RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
SMCO1-201ENST00000397537 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
SMCO1-201ENST00000397537 PRR29P0C7W0 189 aa9.79□□□□□ -0.84
SMCO1-201ENST00000397537 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
SMCO1-201ENST00000397537 MRRFQ96E11 262 aaKnown RBP9.79□□□□□ -0.84
SMCO1-201ENST00000397537 KDM4AO75164 1064 aa9.79□□□□□ -0.84
SMCO1-201ENST00000397537 CC2D2BQ6DHV5 1058 aa9.79□□□□□ -0.84
SMCO1-201ENST00000397537 SPDYE5A6NIY4 337 aa9.78□□□□□ -0.84
SMCO1-201ENST00000397537 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
SMCO1-201ENST00000397537 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
SMCO1-201ENST00000397537 DRC1Q96MC2 740 aa9.78□□□□□ -0.84
SMCO1-201ENST00000397537 PSMD1Q99460 953 aa9.78□□□□□ -0.84
SMCO1-201ENST00000397537 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
SMCO1-201ENST00000397537 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
SMCO1-201ENST00000397537 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
SMCO1-201ENST00000397537 DDX27Q96GQ7 796 aaKnown RBP9.77□□□□□ -0.85
SMCO1-201ENST00000397537 BCCIPQ9P287 314 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMCO1-201ENST00000397537 TBC1D12O60347 775 aa9.76□□□□□ -0.85
SMCO1-201ENST00000397537 PDE4AP27815 886 aa9.76□□□□□ -0.85
SMCO1-201ENST00000397537 SKIV2LQ15477 1246 aaKnown RBP9.76□□□□□ -0.85
SMCO1-201ENST00000397537 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.76□□□□□ -0.85
SMCO1-201ENST00000397537 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
SMCO1-201ENST00000397537 TMED8Q6PL24 325 aaPredicted RBP9.75□□□□□ -0.85
SMCO1-201ENST00000397537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.75□□□□□ -0.85
SMCO1-201ENST00000397537 TICAM2Q86XR7 235 aa9.75□□□□□ -0.85
SMCO1-201ENST00000397537 FBXO22Q8NEZ5 403 aa9.75□□□□□ -0.85
SMCO1-201ENST00000397537 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
SMCO1-201ENST00000397537 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
SMCO1-201ENST00000397537 GLMNQ92990 594 aa9.74□□□□□ -0.85
SMCO1-201ENST00000397537 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
SMCO1-201ENST00000397537 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
SMCO1-201ENST00000397537 SREK1Q8WXA9 508 aaKnown RBP9.73□□□□□ -0.85
SMCO1-201ENST00000397537 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
SMCO1-201ENST00000397537 CREBZFQ9NS37 354 aa9.72□□□□□ -0.85
SMCO1-201ENST00000397537 POM121CA8CG34 1229 aa9.72□□□□□ -0.85
SMCO1-201ENST00000397537 BCL11AQ9H165 835 aa9.72□□□□□ -0.85
SMCO1-201ENST00000397537 NCLP19338 710 aaKnown RBP9.71□□□□□ -0.85
SMCO1-201ENST00000397537 MNX1P50219 401 aaPredicted RBP9.71□□□□□ -0.85
SMCO1-201ENST00000397537 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.85
SMCO1-201ENST00000397537 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
SMCO1-201ENST00000397537 TCF3P15923 654 aa9.7□□□□□ -0.86
SMCO1-201ENST00000397537 FECHP22830 423 aa9.7□□□□□ -0.86
SMCO1-201ENST00000397537 SIRT1Q96EB6 747 aa9.69□□□□□ -0.86
SMCO1-201ENST00000397537 C8orf37Q96NL8 207 aa9.69□□□□□ -0.86
SMCO1-201ENST00000397537 CLSTN1O94985 981 aa9.68□□□□□ -0.86
SMCO1-201ENST00000397537 RFX1P22670 979 aa9.68□□□□□ -0.86
SMCO1-201ENST00000397537 PDAP1Q13442 181 aaKnown RBP9.68□□□□□ -0.86
SMCO1-201ENST00000397537 GDPD2Q9HCC8 539 aa9.68□□□□□ -0.86
SMCO1-201ENST00000397537 SCRIBQ14160 1630 aa9.67□□□□□ -0.86
SMCO1-201ENST00000397537 ANKRD62A6NC57 917 aa9.67□□□□□ -0.86
SMCO1-201ENST00000397537 GNPATO15228 680 aa9.66□□□□□ -0.86
SMCO1-201ENST00000397537 VRTNQ9H8Y1 702 aa9.66□□□□□ -0.86
SMCO1-201ENST00000397537 ZNF16P17020 682 aaPredicted RBP9.66□□□□□ -0.86
SMCO1-201ENST00000397537 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMCO1-201ENST00000397537 ZNF526Q8TF50 670 aaPredicted RBP9.66□□□□□ -0.86
SMCO1-201ENST00000397537 PRDM16Q9HAZ2 1276 aa9.66□□□□□ -0.86
SMCO1-201ENST00000397537 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
SMCO1-201ENST00000397537 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
SMCO1-201ENST00000397537 DNAJC14Q6Y2X3 702 aaPredicted RBP9.65□□□□□ -0.86
SMCO1-201ENST00000397537 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMCO1-201ENST00000397537 HIRIP3Q9BW71 556 aaPredicted RBP9.65□□□□□ -0.86
SMCO1-201ENST00000397537 GNEQ9Y223 722 aaKnown RBP9.65□□□□□ -0.86
SMCO1-201ENST00000397537 IRX6P78412 446 aaPredicted RBP9.64□□□□□ -0.87
SMCO1-201ENST00000397537 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
SMCO1-201ENST00000397537 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
SMCO1-201ENST00000397537 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
SMCO1-201ENST00000397537 THOC2Q8NI27 1593 aaKnown RBP9.64□□□□□ -0.87
SMCO1-201ENST00000397537 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 DPYSL4O14531 572 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 NLRP6P59044 892 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 TMEM88BA6NKF7 163 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 PDIA6Q15084 440 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 BANK1Q8NDB2 785 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 POLR3EQ9NVU0 708 aa9.63□□□□□ -0.87
SMCO1-201ENST00000397537 EVX2Q03828 476 aa9.62□□□□□ -0.87
SMCO1-201ENST00000397537 UBXN4Q92575 508 aa9.62□□□□□ -0.87
SMCO1-201ENST00000397537 NOM1Q5C9Z4 860 aaKnown RBP9.61□□□□□ -0.87
SMCO1-201ENST00000397537 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
SMCO1-201ENST00000397537 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
SMCO1-201ENST00000397537 ATP1B4Q9UN42 357 aaPredicted RBP9.61□□□□□ -0.87
SMCO1-201ENST00000397537 MARCH6O60337 910 aa9.61□□□□□ -0.87
SMCO1-201ENST00000397537 PPP1R1BQ9UD71 204 aaPredicted RBP9.61□□□□□ -0.87
SMCO1-201ENST00000397537 FBXO31Q5XUX0 539 aaPredicted RBP9.6□□□□□ -0.87
SMCO1-201ENST00000397537 MTMR14Q8NCE2 650 aa9.6□□□□□ -0.87
SMCO1-201ENST00000397537 ZNF662Q6ZS27 426 aa9.59□□□□□ -0.87
SMCO1-201ENST00000397537 NESP48681 1621 aa9.59□□□□□ -0.87
SMCO1-201ENST00000397537 LOC102724159A0A0B4J2E5 919 aa9.59□□□□□ -0.88
SMCO1-201ENST00000397537 PWP2Q15269 919 aaKnown RBP9.59□□□□□ -0.88
SMCO1-201ENST00000397537 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.88
SMCO1-201ENST00000397537 ADAMTS19Q8TE59 1207 aa9.59□□□□□ -0.88
SMCO1-201ENST00000397537 PCDHB8Q9UN66 801 aa9.59□□□□□ -0.88
SMCO1-201ENST00000397537 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.88
SMCO1-201ENST00000397537 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
SMCO1-201ENST00000397537 RFC5P40937 340 aa9.58□□□□□ -0.88
SMCO1-201ENST00000397537 ABL2P42684 1182 aa9.58□□□□□ -0.88
SMCO1-201ENST00000397537 HIC1Q14526 733 aa9.58□□□□□ -0.88
SMCO1-201ENST00000397537 TMUB1Q9BVT8 246 aa9.58□□□□□ -0.88
SMCO1-201ENST00000397537 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
SMCO1-201ENST00000397537 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms