RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 FOXD4L5Q5VV16 416 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-203ENST00000395751 FOXD4L4Q8WXT5 416 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-203ENST00000395751 NUCB2P80303 420 aa21.05■□□□□ 0.96
SREBF1-203ENST00000395751 CCDC146Q8IYE0 955 aa21.05■□□□□ 0.96
SREBF1-203ENST00000395751 STAG3Q9UJ98 1225 aa21.04■□□□□ 0.96
SREBF1-203ENST00000395751 E9PSI1 815 aa21.04■□□□□ 0.96
SREBF1-203ENST00000395751 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-203ENST00000395751 POGKQ9P215 609 aa21.04■□□□□ 0.96
SREBF1-203ENST00000395751 APBB1O00213 710 aa21.04■□□□□ 0.96
SREBF1-203ENST00000395751 PLEKHD1A6NEE1 506 aa21.03■□□□□ 0.96
SREBF1-203ENST00000395751 HAP1P54257 671 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-203ENST00000395751 SMG6Q86US8 1419 aaKnown RBP21.02■□□□□ 0.96
SREBF1-203ENST00000395751 GPS2Q13227 327 aa21.02■□□□□ 0.95
SREBF1-203ENST00000395751 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
SREBF1-203ENST00000395751 UQCRHLA0A096LP55 91 aa21■□□□□ 0.95
SREBF1-203ENST00000395751 UQCRHP07919 91 aa21■□□□□ 0.95
SREBF1-203ENST00000395751 MCM4P33991 863 aa21■□□□□ 0.95
SREBF1-203ENST00000395751 KIF7Q2M1P5 1343 aa20.99■□□□□ 0.95
SREBF1-203ENST00000395751 TPM4P67936 248 aa20.99■□□□□ 0.95
SREBF1-203ENST00000395751 ZNF592Q92610 1267 aa20.99■□□□□ 0.95
SREBF1-203ENST00000395751 ST20-MTHFSA0A0A6YYL1 179 aa20.98■□□□□ 0.95
SREBF1-203ENST00000395751 SETQ01105 290 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-203ENST00000395751 U2AF1L5P0DN76 240 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-203ENST00000395751 U2AF1Q01081 240 aaKnown RBP eCLIP20.98■□□□□ 0.95
SREBF1-203ENST00000395751 MCTP1Q6DN14 999 aa20.98■□□□□ 0.95
SREBF1-203ENST00000395751 ZSCAN30Q86W11 494 aa20.98■□□□□ 0.95
SREBF1-203ENST00000395751 OS9Q13438 667 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-203ENST00000395751 ATP6V1DQ9Y5K8 247 aa20.97■□□□□ 0.95
SREBF1-203ENST00000395751 TAF3Q5VWG9 929 aa20.97■□□□□ 0.95
SREBF1-203ENST00000395751 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
SREBF1-203ENST00000395751 EIF3AQ14152 1382 aaKnown RBP20.96■□□□□ 0.95
SREBF1-203ENST00000395751 NOL8Q76FK4 1167 aaKnown RBP20.96■□□□□ 0.95
SREBF1-203ENST00000395751 APPP05067 770 aa20.95■□□□□ 0.94
SREBF1-203ENST00000395751 AAMPQ13685 434 aa20.95■□□□□ 0.94
SREBF1-203ENST00000395751 NAP1L2Q9ULW6 460 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-203ENST00000395751 USP47Q96K76 1375 aa20.94■□□□□ 0.94
SREBF1-203ENST00000395751 ZKSCAN2Q63HK3 967 aa20.94■□□□□ 0.94
SREBF1-203ENST00000395751 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
SREBF1-203ENST00000395751 NGEFQ8N5V2 710 aa20.92■□□□□ 0.94
SREBF1-203ENST00000395751 NOM1Q5C9Z4 860 aaKnown RBP20.92■□□□□ 0.94
SREBF1-203ENST00000395751 CAVIN1Q6NZI2 390 aaKnown RBP20.92■□□□□ 0.94
SREBF1-203ENST00000395751 CLCN1P35523 988 aa20.92■□□□□ 0.94
SREBF1-203ENST00000395751 ANKRD45Q5TZF3 282 aa20.92■□□□□ 0.94
SREBF1-203ENST00000395751 BCL2L13Q9BXK5 485 aa20.92■□□□□ 0.94
SREBF1-203ENST00000395751 RNF214Q8ND24 703 aa20.91■□□□□ 0.94
SREBF1-203ENST00000395751 GOLGA6L19H0YKK7 550 aa20.91■□□□□ 0.94
SREBF1-203ENST00000395751 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
SREBF1-203ENST00000395751 FOXD4L6Q3SYB3 417 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-203ENST00000395751 FOXD4L3Q6VB84 417 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-203ENST00000395751 BRD4O60885 1362 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-203ENST00000395751 PANK3Q9H999 370 aa20.9■□□□□ 0.94
SREBF1-203ENST00000395751 RUSC2Q8N2Y8 1516 aa20.9■□□□□ 0.94
SREBF1-203ENST00000395751 TPM3P06753 285 aa20.89■□□□□ 0.93
SREBF1-203ENST00000395751 PDE4CQ08493 712 aa20.88■□□□□ 0.93
SREBF1-203ENST00000395751 CDCA7LQ96GN5 454 aa20.88■□□□□ 0.93
SREBF1-203ENST00000395751 APAF1O14727 1248 aa20.88■□□□□ 0.93
SREBF1-203ENST00000395751 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
SREBF1-203ENST00000395751 ARGLU1Q9NWB6 273 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-203ENST00000395751 HMMRO75330 724 aa20.87■□□□□ 0.93
SREBF1-203ENST00000395751 MBD3O95983 291 aa20.87■□□□□ 0.93
SREBF1-203ENST00000395751 CCDC184Q52MB2 194 aa20.87■□□□□ 0.93
SREBF1-203ENST00000395751 BECN2A8MW95 431 aa20.86■□□□□ 0.93
SREBF1-203ENST00000395751 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
SREBF1-203ENST00000395751 TRIM6-TRIM34B2RNG4 842 aa20.85■□□□□ 0.93
SREBF1-203ENST00000395751 CWC15Q9P013 229 aaKnown RBP20.85■□□□□ 0.93
SREBF1-203ENST00000395751 TAOK2Q9UL54 1235 aa20.85■□□□□ 0.93
SREBF1-203ENST00000395751 REC8O95072 547 aa20.84■□□□□ 0.93
SREBF1-203ENST00000395751 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
SREBF1-203ENST00000395751 GNL2Q13823 731 aaKnown RBP20.84■□□□□ 0.93
SREBF1-203ENST00000395751 NUP155O75694 1391 aa20.83■□□□□ 0.93
SREBF1-203ENST00000395751 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.92
SREBF1-203ENST00000395751 WASHC2CQ9Y4E1 1318 aa20.82■□□□□ 0.92
SREBF1-203ENST00000395751 CUX2O14529 1486 aa20.82■□□□□ 0.92
SREBF1-203ENST00000395751 CIZ1Q9ULV3 898 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-203ENST00000395751 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
SREBF1-203ENST00000395751 CCAR2Q8N163 923 aaKnown RBP20.81■□□□□ 0.92
SREBF1-203ENST00000395751 ZHX1Q9UKY1 873 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-203ENST00000395751 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
SREBF1-203ENST00000395751 KIF3AQ9Y496 699 aa20.8■□□□□ 0.92
SREBF1-203ENST00000395751 UACAQ9BZF9 1416 aa20.8■□□□□ 0.92
SREBF1-203ENST00000395751 PANK1Q8TE04 598 aa20.79■□□□□ 0.92
SREBF1-203ENST00000395751 NOC3LQ8WTT2 800 aaKnown RBP20.78■□□□□ 0.92
SREBF1-203ENST00000395751 TSPY26PQ9H489 355 aa20.78■□□□□ 0.92
SREBF1-203ENST00000395751 PDCL2Q8N4E4 241 aa20.78■□□□□ 0.92
SREBF1-203ENST00000395751 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.92
SREBF1-203ENST00000395751 SASS6Q6UVJ0 657 aa20.77■□□□□ 0.92
SREBF1-203ENST00000395751 HOMER1Q86YM7 354 aa20.77■□□□□ 0.92
SREBF1-203ENST00000395751 RRBP1Q9P2E9 1410 aaKnown RBP20.76■□□□□ 0.91
SREBF1-203ENST00000395751 PDZRN3Q9UPQ7 1066 aa20.76■□□□□ 0.91
SREBF1-203ENST00000395751 LNPKQ9C0E8 428 aa20.75■□□□□ 0.91
SREBF1-203ENST00000395751 CBX1P83916 185 aa20.75■□□□□ 0.91
SREBF1-203ENST00000395751 PDE3AQ14432 1141 aa20.75■□□□□ 0.91
SREBF1-203ENST00000395751 MNS1Q8NEH6 495 aa20.75■□□□□ 0.91
SREBF1-203ENST00000395751 BBXQ8WY36 941 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-203ENST00000395751 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
SREBF1-203ENST00000395751 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
SREBF1-203ENST00000395751 LETM1O95202 739 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-203ENST00000395751 TPD52L1Q16890 204 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-203ENST00000395751 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-203ENST00000395751 DYNC1I1O14576 645 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms