RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
RNU6-48P-201ENST00000384161 WBP1LQ9NX94 342 aa7.3□□□□□ -1.24
RNU6-48P-201ENST00000384161 PCDHGA10Q9Y5H3 936 aa7.3□□□□□ -1.24
RNU6-48P-201ENST00000384161 KCNC4Q03721 635 aa7.29□□□□□ -1.24
RNU6-48P-201ENST00000384161 ZFRQ96KR1 1074 aaKnown RBP7.28□□□□□ -1.24
RNU6-48P-201ENST00000384161 ONECUT3O60422 494 aaPredicted RBP7.27□□□□□ -1.25
RNU6-48P-201ENST00000384161 KIAA1468Q9P260 1216 aa7.26□□□□□ -1.25
RNU6-48P-201ENST00000384161 GFRA3O60609 400 aa7.25□□□□□ -1.25
RNU6-48P-201ENST00000384161 PDE4AP27815 886 aa7.25□□□□□ -1.25
RNU6-48P-201ENST00000384161 EMILIN3Q9NT22 766 aa7.24□□□□□ -1.25
RNU6-48P-201ENST00000384161 MFSD10Q14728 455 aa7.22□□□□□ -1.25
RNU6-48P-201ENST00000384161 NRG2O14511 850 aaPredicted RBP7.21□□□□□ -1.26
RNU6-48P-201ENST00000384161 PHF14O94880 888 aa7.21□□□□□ -1.26
RNU6-48P-201ENST00000384161 TYW1BQ6NUM6 668 aa7.21□□□□□ -1.26
RNU6-48P-201ENST00000384161 BBXQ8WY36 941 aaPredicted RBP7.21□□□□□ -1.26
RNU6-48P-201ENST00000384161 FBXW7Q969H0 707 aa7.21□□□□□ -1.26
RNU6-48P-201ENST00000384161 CHGAP10645 457 aaKnown RBP7.2□□□□□ -1.26
RNU6-48P-201ENST00000384161 MAP3K9P80192 1104 aa7.2□□□□□ -1.26
RNU6-48P-201ENST00000384161 SEPT9Q9UHD8 586 aaPredicted RBP7.2□□□□□ -1.26
RNU6-48P-201ENST00000384161 TSR3Q9UJK0 312 aaKnown RBP7.2□□□□□ -1.26
RNU6-48P-201ENST00000384161 FAM98CQ17RN3 349 aaKnown RBP7.19□□□□□ -1.26
RNU6-48P-201ENST00000384161 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
RNU6-48P-201ENST00000384161 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.19□□□□□ -1.26
RNU6-48P-201ENST00000384161 TRIM6-TRIM34B2RNG4 842 aa7.18□□□□□ -1.26
RNU6-48P-201ENST00000384161 C6orf132Q5T0Z8 1188 aa7.18□□□□□ -1.26
RNU6-48P-201ENST00000384161 DDX27Q96GQ7 796 aaKnown RBP7.18□□□□□ -1.26
RNU6-48P-201ENST00000384161 LARP6Q9BRS8 491 aaKnown RBP7.17□□□□□ -1.26
RNU6-48P-201ENST00000384161 PRKD2Q9BZL6 878 aa7.17□□□□□ -1.26
RNU6-48P-201ENST00000384161 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.17□□□□□ -1.26
RNU6-48P-201ENST00000384161 HPS5Q9UPZ3 1129 aa7.17□□□□□ -1.26
RNU6-48P-201ENST00000384161 RYDENQ9NUL5 291 aaKnown RBP7.16□□□□□ -1.26
RNU6-48P-201ENST00000384161 V9GY48 417 aaPredicted RBP7.16□□□□□ -1.26
RNU6-48P-201ENST00000384161 ZNF775Q96BV0 537 aaPredicted RBP7.15□□□□□ -1.26
RNU6-48P-201ENST00000384161 LRCH3Q96II8 777 aa7.14□□□□□ -1.27
RNU6-48P-201ENST00000384161 ZNF787Q6DD87 383 aa7.13□□□□□ -1.27
RNU6-48P-201ENST00000384161 PPP1R18Q6NYC8 613 aa7.13□□□□□ -1.27
RNU6-48P-201ENST00000384161 EPAS1Q99814 870 aa7.13□□□□□ -1.27
RNU6-48P-201ENST00000384161 GTPBP6O43824 516 aaPredicted RBP7.12□□□□□ -1.27
RNU6-48P-201ENST00000384161 PLCB2Q00722 1185 aa7.11□□□□□ -1.27
RNU6-48P-201ENST00000384161 TSKSQ9UJT2 592 aa7.11□□□□□ -1.27
RNU6-48P-201ENST00000384161 SPRYD3Q8NCJ5 442 aa7.1□□□□□ -1.27
RNU6-48P-201ENST00000384161 PPP4CP60510 307 aa7.09□□□□□ -1.27
RNU6-48P-201ENST00000384161 CAMK2BQ13554 666 aa7.09□□□□□ -1.27
RNU6-48P-201ENST00000384161 MTRQ99707 1265 aa7.09□□□□□ -1.27
RNU6-48P-201ENST00000384161 ZNF516Q92618 1163 aa7.08□□□□□ -1.28
RNU6-48P-201ENST00000384161 IL21Q9HBE4 155 aa7.08□□□□□ -1.28
RNU6-48P-201ENST00000384161 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.08□□□□□ -1.28
RNU6-48P-201ENST00000384161 FAM198AQ9UFP1 575 aa7.07□□□□□ -1.28
RNU6-48P-201ENST00000384161 PDZRN3Q9UPQ7 1066 aa7.07□□□□□ -1.28
RNU6-48P-201ENST00000384161 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
RNU6-48P-201ENST00000384161 SLC24A1O60721 1099 aa7.06□□□□□ -1.28
RNU6-48P-201ENST00000384161 PAXIP1Q6ZW49 1069 aaPredicted RBP7.06□□□□□ -1.28
RNU6-48P-201ENST00000384161 CADPS2Q86UW7 1296 aa7.06□□□□□ -1.28
RNU6-48P-201ENST00000384161 TRIM67Q6ZTA4 783 aa7.05□□□□□ -1.28
RNU6-48P-201ENST00000384161 SAMD7Q7Z3H4 446 aa7.05□□□□□ -1.28
RNU6-48P-201ENST00000384161 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
RNU6-48P-201ENST00000384161 PACS2Q86VP3 889 aa7.04□□□□□ -1.28
RNU6-48P-201ENST00000384161 NKX2-3Q8TAU0 364 aa7.04□□□□□ -1.28
RNU6-48P-201ENST00000384161 RBM33Q96EV2 1170 aaKnown RBP7.04□□□□□ -1.28
RNU6-48P-201ENST00000384161 CFAP44Q96MT7 982 aa7.04□□□□□ -1.28
RNU6-48P-201ENST00000384161 EN1Q05925 392 aaPredicted RBP7.03□□□□□ -1.28
RNU6-48P-201ENST00000384161 TSR1Q2NL82 804 aaKnown RBP7.03□□□□□ -1.28
RNU6-48P-201ENST00000384161 SMAPO00193 183 aa7.02□□□□□ -1.29
RNU6-48P-201ENST00000384161 DPYSL4O14531 572 aa7.02□□□□□ -1.29
RNU6-48P-201ENST00000384161 POTECB2RU33 542 aa7.01□□□□□ -1.29
RNU6-48P-201ENST00000384161 APLP1P51693 650 aa7.01□□□□□ -1.29
RNU6-48P-201ENST00000384161 DDX12PQ92771 950 aa7.01□□□□□ -1.29
RNU6-48P-201ENST00000384161 EMID1Q96A84 441 aaPredicted RBP7.01□□□□□ -1.29
RNU6-48P-201ENST00000384161 CDCA7LQ96GN5 454 aa7□□□□□ -1.29
RNU6-48P-201ENST00000384161 PRSS12P56730 875 aa6.99□□□□□ -1.29
RNU6-48P-201ENST00000384161 MYT1Q01538 1121 aa6.99□□□□□ -1.29
RNU6-48P-201ENST00000384161 PRIM1P49642 420 aaKnown RBP6.98□□□□□ -1.29
RNU6-48P-201ENST00000384161 HAP1P54257 671 aaPredicted RBP6.98□□□□□ -1.29
RNU6-48P-201ENST00000384161 TATDN2Q93075 761 aa6.98□□□□□ -1.29
RNU6-48P-201ENST00000384161 TMUB1Q9BVT8 246 aa6.98□□□□□ -1.29
RNU6-48P-201ENST00000384161 MAP3K7O43318 606 aa6.95□□□□□ -1.3
RNU6-48P-201ENST00000384161 NBR1Q14596 966 aa6.95□□□□□ -1.3
RNU6-48P-201ENST00000384161 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
RNU6-48P-201ENST00000384161 DGAT1O75907 488 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PRR20EP86478 221 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PRR20CP86479 221 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PRR20DP86480 221 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PRR20BP86481 221 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PRR20AP86496 221 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PDIA6Q15084 440 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 CERKQ8TCT0 537 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 PNMA3Q9UL41 463 aa6.94□□□□□ -1.3
RNU6-48P-201ENST00000384161 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
RNU6-48P-201ENST00000384161 ZPR1O75312 459 aa6.92□□□□□ -1.3
RNU6-48P-201ENST00000384161 GGCXP38435 758 aa6.92□□□□□ -1.3
RNU6-48P-201ENST00000384161 SPRYD7Q5W111 196 aa6.92□□□□□ -1.3
RNU6-48P-201ENST00000384161 NBPF26B4DH59 902 aa6.91□□□□□ -1.3
RNU6-48P-201ENST00000384161 RNF223E7ERA6 249 aa6.91□□□□□ -1.3
RNU6-48P-201ENST00000384161 SLC19A1P41440 591 aa6.91□□□□□ -1.3
RNU6-48P-201ENST00000384161 COPS2P61201 443 aa6.91□□□□□ -1.3
RNU6-48P-201ENST00000384161 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
RNU6-48P-201ENST00000384161 TTC13Q8NBP0 860 aa6.91□□□□□ -1.3
RNU6-48P-201ENST00000384161 ZNF598Q86UK7 904 aaKnown RBP6.9□□□□□ -1.3
RNU6-48P-201ENST00000384161 TSHZ2Q9NRE2 1034 aa6.9□□□□□ -1.3
RNU6-48P-201ENST00000384161 RBM27Q9P2N5 1060 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms