RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 RSPH4AQ5TD94 716 aa18.59■□□□□ 0.57
PSME4-201ENST00000389993 CHMP3Q9Y3E7 222 aa18.58■□□□□ 0.57
PSME4-201ENST00000389993 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
PSME4-201ENST00000389993 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.56
PSME4-201ENST00000389993 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
PSME4-201ENST00000389993 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
PSME4-201ENST00000389993 SLKQ9H2G2 1235 aaPredicted RBP18.57■□□□□ 0.56
PSME4-201ENST00000389993 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
PSME4-201ENST00000389993 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
PSME4-201ENST00000389993 NGEFQ8N5V2 710 aa18.56■□□□□ 0.56
PSME4-201ENST00000389993 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
PSME4-201ENST00000389993 APAF1O14727 1248 aa18.55■□□□□ 0.56
PSME4-201ENST00000389993 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
PSME4-201ENST00000389993 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
PSME4-201ENST00000389993 MFAP1P55081 439 aaKnown RBP18.54■□□□□ 0.56
PSME4-201ENST00000389993 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
PSME4-201ENST00000389993 NBPF1Q3BBV0 1214 aa18.53■□□□□ 0.56
PSME4-201ENST00000389993 TSHZ2Q9NRE2 1034 aa18.53■□□□□ 0.56
PSME4-201ENST00000389993 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
PSME4-201ENST00000389993 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
PSME4-201ENST00000389993 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
PSME4-201ENST00000389993 HMOX1P09601 288 aa18.52■□□□□ 0.55
PSME4-201ENST00000389993 SLC4A3P48751 1232 aa18.52■□□□□ 0.55
PSME4-201ENST00000389993 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
PSME4-201ENST00000389993 GOLGA6L22H0YM25 854 aa18.51■□□□□ 0.55
PSME4-201ENST00000389993 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
PSME4-201ENST00000389993 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
PSME4-201ENST00000389993 GZF1Q9H116 711 aaPredicted RBP18.5■□□□□ 0.55
PSME4-201ENST00000389993 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
PSME4-201ENST00000389993 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
PSME4-201ENST00000389993 MS4A1P11836 297 aa18.5■□□□□ 0.55
PSME4-201ENST00000389993 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
PSME4-201ENST00000389993 CFAP70Q5T0N1 1121 aa18.49■□□□□ 0.55
PSME4-201ENST00000389993 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
PSME4-201ENST00000389993 TRIM44Q96DX7 344 aaPredicted RBP18.48■□□□□ 0.55
PSME4-201ENST00000389993 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
PSME4-201ENST00000389993 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
PSME4-201ENST00000389993 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
PSME4-201ENST00000389993 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
PSME4-201ENST00000389993 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
PSME4-201ENST00000389993 PTMAP06454 111 aaKnown RBP18.47■□□□□ 0.55
PSME4-201ENST00000389993 HSCBQ8IWL3 235 aa18.47■□□□□ 0.55
PSME4-201ENST00000389993 COG6Q9Y2V7 657 aa18.47■□□□□ 0.55
PSME4-201ENST00000389993 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
PSME4-201ENST00000389993 TRIM6-TRIM34B2RNG4 842 aa18.46■□□□□ 0.55
PSME4-201ENST00000389993 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
PSME4-201ENST00000389993 COG3Q96JB2 828 aa18.46■□□□□ 0.55
PSME4-201ENST00000389993 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
PSME4-201ENST00000389993 ISY1Q9ULR0 285 aaKnown RBP18.45■□□□□ 0.54
PSME4-201ENST00000389993 EIF2S2P20042 333 aaKnown RBP18.45■□□□□ 0.54
PSME4-201ENST00000389993 FOXD4L5Q5VV16 416 aaPredicted RBP18.45■□□□□ 0.54
PSME4-201ENST00000389993 FOXD4L4Q8WXT5 416 aaPredicted RBP18.45■□□□□ 0.54
PSME4-201ENST00000389993 STK31Q9BXU1 1019 aa18.44■□□□□ 0.54
PSME4-201ENST00000389993 UACAQ9BZF9 1416 aa18.43■□□□□ 0.54
PSME4-201ENST00000389993 CGNL1Q0VF96 1302 aa18.42■□□□□ 0.54
PSME4-201ENST00000389993 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
PSME4-201ENST00000389993 FYCO1Q9BQS8 1478 aa18.41■□□□□ 0.54
PSME4-201ENST00000389993 CCDC7Q96M83 1385 aa18.41■□□□□ 0.54
PSME4-201ENST00000389993 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
PSME4-201ENST00000389993 PRXQ9BXM0 1461 aa18.39■□□□□ 0.54
PSME4-201ENST00000389993 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
PSME4-201ENST00000389993 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
PSME4-201ENST00000389993 CHMP4BQ9H444 224 aaKnown RBP18.39■□□□□ 0.53
PSME4-201ENST00000389993 PMFBP1Q8TBY8 1022 aa18.39■□□□□ 0.53
PSME4-201ENST00000389993 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
PSME4-201ENST00000389993 ZRSR1Q15695 479 aaKnown RBP18.38■□□□□ 0.53
PSME4-201ENST00000389993 SCAPERQ9BY12 1400 aa18.38■□□□□ 0.53
PSME4-201ENST00000389993 RIPK4P57078 832 aa18.38■□□□□ 0.53
PSME4-201ENST00000389993 PSME1Q06323 249 aa18.37■□□□□ 0.53
PSME4-201ENST00000389993 DNTTIP2Q5QJE6 756 aaKnown RBP18.37■□□□□ 0.53
PSME4-201ENST00000389993 RRP1P56182 461 aaKnown RBP18.36■□□□□ 0.53
PSME4-201ENST00000389993 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
PSME4-201ENST00000389993 TXNDC2Q86VQ3 553 aa18.36■□□□□ 0.53
PSME4-201ENST00000389993 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
PSME4-201ENST00000389993 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
PSME4-201ENST00000389993 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
PSME4-201ENST00000389993 EVA1CP58658 441 aa18.35■□□□□ 0.53
PSME4-201ENST00000389993 ANKRD45Q5TZF3 282 aa18.35■□□□□ 0.53
PSME4-201ENST00000389993 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
PSME4-201ENST00000389993 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
PSME4-201ENST00000389993 DEKP35659 375 aaKnown RBP18.34■□□□□ 0.53
PSME4-201ENST00000389993 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.53
PSME4-201ENST00000389993 PCF11O94913 1555 aaKnown RBP18.33■□□□□ 0.53
PSME4-201ENST00000389993 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.53
PSME4-201ENST00000389993 GORABQ5T7V8 394 aa18.33■□□□□ 0.52
PSME4-201ENST00000389993 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.52
PSME4-201ENST00000389993 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 RRBP1Q9P2E9 1410 aaKnown RBP18.32■□□□□ 0.52
PSME4-201ENST00000389993 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
PSME4-201ENST00000389993 DNMBPQ6XZF7 1577 aa18.31■□□□□ 0.52
PSME4-201ENST00000389993 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
PSME4-201ENST00000389993 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
PSME4-201ENST00000389993 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
PSME4-201ENST00000389993 WDR97A6NE52 1622 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms