RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 GNPATO15228 680 aa9.78□□□□□ -0.84
SNORA40.2-201ENST00000390847 HIC1Q14526 733 aa9.78□□□□□ -0.84
SNORA40.2-201ENST00000390847 EMP3P54852 163 aa9.77□□□□□ -0.85
SNORA40.2-201ENST00000390847 C6orf132Q5T0Z8 1188 aa9.77□□□□□ -0.85
SNORA40.2-201ENST00000390847 ERBB3P21860 1342 aa9.77□□□□□ -0.85
SNORA40.2-201ENST00000390847 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
SNORA40.2-201ENST00000390847 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
SNORA40.2-201ENST00000390847 NPDC1Q9NQX5 325 aaPredicted RBP9.74□□□□□ -0.85
SNORA40.2-201ENST00000390847 FECHP22830 423 aa9.73□□□□□ -0.85
SNORA40.2-201ENST00000390847 CERKQ8TCT0 537 aa9.73□□□□□ -0.85
SNORA40.2-201ENST00000390847 AK7Q96M32 723 aa9.73□□□□□ -0.85
SNORA40.2-201ENST00000390847 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
SNORA40.2-201ENST00000390847 PTPREP23469 700 aa9.72□□□□□ -0.85
SNORA40.2-201ENST00000390847 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
SNORA40.2-201ENST00000390847 KCNH8Q96L42 1107 aa9.72□□□□□ -0.85
SNORA40.2-201ENST00000390847 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
SNORA40.2-201ENST00000390847 KCNK17Q96T54 332 aa9.71□□□□□ -0.86
SNORA40.2-201ENST00000390847 FAM205CA6NFA0 338 aa9.7□□□□□ -0.86
SNORA40.2-201ENST00000390847 IRF6O14896 467 aa9.69□□□□□ -0.86
SNORA40.2-201ENST00000390847 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
SNORA40.2-201ENST00000390847 COL9A1P20849 921 aa9.68□□□□□ -0.86
SNORA40.2-201ENST00000390847 PADI6Q6TGC4 694 aa9.68□□□□□ -0.86
SNORA40.2-201ENST00000390847 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
SNORA40.2-201ENST00000390847 PRSS12P56730 875 aa9.66□□□□□ -0.86
SNORA40.2-201ENST00000390847 NEUROD2Q15784 382 aa9.66□□□□□ -0.86
SNORA40.2-201ENST00000390847 CDCA7LQ96GN5 454 aa9.66□□□□□ -0.86
SNORA40.2-201ENST00000390847 TRIM66O15016 1216 aa9.65□□□□□ -0.86
SNORA40.2-201ENST00000390847 PSEN2P49810 448 aa9.64□□□□□ -0.87
SNORA40.2-201ENST00000390847 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
SNORA40.2-201ENST00000390847 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
SNORA40.2-201ENST00000390847 FAM161AQ3B820 660 aa9.63□□□□□ -0.87
SNORA40.2-201ENST00000390847 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
SNORA40.2-201ENST00000390847 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
SNORA40.2-201ENST00000390847 ARHGAP33O14559 1287 aa9.62□□□□□ -0.87
SNORA40.2-201ENST00000390847 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
SNORA40.2-201ENST00000390847 PDE4DQ08499 809 aa9.61□□□□□ -0.87
SNORA40.2-201ENST00000390847 ZNF687Q8N1G0 1237 aa9.61□□□□□ -0.87
SNORA40.2-201ENST00000390847 OATP04181 439 aa9.6□□□□□ -0.87
SNORA40.2-201ENST00000390847 PBX2P40425 430 aa9.6□□□□□ -0.87
SNORA40.2-201ENST00000390847 TTLL12Q14166 644 aaPredicted RBP9.6□□□□□ -0.87
SNORA40.2-201ENST00000390847 PROX2Q3B8N5 592 aa9.6□□□□□ -0.87
SNORA40.2-201ENST00000390847 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
SNORA40.2-201ENST00000390847 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
SNORA40.2-201ENST00000390847 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
SNORA40.2-201ENST00000390847 PACS2Q86VP3 889 aa9.59□□□□□ -0.87
SNORA40.2-201ENST00000390847 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
SNORA40.2-201ENST00000390847 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
SNORA40.2-201ENST00000390847 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
SNORA40.2-201ENST00000390847 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
SNORA40.2-201ENST00000390847 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
SNORA40.2-201ENST00000390847 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
SNORA40.2-201ENST00000390847 FAM198AQ9UFP1 575 aa9.58□□□□□ -0.88
SNORA40.2-201ENST00000390847 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
SNORA40.2-201ENST00000390847 AMHR2Q16671 573 aa9.57□□□□□ -0.88
SNORA40.2-201ENST00000390847 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
SNORA40.2-201ENST00000390847 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
SNORA40.2-201ENST00000390847 ZBED2Q9BTP6 218 aa9.57□□□□□ -0.88
SNORA40.2-201ENST00000390847 NUDT18Q6ZVK8 323 aa9.56□□□□□ -0.88
SNORA40.2-201ENST00000390847 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
SNORA40.2-201ENST00000390847 MDM2Q00987 491 aaPredicted RBP9.55□□□□□ -0.88
SNORA40.2-201ENST00000390847 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
SNORA40.2-201ENST00000390847 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
SNORA40.2-201ENST00000390847 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
SNORA40.2-201ENST00000390847 KIAA1468Q9P260 1216 aa9.55□□□□□ -0.88
SNORA40.2-201ENST00000390847 PARP9Q8IXQ6 854 aa9.54□□□□□ -0.88
SNORA40.2-201ENST00000390847 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
SNORA40.2-201ENST00000390847 TATDN2Q93075 761 aa9.54□□□□□ -0.88
SNORA40.2-201ENST00000390847 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
SNORA40.2-201ENST00000390847 SMAPO00193 183 aa9.52□□□□□ -0.89
SNORA40.2-201ENST00000390847 CLCN1P35523 988 aa9.52□□□□□ -0.89
SNORA40.2-201ENST00000390847 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
SNORA40.2-201ENST00000390847 EYA1Q99502 592 aa9.51□□□□□ -0.89
SNORA40.2-201ENST00000390847 SLC4A5Q9BY07 1137 aa9.51□□□□□ -0.89
SNORA40.2-201ENST00000390847 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
SNORA40.2-201ENST00000390847 RABGEF1Q9UJ41 708 aa9.51□□□□□ -0.89
SNORA40.2-201ENST00000390847 VPS9D1Q9Y2B5 631 aa9.51□□□□□ -0.89
SNORA40.2-201ENST00000390847 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
SNORA40.2-201ENST00000390847 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
SNORA40.2-201ENST00000390847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
SNORA40.2-201ENST00000390847 LSM11P83369 360 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNORA40.2-201ENST00000390847 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
SNORA40.2-201ENST00000390847 DNAJB2P25686 324 aa9.48□□□□□ -0.89
SNORA40.2-201ENST00000390847 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
SNORA40.2-201ENST00000390847 TK2O00142 265 aa9.47□□□□□ -0.89
SNORA40.2-201ENST00000390847 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
SNORA40.2-201ENST00000390847 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
SNORA40.2-201ENST00000390847 NBPF3Q9H094 633 aa9.47□□□□□ -0.89
SNORA40.2-201ENST00000390847 TMEM132AQ24JP5 1023 aa9.46□□□□□ -0.9
SNORA40.2-201ENST00000390847 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.9
SNORA40.2-201ENST00000390847 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
SNORA40.2-201ENST00000390847 SSTR3P32745 418 aaPredicted RBP9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 FAM117AQ9C073 453 aa9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 TMEM134Q9H6X4 195 aa9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
SNORA40.2-201ENST00000390847 MS4A1P11836 297 aa9.43□□□□□ -0.9
SNORA40.2-201ENST00000390847 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms