
PTPRM-203ENST00000400060 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
PTPRM-203ENST00000400060 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
PTPRM-203ENST00000400060 TPM4P67936 248 aa12.24□□□□□ -0.45
PTPRM-203ENST00000400060 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
PTPRM-203ENST00000400060 TIGD1Q96MW7 591 aa12.24□□□□□ -0.45
PTPRM-203ENST00000400060 ZHX1Q9UKY1 873 aaPredicted RBP12.24□□□□□ -0.45
PTPRM-203ENST00000400060 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
PTPRM-203ENST00000400060 CTR9Q6PD62 1173 aa12.23□□□□□ -0.45
PTPRM-203ENST00000400060 IPO4Q8TEX9 1081 aaKnown RBP12.23□□□□□ -0.45
PTPRM-203ENST00000400060 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
PTPRM-203ENST00000400060 FAM184AQ8NB25 1140 aa12.23□□□□□ -0.45
PTPRM-203ENST00000400060 DHX8Q14562 1220 aaKnown RBP12.22□□□□□ -0.45
PTPRM-203ENST00000400060 CGNQ9P2M7 1197 aaKnown RBP12.22□□□□□ -0.45
PTPRM-203ENST00000400060 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
PTPRM-203ENST00000400060 TSPY26PQ9H489 355 aa12.22□□□□□ -0.45
PTPRM-203ENST00000400060 USP47Q96K76 1375 aa12.22□□□□□ -0.45
PTPRM-203ENST00000400060 USP8P40818 1118 aa12.21□□□□□ -0.45
PTPRM-203ENST00000400060 PLIN1O60240 522 aa12.21□□□□□ -0.45
PTPRM-203ENST00000400060 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.46
PTPRM-203ENST00000400060 CLUAP1Q96AJ1 413 aa12.21□□□□□ -0.46
PTPRM-203ENST00000400060 AK7Q96M32 723 aa12.21□□□□□ -0.46
PTPRM-203ENST00000400060 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.46
PTPRM-203ENST00000400060 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
PTPRM-203ENST00000400060 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
PTPRM-203ENST00000400060 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
PTPRM-203ENST00000400060 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
PTPRM-203ENST00000400060 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
PTPRM-203ENST00000400060 ACBD3Q9H3P7 528 aa12.19□□□□□ -0.46
PTPRM-203ENST00000400060 LRRC9Q6ZRR7 1453 aa12.19□□□□□ -0.46
PTPRM-203ENST00000400060 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms