RNA–Protein interactions for RNA: ENST00000396133.7

CCNE2-202, Transcript of cyclin E2, humanhuman

TSL 1 (best) BASIC

Gene CCNE2, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-202ENST00000396133 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
CCNE2-202ENST00000396133 CDHR5Q9HBB8 845 aa13.53□□□□□ -0.24
CCNE2-202ENST00000396133 ANO8Q9HCE9 1232 aaPredicted RBP13.53□□□□□ -0.24
CCNE2-202ENST00000396133 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
CCNE2-202ENST00000396133 PHF14O94880 888 aa13.51□□□□□ -0.25
CCNE2-202ENST00000396133 EPAS1Q99814 870 aa13.51□□□□□ -0.25
CCNE2-202ENST00000396133 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
CCNE2-202ENST00000396133 MAP3K7O43318 606 aa13.48□□□□□ -0.25
CCNE2-202ENST00000396133 GIGYF2Q6Y7W6 1299 aaKnown RBP13.47□□□□□ -0.25
CCNE2-202ENST00000396133 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
CCNE2-202ENST00000396133 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
CCNE2-202ENST00000396133 NPDC1Q9NQX5 325 aaPredicted RBP13.45□□□□□ -0.26
CCNE2-202ENST00000396133 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
CCNE2-202ENST00000396133 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
CCNE2-202ENST00000396133 PCDHGA10Q9Y5H3 936 aa13.44□□□□□ -0.26
CCNE2-202ENST00000396133 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
CCNE2-202ENST00000396133 MS4A1P11836 297 aa13.41□□□□□ -0.26
CCNE2-202ENST00000396133 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
CCNE2-202ENST00000396133 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
CCNE2-202ENST00000396133 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
CCNE2-202ENST00000396133 SNPHO15079 494 aa13.4□□□□□ -0.26
CCNE2-202ENST00000396133 ZMYND15Q9H091 742 aa13.4□□□□□ -0.26
CCNE2-202ENST00000396133 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
CCNE2-202ENST00000396133 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
CCNE2-202ENST00000396133 CLCN1P35523 988 aa13.38□□□□□ -0.27
CCNE2-202ENST00000396133 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
CCNE2-202ENST00000396133 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
CCNE2-202ENST00000396133 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
CCNE2-202ENST00000396133 KDM4FA0A1W2PPD8 638 aa13.34□□□□□ -0.27
CCNE2-202ENST00000396133 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
CCNE2-202ENST00000396133 PHOX2BQ99453 314 aa13.33□□□□□ -0.27
CCNE2-202ENST00000396133 FOSBP53539 338 aa13.32□□□□□ -0.28
CCNE2-202ENST00000396133 PCMTD1Q96MG8 357 aaPredicted RBP13.32□□□□□ -0.28
CCNE2-202ENST00000396133 FLIIQ13045 1269 aa13.32□□□□□ -0.28
CCNE2-202ENST00000396133 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
CCNE2-202ENST00000396133 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
CCNE2-202ENST00000396133 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
CCNE2-202ENST00000396133 PADI6Q6TGC4 694 aa13.3□□□□□ -0.28
CCNE2-202ENST00000396133 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
CCNE2-202ENST00000396133 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
CCNE2-202ENST00000396133 ONECUT3O60422 494 aaPredicted RBP13.27□□□□□ -0.29
CCNE2-202ENST00000396133 ZNF454Q8N9F8 522 aa13.27□□□□□ -0.29
CCNE2-202ENST00000396133 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
CCNE2-202ENST00000396133 OATP04181 439 aa13.26□□□□□ -0.29
CCNE2-202ENST00000396133 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
CCNE2-202ENST00000396133 C6orf132Q5T0Z8 1188 aa13.26□□□□□ -0.29
CCNE2-202ENST00000396133 ADGRG1Q9Y653 693 aa13.26□□□□□ -0.29
CCNE2-202ENST00000396133 SSTR3P32745 418 aaPredicted RBP13.25□□□□□ -0.29
CCNE2-202ENST00000396133 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
CCNE2-202ENST00000396133 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
CCNE2-202ENST00000396133 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
CCNE2-202ENST00000396133 NUDT7P0C024 238 aa13.22□□□□□ -0.29
CCNE2-202ENST00000396133 TTC13Q8NBP0 860 aa13.22□□□□□ -0.29
CCNE2-202ENST00000396133 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
CCNE2-202ENST00000396133 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
CCNE2-202ENST00000396133 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
CCNE2-202ENST00000396133 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
CCNE2-202ENST00000396133 HOXB3P14651 431 aaPredicted RBP13.19□□□□□ -0.3
CCNE2-202ENST00000396133 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
CCNE2-202ENST00000396133 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCNE2-202ENST00000396133 EMP3P54852 163 aa13.18□□□□□ -0.3
CCNE2-202ENST00000396133 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
CCNE2-202ENST00000396133 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
CCNE2-202ENST00000396133 MCM6Q14566 821 aa13.17□□□□□ -0.3
CCNE2-202ENST00000396133 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
CCNE2-202ENST00000396133 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
CCNE2-202ENST00000396133 PRSS12P56730 875 aa13.16□□□□□ -0.3
CCNE2-202ENST00000396133 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
CCNE2-202ENST00000396133 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
CCNE2-202ENST00000396133 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
CCNE2-202ENST00000396133 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
CCNE2-202ENST00000396133 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
CCNE2-202ENST00000396133 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
CCNE2-202ENST00000396133 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
CCNE2-202ENST00000396133 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
CCNE2-202ENST00000396133 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
CCNE2-202ENST00000396133 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
CCNE2-202ENST00000396133 A6NJR5 290 aa13.1□□□□□ -0.31
CCNE2-202ENST00000396133 CLK2P49760 499 aaKnown RBP13.1□□□□□ -0.31
CCNE2-202ENST00000396133 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
CCNE2-202ENST00000396133 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
CCNE2-202ENST00000396133 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
CCNE2-202ENST00000396133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
CCNE2-202ENST00000396133 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
CCNE2-202ENST00000396133 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
CCNE2-202ENST00000396133 ARID3CA6NKF2 412 aa13.08□□□□□ -0.31
CCNE2-202ENST00000396133 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.31
CCNE2-202ENST00000396133 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.08□□□□□ -0.31
CCNE2-202ENST00000396133 LHX6Q9UPM6 363 aa13.08□□□□□ -0.31
CCNE2-202ENST00000396133 ARID3AQ99856 593 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 BCL2L12Q9HB09 334 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
CCNE2-202ENST00000396133 COL9A1P20849 921 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 DIXDC1Q155Q3 683 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 KRTAP3-3Q9BYR6 98 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 KRTAP3-2Q9BYR7 98 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
CCNE2-202ENST00000396133 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
CCNE2-202ENST00000396133 APBB1O00213 710 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms