RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
ABCA3-202ENST00000382381 HDGFL2Q7Z4V5 671 aaPredicted RBP16.21■□□□□ 0.19
ABCA3-202ENST00000382381 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
ABCA3-202ENST00000382381 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
ABCA3-202ENST00000382381 MPHOSPH9Q99550 1183 aa16.21■□□□□ 0.19
ABCA3-202ENST00000382381 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
ABCA3-202ENST00000382381 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
ABCA3-202ENST00000382381 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
ABCA3-202ENST00000382381 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
ABCA3-202ENST00000382381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.18■□□□□ 0.18
ABCA3-202ENST00000382381 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
ABCA3-202ENST00000382381 CCDC18Q5T9S5 1454 aa16.18■□□□□ 0.18
ABCA3-202ENST00000382381 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
ABCA3-202ENST00000382381 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
ABCA3-202ENST00000382381 G3V3G9 751 aa16.16■□□□□ 0.18
ABCA3-202ENST00000382381 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
ABCA3-202ENST00000382381 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
ABCA3-202ENST00000382381 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
ABCA3-202ENST00000382381 GBP4Q96PP9 640 aa16.16■□□□□ 0.18
ABCA3-202ENST00000382381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
ABCA3-202ENST00000382381 A0A0U1RQG5 324 aaPredicted RBP16.16■□□□□ 0.18
ABCA3-202ENST00000382381 SLC4A3P48751 1232 aa16.16■□□□□ 0.18
ABCA3-202ENST00000382381 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
ABCA3-202ENST00000382381 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
ABCA3-202ENST00000382381 RWDD1Q9H446 243 aaPredicted RBP16.14■□□□□ 0.17
ABCA3-202ENST00000382381 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
ABCA3-202ENST00000382381 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
ABCA3-202ENST00000382381 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
ABCA3-202ENST00000382381 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
ABCA3-202ENST00000382381 NGEFQ8N5V2 710 aa16.13■□□□□ 0.17
ABCA3-202ENST00000382381 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
ABCA3-202ENST00000382381 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
ABCA3-202ENST00000382381 TMX4Q9H1E5 349 aaPredicted RBP16.12■□□□□ 0.17
ABCA3-202ENST00000382381 RAD21O60216 631 aa16.1■□□□□ 0.17
ABCA3-202ENST00000382381 IGF1RP08069 1367 aa16.1■□□□□ 0.17
ABCA3-202ENST00000382381 MARCH6O60337 910 aa16.08■□□□□ 0.17
ABCA3-202ENST00000382381 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.17
ABCA3-202ENST00000382381 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
ABCA3-202ENST00000382381 PLIN1O60240 522 aa16.08■□□□□ 0.16
ABCA3-202ENST00000382381 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
ABCA3-202ENST00000382381 AMPHP49418 695 aa16.07■□□□□ 0.16
ABCA3-202ENST00000382381 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
ABCA3-202ENST00000382381 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
ABCA3-202ENST00000382381 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
ABCA3-202ENST00000382381 CALD1Q05682 793 aaKnown RBP16.07■□□□□ 0.16
ABCA3-202ENST00000382381 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
ABCA3-202ENST00000382381 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
ABCA3-202ENST00000382381 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
ABCA3-202ENST00000382381 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
ABCA3-202ENST00000382381 MSH5O43196 834 aa16.05■□□□□ 0.16
ABCA3-202ENST00000382381 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
ABCA3-202ENST00000382381 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
ABCA3-202ENST00000382381 MEX3CQ5U5Q3 659 aaKnown RBP16.05■□□□□ 0.16
ABCA3-202ENST00000382381 BCL11BQ9C0K0 894 aaPredicted RBP16.04■□□□□ 0.16
ABCA3-202ENST00000382381 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
ABCA3-202ENST00000382381 TPM4P67936 248 aa16.03■□□□□ 0.16
ABCA3-202ENST00000382381 PATL2C9JE40 543 aaKnown RBP16.03■□□□□ 0.16
ABCA3-202ENST00000382381 HTATSF1O43719 755 aaKnown RBP16.03■□□□□ 0.16
ABCA3-202ENST00000382381 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
ABCA3-202ENST00000382381 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
ABCA3-202ENST00000382381 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
ABCA3-202ENST00000382381 PMFBP1Q8TBY8 1022 aa16■□□□□ 0.15
ABCA3-202ENST00000382381 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
ABCA3-202ENST00000382381 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
ABCA3-202ENST00000382381 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
ABCA3-202ENST00000382381 HMMRO75330 724 aa15.99■□□□□ 0.15
ABCA3-202ENST00000382381 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
ABCA3-202ENST00000382381 MINK1Q8N4C8 1332 aaPredicted RBP15.99■□□□□ 0.15
ABCA3-202ENST00000382381 ANKRD45Q5TZF3 282 aa15.99■□□□□ 0.15
ABCA3-202ENST00000382381 CEP89Q96ST8 783 aa15.99■□□□□ 0.15
ABCA3-202ENST00000382381 EVA1CP58658 441 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 MCTP1Q6DN14 999 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 L3MBTL2Q969R5 705 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 EIF2S2P20042 333 aaKnown RBP15.98■□□□□ 0.15
ABCA3-202ENST00000382381 GOLGA6L1Q8N7Z2 621 aa15.98■□□□□ 0.15
ABCA3-202ENST00000382381 H3BQV1 296 aa15.97■□□□□ 0.15
ABCA3-202ENST00000382381 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
ABCA3-202ENST00000382381 TPD52L1Q16890 204 aaPredicted RBP15.97■□□□□ 0.15
ABCA3-202ENST00000382381 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
ABCA3-202ENST00000382381 IPO9Q96P70 1041 aaKnown RBP15.96■□□□□ 0.15
ABCA3-202ENST00000382381 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
ABCA3-202ENST00000382381 FOSBP53539 338 aa15.96■□□□□ 0.15
ABCA3-202ENST00000382381 TPM3P06753 285 aa15.95■□□□□ 0.14
ABCA3-202ENST00000382381 SYTL4Q96C24 671 aaPredicted RBP15.95■□□□□ 0.14
ABCA3-202ENST00000382381 ZNF592Q92610 1267 aa15.95■□□□□ 0.14
ABCA3-202ENST00000382381 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
ABCA3-202ENST00000382381 RALBP1Q15311 655 aa15.94■□□□□ 0.14
ABCA3-202ENST00000382381 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
ABCA3-202ENST00000382381 FAM184AQ8NB25 1140 aa15.93■□□□□ 0.14
ABCA3-202ENST00000382381 CCDC34Q96HJ3 373 aa15.93■□□□□ 0.14
ABCA3-202ENST00000382381 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
ABCA3-202ENST00000382381 ST18O60284 1047 aa15.92■□□□□ 0.14
ABCA3-202ENST00000382381 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
ABCA3-202ENST00000382381 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
ABCA3-202ENST00000382381 VGFO15240 615 aaPredicted RBP15.92■□□□□ 0.14
ABCA3-202ENST00000382381 DDX49Q9Y6V7 483 aaKnown RBP15.92■□□□□ 0.14
ABCA3-202ENST00000382381 CFTRP13569 1480 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms