RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 IFFO2Q5TF58 517 aa5.47□□□□□ -1.53
RNU6-1228P-201ENST00000391014 NBPF3Q9H094 633 aa5.47□□□□□ -1.53
RNU6-1228P-201ENST00000391014 KIAA1468Q9P260 1216 aa5.47□□□□□ -1.53
RNU6-1228P-201ENST00000391014 BCAMP50895 628 aa5.46□□□□□ -1.54
RNU6-1228P-201ENST00000391014 DDX12PQ92771 950 aa5.45□□□□□ -1.54
RNU6-1228P-201ENST00000391014 FBXW7Q969H0 707 aa5.45□□□□□ -1.54
RNU6-1228P-201ENST00000391014 A0A0G2JS52 829 aa5.44□□□□□ -1.54
RNU6-1228P-201ENST00000391014 RBM33Q96EV2 1170 aaKnown RBP5.44□□□□□ -1.54
RNU6-1228P-201ENST00000391014 ZFRQ96KR1 1074 aaKnown RBP5.44□□□□□ -1.54
RNU6-1228P-201ENST00000391014 SEPT9Q9UHD8 586 aaPredicted RBP5.44□□□□□ -1.54
RNU6-1228P-201ENST00000391014 SOWAHBA6NEL2 793 aa5.43□□□□□ -1.54
RNU6-1228P-201ENST00000391014 ANKK1Q8NFD2 765 aa5.43□□□□□ -1.54
RNU6-1228P-201ENST00000391014 TRIM6-TRIM34B2RNG4 842 aa5.42□□□□□ -1.54
RNU6-1228P-201ENST00000391014 PRIM1P49642 420 aaKnown RBP5.42□□□□□ -1.54
RNU6-1228P-201ENST00000391014 TSR1Q2NL82 804 aaKnown RBP5.42□□□□□ -1.54
RNU6-1228P-201ENST00000391014 LAPTM4BQ86VI4 370 aa5.42□□□□□ -1.54
RNU6-1228P-201ENST00000391014 EPAS1Q99814 870 aa5.42□□□□□ -1.54
RNU6-1228P-201ENST00000391014 WBP1LQ9NX94 342 aa5.42□□□□□ -1.54
RNU6-1228P-201ENST00000391014 ONECUT3O60422 494 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1228P-201ENST00000391014 ITGBL1O95965 494 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1228P-201ENST00000391014 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1228P-201ENST00000391014 RGS20O76081 388 aa5.4□□□□□ -1.54
RNU6-1228P-201ENST00000391014 TSKSQ9UJT2 592 aa5.4□□□□□ -1.54
RNU6-1228P-201ENST00000391014 C3orf80F5H4A9 247 aa5.39□□□□□ -1.55
RNU6-1228P-201ENST00000391014 EN1Q05925 392 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1228P-201ENST00000391014 NBR1Q14596 966 aa5.39□□□□□ -1.55
RNU6-1228P-201ENST00000391014 PDIA6Q15084 440 aa5.39□□□□□ -1.55
RNU6-1228P-201ENST00000391014 IRX2Q9BZI1 471 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1228P-201ENST00000391014 FAM198AQ9UFP1 575 aa5.39□□□□□ -1.55
RNU6-1228P-201ENST00000391014 SMAPO00193 183 aa5.38□□□□□ -1.55
RNU6-1228P-201ENST00000391014 FAM98CQ17RN3 349 aaKnown RBP5.38□□□□□ -1.55
RNU6-1228P-201ENST00000391014 MAP3K7O43318 606 aa5.37□□□□□ -1.55
RNU6-1228P-201ENST00000391014 SPRYD3Q8NCJ5 442 aa5.36□□□□□ -1.55
RNU6-1228P-201ENST00000391014 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.36□□□□□ -1.55
RNU6-1228P-201ENST00000391014 TSR3Q9UJK0 312 aaKnown RBP5.36□□□□□ -1.55
RNU6-1228P-201ENST00000391014 HPS5Q9UPZ3 1129 aa5.36□□□□□ -1.55
RNU6-1228P-201ENST00000391014 GRXCR2A6NFK2 248 aa5.35□□□□□ -1.55
RNU6-1228P-201ENST00000391014 KCNC4Q03721 635 aa5.35□□□□□ -1.55
RNU6-1228P-201ENST00000391014 E2F4Q16254 413 aa5.35□□□□□ -1.55
RNU6-1228P-201ENST00000391014 CDCA7LQ96GN5 454 aa5.35□□□□□ -1.55
RNU6-1228P-201ENST00000391014 SPDYE16A6NNV3 312 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1228P-201ENST00000391014 PRSS12P56730 875 aa5.34□□□□□ -1.55
RNU6-1228P-201ENST00000391014 NYAP1Q6ZVC0 841 aa5.34□□□□□ -1.55
RNU6-1228P-201ENST00000391014 PACS2Q86VP3 889 aa5.34□□□□□ -1.55
RNU6-1228P-201ENST00000391014 LRCH3Q96II8 777 aa5.34□□□□□ -1.55
RNU6-1228P-201ENST00000391014 CDHR5Q9HBB8 845 aa5.34□□□□□ -1.55
RNU6-1228P-201ENST00000391014 OSBPP22059 807 aa5.33□□□□□ -1.56
RNU6-1228P-201ENST00000391014 SAMD7Q7Z3H4 446 aa5.33□□□□□ -1.56
RNU6-1228P-201ENST00000391014 TJAP1Q5JTD0 557 aa5.32□□□□□ -1.56
RNU6-1228P-201ENST00000391014 PAXIP1Q6ZW49 1069 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1228P-201ENST00000391014 TATDN2Q93075 761 aa5.32□□□□□ -1.56
RNU6-1228P-201ENST00000391014 CFAP44Q96MT7 982 aa5.32□□□□□ -1.56
RNU6-1228P-201ENST00000391014 ARIH1Q9Y4X5 557 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1228P-201ENST00000391014 PPP4CP60510 307 aa5.31□□□□□ -1.56
RNU6-1228P-201ENST00000391014 PNMA3Q9UL41 463 aa5.31□□□□□ -1.56
RNU6-1228P-201ENST00000391014 LCE2BO14633 110 aa5.3□□□□□ -1.56
RNU6-1228P-201ENST00000391014 NUDT18Q6ZVK8 323 aa5.3□□□□□ -1.56
RNU6-1228P-201ENST00000391014 RTN4Q9NQC3 1192 aaKnown RBP5.3□□□□□ -1.56
RNU6-1228P-201ENST00000391014 NPDC1Q9NQX5 325 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1228P-201ENST00000391014 ZNF516Q92618 1163 aa5.29□□□□□ -1.56
RNU6-1228P-201ENST00000391014 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.29□□□□□ -1.56
RNU6-1228P-201ENST00000391014 CERKQ8TCT0 537 aa5.28□□□□□ -1.56
RNU6-1228P-201ENST00000391014 MTRQ99707 1265 aa5.28□□□□□ -1.56
RNU6-1228P-201ENST00000391014 WDR70Q9NW82 654 aa5.28□□□□□ -1.56
RNU6-1228P-201ENST00000391014 APLP1P51693 650 aa5.27□□□□□ -1.57
RNU6-1228P-201ENST00000391014 PPP1R18Q6NYC8 613 aa5.27□□□□□ -1.57
RNU6-1228P-201ENST00000391014 Q6ZNB5 142 aa5.27□□□□□ -1.57
RNU6-1228P-201ENST00000391014 TTC13Q8NBP0 860 aa5.27□□□□□ -1.57
RNU6-1228P-201ENST00000391014 NKX2-3Q8TAU0 364 aa5.27□□□□□ -1.57
RNU6-1228P-201ENST00000391014 PADI6Q6TGC4 694 aa5.26□□□□□ -1.57
RNU6-1228P-201ENST00000391014 NBPF26B4DH59 902 aa5.25□□□□□ -1.57
RNU6-1228P-201ENST00000391014 MLLT3P42568 568 aaPredicted RBP5.25□□□□□ -1.57
RNU6-1228P-201ENST00000391014 SWT1Q5T5J6 900 aaKnown RBP5.25□□□□□ -1.57
RNU6-1228P-201ENST00000391014 IL21Q9HBE4 155 aa5.25□□□□□ -1.57
RNU6-1228P-201ENST00000391014 GFRA3O60609 400 aa5.24□□□□□ -1.57
RNU6-1228P-201ENST00000391014 RNF40O75150 1001 aa5.24□□□□□ -1.57
RNU6-1228P-201ENST00000391014 EYA1Q99502 592 aa5.24□□□□□ -1.57
RNU6-1228P-201ENST00000391014 PRKD2Q9BZL6 878 aa5.24□□□□□ -1.57
RNU6-1228P-201ENST00000391014 RBM27Q9P2N5 1060 aaKnown RBP5.24□□□□□ -1.57
RNU6-1228P-201ENST00000391014 AMER1Q5JTC6 1135 aaPredicted RBP5.23□□□□□ -1.57
RNU6-1228P-201ENST00000391014 COPS2P61201 443 aa5.22□□□□□ -1.57
RNU6-1228P-201ENST00000391014 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.22□□□□□ -1.57
RNU6-1228P-201ENST00000391014 TSHZ2Q9NRE2 1034 aa5.22□□□□□ -1.57
RNU6-1228P-201ENST00000391014 HDGFP51858 240 aaKnown RBP5.21□□□□□ -1.58
RNU6-1228P-201ENST00000391014 TRAF7Q6Q0C0 670 aa5.21□□□□□ -1.58
RNU6-1228P-201ENST00000391014 KCNV2Q8TDN2 545 aa5.2□□□□□ -1.58
RNU6-1228P-201ENST00000391014 PTGDRQ13258 359 aa5.19□□□□□ -1.58
RNU6-1228P-201ENST00000391014 FAM161AQ3B820 660 aa5.19□□□□□ -1.58
RNU6-1228P-201ENST00000391014 EMID1Q96A84 441 aaPredicted RBP5.19□□□□□ -1.58
RNU6-1228P-201ENST00000391014 V9GY48 417 aaPredicted RBP5.19□□□□□ -1.58
RNU6-1228P-201ENST00000391014 ZPR1O75312 459 aa5.18□□□□□ -1.58
RNU6-1228P-201ENST00000391014 LAPTM4AQ15012 233 aa5.18□□□□□ -1.58
RNU6-1228P-201ENST00000391014 SLF2Q8IX21 1173 aa5.18□□□□□ -1.58
RNU6-1228P-201ENST00000391014 ARHGEF1Q92888 912 aaKnown RBP5.18□□□□□ -1.58
RNU6-1228P-201ENST00000391014 NRG2O14511 850 aaPredicted RBP5.17□□□□□ -1.58
RNU6-1228P-201ENST00000391014 BLOC1S3Q6QNY0 202 aa5.17□□□□□ -1.58
RNU6-1228P-201ENST00000391014 TRIM67Q6ZTA4 783 aa5.16□□□□□ -1.58
RNU6-1228P-201ENST00000391014 ADGRG1Q9Y653 693 aa5.16□□□□□ -1.58
RNU6-1228P-201ENST00000391014 RNF223E7ERA6 249 aa5.15□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PPEF1O14829 653 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms