RNA–Protein interactions for RNA: ENST00000395603.7

ATRX-202, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRX, Length 10,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-202ENST00000395603 FHOD3Q2V2M9 1422 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 WDR7Q9Y4E6 1490 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 CDR1P51861 262 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 TMF1P82094 1093 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 KNSTRNQ9Y448 316 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 KIF15Q9NS87 1388 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 SUPT6HQ7KZ85 1726 aaKnown RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 NSD2O96028 1365 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 NBR1Q14596 966 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 LETM1O95202 739 aaPredicted RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 MSNP26038 577 aaKnown RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 CCDC136Q96JN2 1154 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 SMC4Q9NTJ3 1288 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 ITSN2Q9NZM3 1697 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 CECR2Q9BXF3 1484 aa6.6□□□□□ -1.35
ATRX-202ENST00000395603 KIF2AO00139 706 aaPredicted RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 TRHP20396 242 aaPredicted RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 HMGN5P82970 282 aaKnown RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 CNGB1Q14028 1251 aaPredicted RBP6.6□□□□□ -1.35
ATRX-202ENST00000395603 FANCIQ9NVI1 1328 aa6.59□□□□□ -1.35
ATRX-202ENST00000395603 CFTRP13569 1480 aa6.59□□□□□ -1.35
ATRX-202ENST00000395603 PIP4K2AP48426 406 aaPredicted RBP6.59□□□□□ -1.35
ATRX-202ENST00000395603 TUBBP07437 444 aa6.59□□□□□ -1.35
ATRX-202ENST00000395603 EIF2AK4Q9P2K8 1649 aaKnown RBP6.59□□□□□ -1.35
ATRX-202ENST00000395603 IGSF3O75054 1194 aa6.59□□□□□ -1.35
ATRX-202ENST00000395603 ATAD2BQ9ULI0 1458 aa6.59□□□□□ -1.35
ATRX-202ENST00000395603 RPGRIP1LQ68CZ1 1315 aa6.59□□□□□ -1.36
ATRX-202ENST00000395603 EPB41L2O43491 1005 aaKnown RBP6.59□□□□□ -1.36
ATRX-202ENST00000395603 NCOA2Q15596 1464 aa6.58□□□□□ -1.36
ATRX-202ENST00000395603 NLRP13Q86W25 1043 aa6.58□□□□□ -1.36
ATRX-202ENST00000395603 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
ATRX-202ENST00000395603 ACBD3Q9H3P7 528 aa6.58□□□□□ -1.36
ATRX-202ENST00000395603 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
ATRX-202ENST00000395603 SH3BGRP55822 239 aaPredicted RBP6.58□□□□□ -1.36
ATRX-202ENST00000395603 DNMBPQ6XZF7 1577 aa6.58□□□□□ -1.36
ATRX-202ENST00000395603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.57□□□□□ -1.36
ATRX-202ENST00000395603 HNRNPUL2Q1KMD3 747 aaKnown RBP6.57□□□□□ -1.36
ATRX-202ENST00000395603 A6NNZ2 444 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 TUBB8Q3ZCM7 444 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 ARHGEF12Q9NZN5 1544 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 BIVM-ERCC5R4GMW8 1640 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 GTF2F1P35269 517 aaKnown RBP eCLIP6.57□□□□□ -1.366e-9■■■■■ 35.5
ATRX-202ENST00000395603 ZMYND15Q9H091 742 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 KIAA2012Q0VF49 1180 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 GPATCH3Q96I76 525 aa6.57□□□□□ -1.36
ATRX-202ENST00000395603 RWDD1Q9H446 243 aaPredicted RBP6.57□□□□□ -1.36
ATRX-202ENST00000395603 NPM2Q86SE8 214 aaKnown RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 CIZ1Q9ULV3 898 aaPredicted RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 PLEKHH1Q9ULM0 1364 aa6.56□□□□□ -1.36
ATRX-202ENST00000395603 GOLGA6L4A6NEF3 574 aa6.56□□□□□ -1.36
ATRX-202ENST00000395603 UHRF1BP1Q6BDS2 1440 aa6.56□□□□□ -1.36
ATRX-202ENST00000395603 RDXP35241 583 aaKnown RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 HSP90AB4PQ58FF6 505 aa6.56□□□□□ -1.36
ATRX-202ENST00000395603 FAM184AQ8NB25 1140 aa6.56□□□□□ -1.36
ATRX-202ENST00000395603 HOOK1Q9UJC3 728 aaKnown RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 CCDC70Q6NSX1 233 aa6.56□□□□□ -1.36
ATRX-202ENST00000395603 MAGI1Q96QZ7 1491 aaPredicted RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 ZNF526Q8TF50 670 aaPredicted RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 SALL2Q9Y467 1007 aaPredicted RBP6.56□□□□□ -1.36
ATRX-202ENST00000395603 BRD4O60885 1362 aaPredicted RBP6.55□□□□□ -1.36
ATRX-202ENST00000395603 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
ATRX-202ENST00000395603 FMNL3Q8IVF7 1028 aa6.55□□□□□ -1.36
ATRX-202ENST00000395603 FAM107BQ9H098 131 aa6.55□□□□□ -1.36
ATRX-202ENST00000395603 GZF1Q9H116 711 aaPredicted RBP6.55□□□□□ -1.36
ATRX-202ENST00000395603 SHANK2Q9UPX8 1470 aa6.54□□□□□ -1.36
ATRX-202ENST00000395603 NESP48681 1621 aa6.54□□□□□ -1.36
ATRX-202ENST00000395603 IPO9Q96P70 1041 aaKnown RBP6.54□□□□□ -1.36
ATRX-202ENST00000395603 SBNO1A3KN83 1393 aa6.54□□□□□ -1.36
ATRX-202ENST00000395603 GTF2E1P29083 439 aaPredicted RBP6.54□□□□□ -1.36
ATRX-202ENST00000395603 MCM5P33992 734 aa6.54□□□□□ -1.36
ATRX-202ENST00000395603 EFCAB2Q5VUJ9 269 aa6.54□□□□□ -1.36
ATRX-202ENST00000395603 FGD5Q6ZNL6 1462 aa6.54□□□□□ -1.36
ATRX-202ENST00000395603 MYO6Q9UM54 1294 aa6.53□□□□□ -1.36
ATRX-202ENST00000395603 GRIN2BQ13224 1484 aa6.53□□□□□ -1.36
ATRX-202ENST00000395603 TERF2IPQ9NYB0 399 aa6.53□□□□□ -1.36
ATRX-202ENST00000395603 ABCC11Q96J66 1382 aa6.53□□□□□ -1.36
ATRX-202ENST00000395603 MPNDQ8N594 471 aa6.53□□□□□ -1.36
ATRX-202ENST00000395603 USP8P40818 1118 aa6.53□□□□□ -1.36
ATRX-202ENST00000395603 HOMEZQ8IX15 550 aa6.52□□□□□ -1.37
ATRX-202ENST00000395603 PPP4R3BQ5MIZ7 849 aa6.52□□□□□ -1.37
ATRX-202ENST00000395603 ERCC4Q92889 916 aaPredicted RBP6.52□□□□□ -1.37
ATRX-202ENST00000395603 ATP1B4Q9UN42 357 aaPredicted RBP6.52□□□□□ -1.37
ATRX-202ENST00000395603 IQSEC3Q9UPP2 1182 aaPredicted RBP6.52□□□□□ -1.37
ATRX-202ENST00000395603 EIF4G1Q04637 1599 aaKnown RBP6.52□□□□□ -1.37
ATRX-202ENST00000395603 CFDP1Q9UEE9 299 aaPredicted RBP6.52□□□□□ -1.37
ATRX-202ENST00000395603 HIP1O00291 1037 aa6.52□□□□□ -1.37
ATRX-202ENST00000395603 PDCP20941 246 aa6.52□□□□□ -1.37
ATRX-202ENST00000395603 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATRX-202ENST00000395603 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.37
ATRX-202ENST00000395603 DDX12PQ92771 950 aa6.52□□□□□ -1.37
ATRX-202ENST00000395603 MBD3O95983 291 aa6.52□□□□□ -1.37
ATRX-202ENST00000395603 PRXQ9BXM0 1461 aa6.51□□□□□ -1.37
ATRX-202ENST00000395603 ABCA10Q8WWZ4 1543 aa6.51□□□□□ -1.37
ATRX-202ENST00000395603 CENPQQ7L2Z9 268 aaPredicted RBP6.51□□□□□ -1.37
ATRX-202ENST00000395603 HSCBQ8IWL3 235 aa6.51□□□□□ -1.37
ATRX-202ENST00000395603 REC8O95072 547 aa6.51□□□□□ -1.37
ATRX-202ENST00000395603 TPM1P09493 284 aa6.51□□□□□ -1.37
ATRX-202ENST00000395603 RBM26Q5T8P6 1007 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms