RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PCDHGA10Q9Y5H3 936 aa9.57□□□□□ -0.88
GABPB1-204ENST00000396464 PHF14O94880 888 aa9.56□□□□□ -0.88
GABPB1-204ENST00000396464 WNT2BQ93097 391 aa9.56□□□□□ -0.88
GABPB1-204ENST00000396464 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
GABPB1-204ENST00000396464 DPYSL4O14531 572 aa9.56□□□□□ -0.88
GABPB1-204ENST00000396464 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
GABPB1-204ENST00000396464 BHMG1C9JSJ3 638 aaPredicted RBP9.54□□□□□ -0.88
GABPB1-204ENST00000396464 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
GABPB1-204ENST00000396464 EPAS1Q99814 870 aa9.53□□□□□ -0.88
GABPB1-204ENST00000396464 TPRNQ4KMQ1 711 aa9.52□□□□□ -0.89
GABPB1-204ENST00000396464 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
GABPB1-204ENST00000396464 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
GABPB1-204ENST00000396464 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
GABPB1-204ENST00000396464 ARXQ96QS3 562 aa9.51□□□□□ -0.89
GABPB1-204ENST00000396464 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
GABPB1-204ENST00000396464 RABGEF1Q9UJ41 708 aa9.51□□□□□ -0.89
GABPB1-204ENST00000396464 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
GABPB1-204ENST00000396464 PAXIP1Q6ZW49 1069 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-204ENST00000396464 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
GABPB1-204ENST00000396464 DDX12PQ92771 950 aa9.49□□□□□ -0.89
GABPB1-204ENST00000396464 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
GABPB1-204ENST00000396464 COL9A1P20849 921 aa9.48□□□□□ -0.89
GABPB1-204ENST00000396464 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
GABPB1-204ENST00000396464 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.9
GABPB1-204ENST00000396464 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-204ENST00000396464 NBR1Q14596 966 aa9.45□□□□□ -0.9
GABPB1-204ENST00000396464 LAPTM4BQ86VI4 370 aa9.45□□□□□ -0.9
GABPB1-204ENST00000396464 MAP3K7O43318 606 aa9.44□□□□□ -0.9
GABPB1-204ENST00000396464 E2F4Q16254 413 aa9.44□□□□□ -0.9
GABPB1-204ENST00000396464 ONECUT3O60422 494 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-204ENST00000396464 PDIA6Q15084 440 aa9.42□□□□□ -0.9
GABPB1-204ENST00000396464 TRIM6-TRIM34B2RNG4 842 aa9.4□□□□□ -0.9
GABPB1-204ENST00000396464 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-204ENST00000396464 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
GABPB1-204ENST00000396464 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-204ENST00000396464 BCAMP50895 628 aa9.39□□□□□ -0.91
GABPB1-204ENST00000396464 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-204ENST00000396464 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
GABPB1-204ENST00000396464 SOWAHBA6NEL2 793 aa9.38□□□□□ -0.91
GABPB1-204ENST00000396464 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
GABPB1-204ENST00000396464 FAM98CQ17RN3 349 aaKnown RBP9.38□□□□□ -0.91
GABPB1-204ENST00000396464 VSIG10Q8N0Z9 540 aa9.38□□□□□ -0.91
GABPB1-204ENST00000396464 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
GABPB1-204ENST00000396464 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
GABPB1-204ENST00000396464 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
GABPB1-204ENST00000396464 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
GABPB1-204ENST00000396464 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-204ENST00000396464 CERKQ8TCT0 537 aa9.34□□□□□ -0.91
GABPB1-204ENST00000396464 A0A0G2JS52 829 aa9.32□□□□□ -0.92
GABPB1-204ENST00000396464 RGS20O76081 388 aa9.32□□□□□ -0.92
GABPB1-204ENST00000396464 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
GABPB1-204ENST00000396464 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
GABPB1-204ENST00000396464 TSR3Q9UJK0 312 aaKnown RBP9.31□□□□□ -0.92
GABPB1-204ENST00000396464 HPS5Q9UPZ3 1129 aa9.31□□□□□ -0.92
GABPB1-204ENST00000396464 ARIH1Q9Y4X5 557 aaPredicted RBP9.31□□□□□ -0.92
GABPB1-204ENST00000396464 PRSS12P56730 875 aa9.31□□□□□ -0.92
GABPB1-204ENST00000396464 TSKSQ9UJT2 592 aa9.31□□□□□ -0.92
GABPB1-204ENST00000396464 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
GABPB1-204ENST00000396464 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
GABPB1-204ENST00000396464 ITGBL1O95965 494 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-204ENST00000396464 PPP4CP60510 307 aa9.28□□□□□ -0.92
GABPB1-204ENST00000396464 KCNC4Q03721 635 aa9.28□□□□□ -0.92
GABPB1-204ENST00000396464 SMAPO00193 183 aa9.26□□□□□ -0.93
GABPB1-204ENST00000396464 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
GABPB1-204ENST00000396464 HOMEZQ8IX15 550 aa9.25□□□□□ -0.93
GABPB1-204ENST00000396464 RNF40O75150 1001 aa9.24□□□□□ -0.93
GABPB1-204ENST00000396464 OSBPP22059 807 aa9.24□□□□□ -0.93
GABPB1-204ENST00000396464 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
GABPB1-204ENST00000396464 TATDN2Q93075 761 aa9.24□□□□□ -0.93
GABPB1-204ENST00000396464 IRX2Q9BZI1 471 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-204ENST00000396464 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
GABPB1-204ENST00000396464 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
GABPB1-204ENST00000396464 CDHR5Q9HBB8 845 aa9.22□□□□□ -0.93
GABPB1-204ENST00000396464 KDM2AQ9Y2K7 1162 aa9.22□□□□□ -0.93
GABPB1-204ENST00000396464 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
GABPB1-204ENST00000396464 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.94
GABPB1-204ENST00000396464 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
GABPB1-204ENST00000396464 RBM27Q9P2N5 1060 aaKnown RBP9.21□□□□□ -0.94
GABPB1-204ENST00000396464 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
GABPB1-204ENST00000396464 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
GABPB1-204ENST00000396464 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
GABPB1-204ENST00000396464 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
GABPB1-204ENST00000396464 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
GABPB1-204ENST00000396464 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
GABPB1-204ENST00000396464 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
GABPB1-204ENST00000396464 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
GABPB1-204ENST00000396464 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
GABPB1-204ENST00000396464 P3H3Q8IVL6 736 aa9.13□□□□□ -0.95
GABPB1-204ENST00000396464 MTRQ99707 1265 aa9.13□□□□□ -0.95
GABPB1-204ENST00000396464 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-204ENST00000396464 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
GABPB1-204ENST00000396464 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
GABPB1-204ENST00000396464 NPDC1Q9NQX5 325 aaPredicted RBP9.11□□□□□ -0.95
GABPB1-204ENST00000396464 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
GABPB1-204ENST00000396464 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
GABPB1-204ENST00000396464 APLP1P51693 650 aa9.08□□□□□ -0.96
GABPB1-204ENST00000396464 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
GABPB1-204ENST00000396464 Q6ZNB5 142 aa9.07□□□□□ -0.96
GABPB1-204ENST00000396464 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
GABPB1-204ENST00000396464 GGCXP38435 758 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms