RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 PHF8Q9UPP1 1060 aa6.58□□□□□ -1.36
TNFRSF17-202ENST00000396495 FKBP8Q14318 412 aa6.57□□□□□ -1.36
TNFRSF17-202ENST00000396495 PPARGC1BQ86YN6 1023 aaKnown RBP6.57□□□□□ -1.36
TNFRSF17-202ENST00000396495 DCAF1Q9Y4B6 1507 aa6.56□□□□□ -1.36
TNFRSF17-202ENST00000396495 C2orf72A6NCS6 295 aa6.56□□□□□ -1.36
TNFRSF17-202ENST00000396495 NLRP6P59044 892 aa6.56□□□□□ -1.36
TNFRSF17-202ENST00000396495 SPOCK2Q92563 424 aa6.55□□□□□ -1.36
TNFRSF17-202ENST00000396495 WNT2BQ93097 391 aa6.55□□□□□ -1.36
TNFRSF17-202ENST00000396495 KIF3CO14782 793 aa6.54□□□□□ -1.36
TNFRSF17-202ENST00000396495 UBTFP17480 764 aaKnown RBP6.54□□□□□ -1.36
TNFRSF17-202ENST00000396495 NAP1L5Q96NT1 182 aaPredicted RBP6.54□□□□□ -1.36
TNFRSF17-202ENST00000396495 ZMYND15Q9H091 742 aa6.54□□□□□ -1.36
TNFRSF17-202ENST00000396495 GFRA3O60609 400 aa6.53□□□□□ -1.36
TNFRSF17-202ENST00000396495 IGSF3O75054 1194 aa6.53□□□□□ -1.36
TNFRSF17-202ENST00000396495 ZNF787Q6DD87 383 aa6.53□□□□□ -1.36
TNFRSF17-202ENST00000396495 TMC2Q8TDI7 906 aa6.53□□□□□ -1.36
TNFRSF17-202ENST00000396495 KCNK17Q96T54 332 aa6.53□□□□□ -1.36
TNFRSF17-202ENST00000396495 VPS9D1Q9Y2B5 631 aa6.53□□□□□ -1.36
TNFRSF17-202ENST00000396495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.52□□□□□ -1.37
TNFRSF17-202ENST00000396495 ITGBL1O95965 494 aaPredicted RBP6.51□□□□□ -1.37
TNFRSF17-202ENST00000396495 TICAM2Q86XR7 235 aa6.51□□□□□ -1.37
TNFRSF17-202ENST00000396495 MRPL50Q8N5N7 158 aaKnown RBP6.51□□□□□ -1.37
TNFRSF17-202ENST00000396495 TEX2Q8IWB9 1127 aa6.49□□□□□ -1.37
TNFRSF17-202ENST00000396495 SLC4A5Q9BY07 1137 aa6.49□□□□□ -1.37
TNFRSF17-202ENST00000396495 TBC1D12O60347 775 aa6.48□□□□□ -1.37
TNFRSF17-202ENST00000396495 PAXIP1Q6ZW49 1069 aaPredicted RBP6.48□□□□□ -1.37
TNFRSF17-202ENST00000396495 NBPF3Q9H094 633 aa6.48□□□□□ -1.37
TNFRSF17-202ENST00000396495 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
TNFRSF17-202ENST00000396495 MYO15BQ96JP2 1530 aa6.47□□□□□ -1.37
TNFRSF17-202ENST00000396495 SUPT5HO00267 1087 aaKnown RBP6.47□□□□□ -1.37
TNFRSF17-202ENST00000396495 DEKP35659 375 aaKnown RBP6.47□□□□□ -1.37
TNFRSF17-202ENST00000396495 NRG2O14511 850 aaPredicted RBP6.46□□□□□ -1.38
TNFRSF17-202ENST00000396495 VGFO15240 615 aaPredicted RBP6.46□□□□□ -1.38
TNFRSF17-202ENST00000396495 CLSTN1O94985 981 aa6.46□□□□□ -1.38
TNFRSF17-202ENST00000396495 IPO4Q8TEX9 1081 aaKnown RBP6.46□□□□□ -1.38
TNFRSF17-202ENST00000396495 ZNF775Q96BV0 537 aaPredicted RBP6.46□□□□□ -1.38
TNFRSF17-202ENST00000396495 CCDC136Q96JN2 1154 aa6.46□□□□□ -1.38
TNFRSF17-202ENST00000396495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 LCE2BO14633 110 aa6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 RIOK3O14730 519 aaKnown RBP6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 KCNC4Q03721 635 aa6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 PTCD2Q8WV60 388 aaKnown RBP6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 ZFP91Q96JP5 570 aaPredicted RBP6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 TSHZ2Q9NRE2 1034 aa6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.45□□□□□ -1.38
TNFRSF17-202ENST00000396495 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF17-202ENST00000396495 KDM4FA0A1W2PPD8 638 aa6.44□□□□□ -1.38
TNFRSF17-202ENST00000396495 BHMG1C9JSJ3 638 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF17-202ENST00000396495 NYAP1Q6ZVC0 841 aa6.44□□□□□ -1.38
TNFRSF17-202ENST00000396495 FBXO22Q8NEZ5 403 aa6.42□□□□□ -1.38
TNFRSF17-202ENST00000396495 ANKK1Q8NFD2 765 aa6.42□□□□□ -1.38
TNFRSF17-202ENST00000396495 NAP1L2Q9ULW6 460 aaPredicted RBP6.42□□□□□ -1.38
TNFRSF17-202ENST00000396495 NCLP19338 710 aaKnown RBP6.41□□□□□ -1.38
TNFRSF17-202ENST00000396495 PTPREP23469 700 aa6.41□□□□□ -1.38
TNFRSF17-202ENST00000396495 GRIPAP1Q4V328 841 aa6.41□□□□□ -1.38
TNFRSF17-202ENST00000396495 CC2D2BQ6DHV5 1058 aa6.4□□□□□ -1.38
TNFRSF17-202ENST00000396495 KDM2AQ9Y2K7 1162 aa6.4□□□□□ -1.38
TNFRSF17-202ENST00000396495 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
TNFRSF17-202ENST00000396495 SETQ01105 290 aaPredicted RBP6.38□□□□□ -1.39
TNFRSF17-202ENST00000396495 ZNF454Q8N9F8 522 aa6.37□□□□□ -1.39
TNFRSF17-202ENST00000396495 ARID4BQ4LE39 1312 aaPredicted RBP6.36□□□□□ -1.39
TNFRSF17-202ENST00000396495 C11orf95C9JLR9 678 aaPredicted RBP6.36□□□□□ -1.39
TNFRSF17-202ENST00000396495 FTSJ3Q8IY81 847 aaKnown RBP6.36□□□□□ -1.39
TNFRSF17-202ENST00000396495 POLR3GLQ9BT43 218 aa6.36□□□□□ -1.39
TNFRSF17-202ENST00000396495 ZBED2Q9BTP6 218 aa6.36□□□□□ -1.39
TNFRSF17-202ENST00000396495 MCCP23508 829 aa6.35□□□□□ -1.39
TNFRSF17-202ENST00000396495 IFNLR1Q8IU57 520 aaPredicted RBP6.34□□□□□ -1.39
TNFRSF17-202ENST00000396495 SECISBP2LQ93073 1101 aaKnown RBP6.34□□□□□ -1.39
TNFRSF17-202ENST00000396495 PRKD2Q9BZL6 878 aa6.34□□□□□ -1.39
TNFRSF17-202ENST00000396495 ZNF592Q92610 1267 aa6.33□□□□□ -1.4
TNFRSF17-202ENST00000396495 PSMD1Q99460 953 aa6.33□□□□□ -1.4
TNFRSF17-202ENST00000396495 MFRPQ9BY79 579 aa6.33□□□□□ -1.4
TNFRSF17-202ENST00000396495 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
TNFRSF17-202ENST00000396495 NEFMP07197 916 aa6.32□□□□□ -1.4
TNFRSF17-202ENST00000396495 PLPP6Q8IY26 295 aa6.32□□□□□ -1.4
TNFRSF17-202ENST00000396495 STK24Q9Y6E0 443 aa6.32□□□□□ -1.4
TNFRSF17-202ENST00000396495 V9GY48 417 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF17-202ENST00000396495 FANCIQ9NVI1 1328 aa6.31□□□□□ -1.4
TNFRSF17-202ENST00000396495 SOWAHBA6NEL2 793 aa6.31□□□□□ -1.4
TNFRSF17-202ENST00000396495 GTF2E1P29083 439 aaPredicted RBP6.31□□□□□ -1.4
TNFRSF17-202ENST00000396495 FOXK1P85037 733 aa6.31□□□□□ -1.4
TNFRSF17-202ENST00000396495 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
TNFRSF17-202ENST00000396495 MMP14P50281 582 aa6.3□□□□□ -1.4
TNFRSF17-202ENST00000396495 BCAMP50895 628 aa6.3□□□□□ -1.4
TNFRSF17-202ENST00000396495 PDZRN3Q9UPQ7 1066 aa6.3□□□□□ -1.4
TNFRSF17-202ENST00000396495 MAFGO15525 162 aa6.29□□□□□ -1.4
TNFRSF17-202ENST00000396495 IRX6P78412 446 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF17-202ENST00000396495 LAPTM4BQ86VI4 370 aa6.29□□□□□ -1.4
TNFRSF17-202ENST00000396495 CNPY4Q8N129 248 aa6.29□□□□□ -1.4
TNFRSF17-202ENST00000396495 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
TNFRSF17-202ENST00000396495 RABGEF1Q9UJ41 708 aa6.29□□□□□ -1.4
TNFRSF17-202ENST00000396495 CENPJQ9HC77 1338 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF17-202ENST00000396495 NACADO15069 1562 aa6.28□□□□□ -1.4
TNFRSF17-202ENST00000396495 RRP9O43818 475 aaKnown RBP6.28□□□□□ -1.4
TNFRSF17-202ENST00000396495 PTMAP06454 111 aaKnown RBP6.28□□□□□ -1.4
TNFRSF17-202ENST00000396495 RNF25Q96BH1 459 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF17-202ENST00000396495 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF17-202ENST00000396495 PTMSP20962 102 aa6.27□□□□□ -1.41
TNFRSF17-202ENST00000396495 CALD1Q05682 793 aaKnown RBP6.27□□□□□ -1.41
TNFRSF17-202ENST00000396495 TMED8Q6PL24 325 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms