RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 NBR1Q14596 966 aa7.22□□□□□ -1.25
SMC6-202ENST00000381272 GRXCR2A6NFK2 248 aa7.22□□□□□ -1.25
SMC6-202ENST00000381272 TK2O00142 265 aa7.22□□□□□ -1.25
SMC6-202ENST00000381272 ADGRD1Q6QNK2 874 aa7.22□□□□□ -1.25
SMC6-202ENST00000381272 MMRN1Q13201 1228 aa7.21□□□□□ -1.26
SMC6-202ENST00000381272 RBM33Q96EV2 1170 aaKnown RBP7.2□□□□□ -1.26
SMC6-202ENST00000381272 EN1Q05925 392 aaPredicted RBP7.2□□□□□ -1.26
SMC6-202ENST00000381272 C6orf132Q5T0Z8 1188 aa7.2□□□□□ -1.26
SMC6-202ENST00000381272 PPP1R3GB7ZBB8 358 aa7.19□□□□□ -1.26
SMC6-202ENST00000381272 MAP3K7O43318 606 aa7.19□□□□□ -1.26
SMC6-202ENST00000381272 SLC4A5Q9BY07 1137 aa7.19□□□□□ -1.26
SMC6-202ENST00000381272 MYT1LQ9UL68 1186 aa7.18□□□□□ -1.26
SMC6-202ENST00000381272 ZBED2Q9BTP6 218 aa7.17□□□□□ -1.26
SMC6-202ENST00000381272 VPS9D1Q9Y2B5 631 aa7.17□□□□□ -1.26
SMC6-202ENST00000381272 COL9A1P20849 921 aa7.17□□□□□ -1.26
SMC6-202ENST00000381272 OSBPP22059 807 aa7.17□□□□□ -1.26
SMC6-202ENST00000381272 STAC3Q96MF2 364 aa7.17□□□□□ -1.26
SMC6-202ENST00000381272 HRO43593 1189 aa7.16□□□□□ -1.26
SMC6-202ENST00000381272 SEMA3EO15041 775 aa7.15□□□□□ -1.27
SMC6-202ENST00000381272 MLLT3P42568 568 aaPredicted RBP7.15□□□□□ -1.27
SMC6-202ENST00000381272 TSR1Q2NL82 804 aaKnown RBP7.15□□□□□ -1.27
SMC6-202ENST00000381272 RNF166Q96A37 237 aaPredicted RBP7.15□□□□□ -1.27
SMC6-202ENST00000381272 PRIM1P49642 420 aaKnown RBP7.14□□□□□ -1.27
SMC6-202ENST00000381272 PROX2Q3B8N5 592 aa7.13□□□□□ -1.27
SMC6-202ENST00000381272 CERKQ8TCT0 537 aa7.13□□□□□ -1.27
SMC6-202ENST00000381272 NBPF3Q9H094 633 aa7.12□□□□□ -1.27
SMC6-202ENST00000381272 RABGEF1Q9UJ41 708 aa7.12□□□□□ -1.27
SMC6-202ENST00000381272 BHMG1C9JSJ3 638 aaPredicted RBP7.11□□□□□ -1.27
SMC6-202ENST00000381272 ONECUT3O60422 494 aaPredicted RBP7.11□□□□□ -1.27
SMC6-202ENST00000381272 SMYD5Q6GMV2 418 aa7.11□□□□□ -1.27
SMC6-202ENST00000381272 MRPL50Q8N5N7 158 aaKnown RBP7.11□□□□□ -1.27
SMC6-202ENST00000381272 TESPA1A2RU30 521 aaPredicted RBP7.1□□□□□ -1.27
SMC6-202ENST00000381272 TRIM6-TRIM34B2RNG4 842 aa7.1□□□□□ -1.27
SMC6-202ENST00000381272 CDHR5Q9HBB8 845 aa7.09□□□□□ -1.27
SMC6-202ENST00000381272 KIAA1468Q9P260 1216 aa7.09□□□□□ -1.27
SMC6-202ENST00000381272 GOLGA8CPA6NN73 597 aa7.08□□□□□ -1.28
SMC6-202ENST00000381272 PRSS12P56730 875 aa7.08□□□□□ -1.28
SMC6-202ENST00000381272 CDCA7LQ96GN5 454 aa7.08□□□□□ -1.28
SMC6-202ENST00000381272 PACS2Q86VP3 889 aa7.08□□□□□ -1.28
SMC6-202ENST00000381272 TSKSQ9UJT2 592 aa7.07□□□□□ -1.28
SMC6-202ENST00000381272 NUTM2FA1L443 756 aa7.06□□□□□ -1.28
SMC6-202ENST00000381272 KCTD12Q96CX2 325 aaKnown RBP7.06□□□□□ -1.28
SMC6-202ENST00000381272 NPDC1Q9NQX5 325 aaPredicted RBP7.06□□□□□ -1.28
SMC6-202ENST00000381272 RBM27Q9P2N5 1060 aaKnown RBP7.06□□□□□ -1.28
SMC6-202ENST00000381272 LAPTM4BQ86VI4 370 aa7.06□□□□□ -1.28
SMC6-202ENST00000381272 PTGDRQ13258 359 aa7.04□□□□□ -1.28
SMC6-202ENST00000381272 WNT2BQ93097 391 aa7.04□□□□□ -1.28
SMC6-202ENST00000381272 TULP1O00294 542 aaPredicted RBP7.04□□□□□ -1.28
SMC6-202ENST00000381272 HCSTQ9UBK5 93 aa7.04□□□□□ -1.28
SMC6-202ENST00000381272 SEPT9Q9UHD8 586 aaPredicted RBP7.04□□□□□ -1.28
SMC6-202ENST00000381272 NBPF26B4DH59 902 aa7.03□□□□□ -1.28
SMC6-202ENST00000381272 FAM98CQ17RN3 349 aaKnown RBP7.03□□□□□ -1.28
SMC6-202ENST00000381272 RBM26Q5T8P6 1007 aaKnown RBP7.03□□□□□ -1.28
SMC6-202ENST00000381272 FAM198AQ9UFP1 575 aa7.03□□□□□ -1.28
SMC6-202ENST00000381272 FCHSD2O94868 740 aa7.02□□□□□ -1.29
SMC6-202ENST00000381272 PADI6Q6TGC4 694 aa7.02□□□□□ -1.29
SMC6-202ENST00000381272 ANKK1Q8NFD2 765 aa7.02□□□□□ -1.29
SMC6-202ENST00000381272 ZFRQ96KR1 1074 aaKnown RBP7.02□□□□□ -1.29
SMC6-202ENST00000381272 TATDN2Q93075 761 aa7.01□□□□□ -1.29
SMC6-202ENST00000381272 THSD4Q6ZMP0 1018 aa7.01□□□□□ -1.29
SMC6-202ENST00000381272 TTC13Q8NBP0 860 aa7.01□□□□□ -1.29
SMC6-202ENST00000381272 PNMA3Q9UL41 463 aa7.01□□□□□ -1.29
SMC6-202ENST00000381272 NUDT18Q6ZVK8 323 aa7□□□□□ -1.29
SMC6-202ENST00000381272 SMAPO00193 183 aa6.99□□□□□ -1.29
SMC6-202ENST00000381272 PTPN5P54829 565 aa6.99□□□□□ -1.29
SMC6-202ENST00000381272 SLC24A1O60721 1099 aa6.99□□□□□ -1.29
SMC6-202ENST00000381272 HIC1Q14526 733 aa6.99□□□□□ -1.29
SMC6-202ENST00000381272 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
SMC6-202ENST00000381272 SOWAHBA6NEL2 793 aa6.97□□□□□ -1.29
SMC6-202ENST00000381272 GPIHBP1Q8IV16 184 aa6.97□□□□□ -1.29
SMC6-202ENST00000381272 LRCH3Q96II8 777 aa6.97□□□□□ -1.29
SMC6-202ENST00000381272 BCAMP50895 628 aa6.97□□□□□ -1.29
SMC6-202ENST00000381272 HDGFP51858 240 aaKnown RBP6.97□□□□□ -1.29
SMC6-202ENST00000381272 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.97□□□□□ -1.29
SMC6-202ENST00000381272 GNPATO15228 680 aa6.95□□□□□ -1.3
SMC6-202ENST00000381272 EYA1Q99502 592 aa6.95□□□□□ -1.3
SMC6-202ENST00000381272 SAMD7Q7Z3H4 446 aa6.94□□□□□ -1.3
SMC6-202ENST00000381272 RBM46Q8TBY0 533 aaKnown RBP6.94□□□□□ -1.3
SMC6-202ENST00000381272 ADGRG1Q9Y653 693 aa6.94□□□□□ -1.3
SMC6-202ENST00000381272 GPR37O15354 613 aa6.94□□□□□ -1.3
SMC6-202ENST00000381272 TSR3Q9UJK0 312 aaKnown RBP6.93□□□□□ -1.3
SMC6-202ENST00000381272 OATP04181 439 aa6.92□□□□□ -1.3
SMC6-202ENST00000381272 FAM161AQ3B820 660 aa6.92□□□□□ -1.3
SMC6-202ENST00000381272 NYAP1Q6ZVC0 841 aa6.92□□□□□ -1.3
SMC6-202ENST00000381272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMC6-202ENST00000381272 HPS5Q9UPZ3 1129 aa6.92□□□□□ -1.3
SMC6-202ENST00000381272 FECHP22830 423 aa6.92□□□□□ -1.3
SMC6-202ENST00000381272 WBP1LQ9NX94 342 aa6.92□□□□□ -1.3
SMC6-202ENST00000381272 DNAJB2P25686 324 aa6.91□□□□□ -1.3
SMC6-202ENST00000381272 SLC4A3P48751 1232 aa6.91□□□□□ -1.3
SMC6-202ENST00000381272 PPP4CP60510 307 aa6.91□□□□□ -1.3
SMC6-202ENST00000381272 RNF40O75150 1001 aa6.9□□□□□ -1.3
SMC6-202ENST00000381272 SWT1Q5T5J6 900 aaKnown RBP6.9□□□□□ -1.3
SMC6-202ENST00000381272 LMOD2Q6P5Q4 547 aa6.9□□□□□ -1.3
SMC6-202ENST00000381272 PXYLP1Q8TE99 480 aa6.9□□□□□ -1.31
SMC6-202ENST00000381272 PLA2G2EQ9NZK7 142 aa6.9□□□□□ -1.31
SMC6-202ENST00000381272 RCCD1A6NED2 376 aa6.89□□□□□ -1.31
SMC6-202ENST00000381272 METTL3Q86U44 580 aaKnown RBP6.89□□□□□ -1.31
SMC6-202ENST00000381272 SLF2Q8IX21 1173 aa6.89□□□□□ -1.31
SMC6-202ENST00000381272 NECTIN2Q92692 538 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms