RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
GNE-202ENST00000396594 SYAP1Q96A49 352 aaPredicted RBP19.65■□□□□ 0.74
GNE-202ENST00000396594 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
GNE-202ENST00000396594 RGS3P49796 1198 aa19.64■□□□□ 0.73
GNE-202ENST00000396594 LRRFIP1Q32MZ4 808 aaKnown RBP19.64■□□□□ 0.73
GNE-202ENST00000396594 HFM1A2PYH4 1435 aa19.63■□□□□ 0.73
GNE-202ENST00000396594 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
GNE-202ENST00000396594 DHX57Q6P158 1386 aaKnown RBP19.63■□□□□ 0.73
GNE-202ENST00000396594 LRRC9Q6ZRR7 1453 aa19.63■□□□□ 0.73
GNE-202ENST00000396594 HECW1Q76N89 1606 aa19.63■□□□□ 0.73
GNE-202ENST00000396594 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
GNE-202ENST00000396594 CENPJQ9HC77 1338 aaPredicted RBP19.61■□□□□ 0.73
GNE-202ENST00000396594 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
GNE-202ENST00000396594 PAK3O75914 559 aaPredicted RBP19.61■□□□□ 0.73
GNE-202ENST00000396594 AMPHP49418 695 aa19.6■□□□□ 0.73
GNE-202ENST00000396594 COG3Q96JB2 828 aa19.6■□□□□ 0.73
GNE-202ENST00000396594 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
GNE-202ENST00000396594 E9PSI1 815 aa19.58■□□□□ 0.73
GNE-202ENST00000396594 PLEKHG5O94827 1062 aa19.58■□□□□ 0.72
GNE-202ENST00000396594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
GNE-202ENST00000396594 HMGB2P26583 209 aaKnown RBP19.56■□□□□ 0.72
GNE-202ENST00000396594 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
GNE-202ENST00000396594 TPM4P67936 248 aa19.55■□□□□ 0.72
GNE-202ENST00000396594 ITPRIPQ8IWB1 547 aa19.55■□□□□ 0.72
GNE-202ENST00000396594 USP47Q96K76 1375 aa19.55■□□□□ 0.72
GNE-202ENST00000396594 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
GNE-202ENST00000396594 SMC4Q9NTJ3 1288 aa19.55■□□□□ 0.72
GNE-202ENST00000396594 ANKRD50Q9ULJ7 1429 aa19.54■□□□□ 0.72
GNE-202ENST00000396594 NCOA2Q15596 1464 aa19.53■□□□□ 0.72
GNE-202ENST00000396594 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
GNE-202ENST00000396594 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
GNE-202ENST00000396594 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
GNE-202ENST00000396594 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
GNE-202ENST00000396594 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
GNE-202ENST00000396594 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
GNE-202ENST00000396594 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
GNE-202ENST00000396594 DNTTIP2Q5QJE6 756 aaKnown RBP19.52■□□□□ 0.72
GNE-202ENST00000396594 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
GNE-202ENST00000396594 TAF7LQ5H9L4 462 aa19.51■□□□□ 0.71
GNE-202ENST00000396594 C1orf141Q5JVX7 400 aa19.51■□□□□ 0.71
GNE-202ENST00000396594 CUL7Q14999 1698 aa19.5■□□□□ 0.71
GNE-202ENST00000396594 GORABQ5T7V8 394 aa19.5■□□□□ 0.71
GNE-202ENST00000396594 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
GNE-202ENST00000396594 USP35Q9P2H5 1018 aa19.49■□□□□ 0.71
GNE-202ENST00000396594 ZBED9Q6R2W3 1325 aa19.47■□□□□ 0.71
GNE-202ENST00000396594 FOXD1Q16676 465 aa19.47■□□□□ 0.71
GNE-202ENST00000396594 CENPQQ7L2Z9 268 aaPredicted RBP19.47■□□□□ 0.71
GNE-202ENST00000396594 NAP1L2Q9ULW6 460 aaPredicted RBP19.47■□□□□ 0.71
GNE-202ENST00000396594 KIAA2012Q0VF49 1180 aa19.46■□□□□ 0.71
GNE-202ENST00000396594 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
GNE-202ENST00000396594 POGZQ7Z3K3 1410 aa19.46■□□□□ 0.71
GNE-202ENST00000396594 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
GNE-202ENST00000396594 PHF14O94880 888 aa19.46■□□□□ 0.71
GNE-202ENST00000396594 TROQ12816 1431 aaPredicted RBP19.46■□□□□ 0.71
GNE-202ENST00000396594 PRXQ9BXM0 1461 aa19.45■□□□□ 0.7
GNE-202ENST00000396594 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
GNE-202ENST00000396594 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.78e-8■■■■■ 39.5
GNE-202ENST00000396594 ST18O60284 1047 aa19.44■□□□□ 0.7
GNE-202ENST00000396594 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
GNE-202ENST00000396594 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
GNE-202ENST00000396594 SOX12O15370 315 aa19.43■□□□□ 0.7
GNE-202ENST00000396594 ZKSCAN2Q63HK3 967 aa19.43■□□□□ 0.7
GNE-202ENST00000396594 HSP90B1P14625 803 aaKnown RBP19.42■□□□□ 0.7
GNE-202ENST00000396594 NEXNQ0ZGT2 675 aa19.42■□□□□ 0.7
GNE-202ENST00000396594 HSP90AB4PQ58FF6 505 aa19.42■□□□□ 0.7
GNE-202ENST00000396594 B4GALNT3Q6L9W6 998 aa19.42■□□□□ 0.7
GNE-202ENST00000396594 TRAK1Q9UPV9 953 aa19.42■□□□□ 0.7
GNE-202ENST00000396594 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
GNE-202ENST00000396594 KIAA0586Q9BVV6 1533 aa19.42■□□□□ 0.7
GNE-202ENST00000396594 ATP6V1DQ9Y5K8 247 aa19.42■□□□□ 0.7
GNE-202ENST00000396594 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
GNE-202ENST00000396594 PANK3Q9H999 370 aa19.41■□□□□ 0.7
GNE-202ENST00000396594 MSNP26038 577 aaKnown RBP19.41■□□□□ 0.7
GNE-202ENST00000396594 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
GNE-202ENST00000396594 DAPK1P53355 1430 aa19.41■□□□□ 0.7
GNE-202ENST00000396594 RUFY2Q8WXA3 655 aa19.41■□□□□ 0.7
GNE-202ENST00000396594 DIAPH1O60610 1272 aaKnown RBP19.4■□□□□ 0.7
GNE-202ENST00000396594 MAP3K1Q13233 1512 aa19.4■□□□□ 0.7
GNE-202ENST00000396594 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.7
GNE-202ENST00000396594 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.69
GNE-202ENST00000396594 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
GNE-202ENST00000396594 TEFQ10587 303 aa19.38■□□□□ 0.69
GNE-202ENST00000396594 PRKRIP1Q9H875 184 aaPredicted RBP19.38■□□□□ 0.69
GNE-202ENST00000396594 BRD4O60885 1362 aaPredicted RBP19.37■□□□□ 0.69
GNE-202ENST00000396594 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
GNE-202ENST00000396594 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
GNE-202ENST00000396594 GNAI1P63096 354 aa19.36■□□□□ 0.69
GNE-202ENST00000396594 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
GNE-202ENST00000396594 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
GNE-202ENST00000396594 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
GNE-202ENST00000396594 AMOTL1Q8IY63 956 aa19.35■□□□□ 0.69
GNE-202ENST00000396594 RUNDC1Q96C34 613 aa19.35■□□□□ 0.69
GNE-202ENST00000396594 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
GNE-202ENST00000396594 CCDC9Q9Y3X0 531 aaKnown RBP19.34■□□□□ 0.69
GNE-202ENST00000396594 G3V3G9 751 aa19.34■□□□□ 0.69
GNE-202ENST00000396594 DCAF8Q5TAQ9 597 aa19.34■□□□□ 0.69
GNE-202ENST00000396594 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
GNE-202ENST00000396594 DDX11L8A8MPP1 907 aa19.33■□□□□ 0.68
GNE-202ENST00000396594 SKOR2Q2VWA4 1001 aaPredicted RBP19.32■□□□□ 0.68
GNE-202ENST00000396594 KIAA1107Q9UPP5 1409 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms