RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 EFCAB5A4FU69 1503 aa10□□□□□ -0.81
SOX6-202ENST00000396356 ZBED9Q6R2W3 1325 aa10□□□□□ -0.81
SOX6-202ENST00000396356 SUPT16HQ9Y5B9 1047 aaKnown RBP9.99□□□□□ -0.81
SOX6-202ENST00000396356 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
SOX6-202ENST00000396356 PIP4K2AP48426 406 aaPredicted RBP9.99□□□□□ -0.81
SOX6-202ENST00000396356 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.99□□□□□ -0.81
SOX6-202ENST00000396356 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
SOX6-202ENST00000396356 CWC15Q9P013 229 aaKnown RBP9.99□□□□□ -0.81
SOX6-202ENST00000396356 HMGB1P09429 215 aaKnown RBP9.98□□□□□ -0.81
SOX6-202ENST00000396356 LETM1O95202 739 aaPredicted RBP9.98□□□□□ -0.81
SOX6-202ENST00000396356 HSP90AB4PQ58FF6 505 aa9.98□□□□□ -0.81
SOX6-202ENST00000396356 NAT10Q9H0A0 1025 aaKnown RBP9.98□□□□□ -0.81
SOX6-202ENST00000396356 AMOTL1Q8IY63 956 aa9.98□□□□□ -0.81
SOX6-202ENST00000396356 ERCC4Q92889 916 aaPredicted RBP9.98□□□□□ -0.81
SOX6-202ENST00000396356 PLEKHH2Q8IVE3 1493 aa9.97□□□□□ -0.81
SOX6-202ENST00000396356 RNF20Q5VTR2 975 aa9.97□□□□□ -0.81
SOX6-202ENST00000396356 MYBBP1AQ9BQG0 1328 aaKnown RBP9.97□□□□□ -0.81
SOX6-202ENST00000396356 CENPJQ9HC77 1338 aaPredicted RBP9.97□□□□□ -0.81
SOX6-202ENST00000396356 FRAT1Q92837 279 aaPredicted RBP9.96□□□□□ -0.81
SOX6-202ENST00000396356 E9PSI1 815 aa9.96□□□□□ -0.81
SOX6-202ENST00000396356 RGS3P49796 1198 aa9.96□□□□□ -0.81
SOX6-202ENST00000396356 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.81
SOX6-202ENST00000396356 MCM2P49736 904 aa9.96□□□□□ -0.82
SOX6-202ENST00000396356 GOLGA6L19H0YKK7 550 aa9.95□□□□□ -0.82
SOX6-202ENST00000396356 CT47B1P0C2W7 299 aaPredicted RBP9.95□□□□□ -0.82
SOX6-202ENST00000396356 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
SOX6-202ENST00000396356 ARID3CA6NKF2 412 aa9.95□□□□□ -0.82
SOX6-202ENST00000396356 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
SOX6-202ENST00000396356 TAF3Q5VWG9 929 aa9.95□□□□□ -0.82
SOX6-202ENST00000396356 AK7Q96M32 723 aa9.95□□□□□ -0.82
SOX6-202ENST00000396356 ZKSCAN1P17029 563 aaPredicted RBP9.94□□□□□ -0.82
SOX6-202ENST00000396356 NUCB2P80303 420 aa9.94□□□□□ -0.82
SOX6-202ENST00000396356 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
SOX6-202ENST00000396356 FANCIQ9NVI1 1328 aa9.94□□□□□ -0.82
SOX6-202ENST00000396356 DAPK1P53355 1430 aa9.94□□□□□ -0.82
SOX6-202ENST00000396356 RRBP1Q9P2E9 1410 aaKnown RBP9.94□□□□□ -0.82
SOX6-202ENST00000396356 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
SOX6-202ENST00000396356 PDCP20941 246 aa9.94□□□□□ -0.82
SOX6-202ENST00000396356 ARXQ96QS3 562 aa9.93□□□□□ -0.82
SOX6-202ENST00000396356 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
SOX6-202ENST00000396356 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
SOX6-202ENST00000396356 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
SOX6-202ENST00000396356 DDX19BQ9UMR2 479 aa9.93□□□□□ -0.82
SOX6-202ENST00000396356 NUP155O75694 1391 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 DCAF11Q8TEB1 546 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 DIAPH3Q9NSV4 1193 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 LUC7LQ9NQ29 371 aaKnown RBP9.92□□□□□ -0.82
SOX6-202ENST00000396356 FYCO1Q9BQS8 1478 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 CCDC173Q0VFZ6 552 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 FAM161AQ3B820 660 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 CCDC66A2RUB6 948 aa9.92□□□□□ -0.82
SOX6-202ENST00000396356 ZRSR2Q15696 482 aaKnown RBP9.92□□□□□ -0.82
SOX6-202ENST00000396356 GORABQ5T7V8 394 aa9.91□□□□□ -0.82
SOX6-202ENST00000396356 SYNE3Q6ZMZ3 975 aa9.91□□□□□ -0.82
SOX6-202ENST00000396356 AKAP17AQ02040 695 aaKnown RBP9.91□□□□□ -0.82
SOX6-202ENST00000396356 HIP1O00291 1037 aa9.91□□□□□ -0.82
SOX6-202ENST00000396356 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.82
SOX6-202ENST00000396356 HSP90B2PQ58FF3 399 aa9.9□□□□□ -0.82
SOX6-202ENST00000396356 MBD3O95983 291 aa9.9□□□□□ -0.82
SOX6-202ENST00000396356 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
SOX6-202ENST00000396356 DEKP35659 375 aaKnown RBP9.9□□□□□ -0.82
SOX6-202ENST00000396356 NEXNQ0ZGT2 675 aa9.9□□□□□ -0.82
SOX6-202ENST00000396356 EVC2Q86UK5 1308 aa9.9□□□□□ -0.82
SOX6-202ENST00000396356 RAB3GAP2Q9H2M9 1393 aa9.9□□□□□ -0.82
SOX6-202ENST00000396356 ITPRIPQ8IWB1 547 aa9.9□□□□□ -0.83
SOX6-202ENST00000396356 BECN2A8MW95 431 aa9.89□□□□□ -0.83
SOX6-202ENST00000396356 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
SOX6-202ENST00000396356 API5Q9BZZ5 524 aaKnown RBP9.89□□□□□ -0.83
SOX6-202ENST00000396356 RASSF8Q8NHQ8 419 aa9.89□□□□□ -0.83
SOX6-202ENST00000396356 ZNF428Q96B54 188 aa9.89□□□□□ -0.83
SOX6-202ENST00000396356 IQCEQ6IPM2 695 aa9.89□□□□□ -0.83
SOX6-202ENST00000396356 CCDC88BA6NC98 1476 aa9.88□□□□□ -0.83
SOX6-202ENST00000396356 RRP12Q5JTH9 1297 aaKnown RBP9.88□□□□□ -0.83
SOX6-202ENST00000396356 NOL10Q9BSC4 688 aaKnown RBP9.88□□□□□ -0.83
SOX6-202ENST00000396356 VGFO15240 615 aaPredicted RBP9.88□□□□□ -0.83
SOX6-202ENST00000396356 SOGA1O94964 1423 aa9.88□□□□□ -0.83
SOX6-202ENST00000396356 ERC2O15083 957 aa9.88□□□□□ -0.83
SOX6-202ENST00000396356 SUPT6HQ7KZ85 1726 aaKnown RBP9.88□□□□□ -0.83
SOX6-202ENST00000396356 CCDC191Q8NCU4 936 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 USP8P40818 1118 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 TRIM29Q14134 588 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 SF3A1Q15459 793 aaKnown RBP9.87□□□□□ -0.83
SOX6-202ENST00000396356 DHX16O60231 1041 aaKnown RBP9.87□□□□□ -0.83
SOX6-202ENST00000396356 XBP1P17861 261 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 RGL3Q3MIN7 710 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 DDX58O95786 925 aaKnown RBP9.87□□□□□ -0.83
SOX6-202ENST00000396356 HFM1A2PYH4 1435 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
SOX6-202ENST00000396356 CLSTN1O94985 981 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 ZKSCAN2Q63HK3 967 aa9.87□□□□□ -0.83
SOX6-202ENST00000396356 HECW1Q76N89 1606 aa9.86□□□□□ -0.83
SOX6-202ENST00000396356 BRMS1Q9HCU9 246 aa9.86□□□□□ -0.83
SOX6-202ENST00000396356 H3BQV1 296 aa9.86□□□□□ -0.83
SOX6-202ENST00000396356 U2AF1L5P0DN76 240 aaPredicted RBP9.86□□□□□ -0.83
SOX6-202ENST00000396356 U2AF1Q01081 240 aaKnown RBP eCLIP9.86□□□□□ -0.83
SOX6-202ENST00000396356 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
SOX6-202ENST00000396356 KIF2AO00139 706 aaPredicted RBP9.86□□□□□ -0.83
SOX6-202ENST00000396356 TPD52L1Q16890 204 aaPredicted RBP9.86□□□□□ -0.83
SOX6-202ENST00000396356 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms