RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
POLR2J3-201ENST00000379340 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
POLR2J3-201ENST00000379340 PLXNC1O60486 1568 aa14.84□□□□□ -0.03
POLR2J3-201ENST00000379340 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.03
POLR2J3-201ENST00000379340 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.03
POLR2J3-201ENST00000379340 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.04
POLR2J3-201ENST00000379340 SYCP2Q9BX26 1530 aa14.83□□□□□ -0.04
POLR2J3-201ENST00000379340 KIF15Q9NS87 1388 aa14.83□□□□□ -0.04
POLR2J3-201ENST00000379340 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
POLR2J3-201ENST00000379340 PLCH2O75038 1416 aa14.81□□□□□ -0.04
POLR2J3-201ENST00000379340 STRCQ7RTU9 1775 aa14.81□□□□□ -0.04
POLR2J3-201ENST00000379340 HNRNPMP52272 730 aaKnown RBP eCLIP14.8□□□□□ -0.04
POLR2J3-201ENST00000379340 ARHGEF12Q9NZN5 1544 aa14.8□□□□□ -0.04
POLR2J3-201ENST00000379340 L3MBTL2Q969R5 705 aa14.79□□□□□ -0.04
POLR2J3-201ENST00000379340 UNC13BO14795 1591 aa14.78□□□□□ -0.04
POLR2J3-201ENST00000379340 SPATA31D1Q6ZQQ2 1576 aa14.78□□□□□ -0.04
POLR2J3-201ENST00000379340 CFAP74Q9C0B2 1584 aa14.78□□□□□ -0.04
POLR2J3-201ENST00000379340 PREX1Q8TCU6 1659 aa14.78□□□□□ -0.04
POLR2J3-201ENST00000379340 FOXD1Q16676 465 aa14.77□□□□□ -0.04
POLR2J3-201ENST00000379340 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.04
POLR2J3-201ENST00000379340 NUP155O75694 1391 aa14.77□□□□□ -0.04
POLR2J3-201ENST00000379340 ABCC1P33527 1531 aa14.77□□□□□ -0.05
POLR2J3-201ENST00000379340 MAGI2Q86UL8 1455 aa14.76□□□□□ -0.05
POLR2J3-201ENST00000379340 SCAPERQ9BY12 1400 aa14.76□□□□□ -0.05
POLR2J3-201ENST00000379340 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
POLR2J3-201ENST00000379340 EFCAB2Q5VUJ9 269 aa14.76□□□□□ -0.05
POLR2J3-201ENST00000379340 DUOX2Q9NRD8 1548 aa14.75□□□□□ -0.05
POLR2J3-201ENST00000379340 EIF4G2P78344 907 aaKnown RBP eCLIP14.75□□□□□ -0.05
POLR2J3-201ENST00000379340 PKD2Q13563 968 aa14.75□□□□□ -0.05
POLR2J3-201ENST00000379340 ATP10AO60312 1499 aa14.74□□□□□ -0.05
POLR2J3-201ENST00000379340 FAM135AQ9P2D6 1515 aa14.73□□□□□ -0.05
POLR2J3-201ENST00000379340 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
POLR2J3-201ENST00000379340 POLR1AO95602 1720 aaPredicted RBP14.73□□□□□ -0.05
POLR2J3-201ENST00000379340 IQGAP3Q86VI3 1631 aa14.72□□□□□ -0.05
POLR2J3-201ENST00000379340 CCER2I3L3R5 266 aa14.71□□□□□ -0.05
POLR2J3-201ENST00000379340 HSPA5P11021 654 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-201ENST00000379340 RTEL1-TNFRSF6BF6WH68 1400 aa14.7□□□□□ -0.06
POLR2J3-201ENST00000379340 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
POLR2J3-201ENST00000379340 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
POLR2J3-201ENST00000379340 ANP32CO43423 234 aa14.69□□□□□ -0.06
POLR2J3-201ENST00000379340 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
POLR2J3-201ENST00000379340 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
POLR2J3-201ENST00000379340 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
POLR2J3-201ENST00000379340 NBPF8Q3BBV2 869 aa14.67□□□□□ -0.06
POLR2J3-201ENST00000379340 PTPRTO14522 1441 aa14.67□□□□□ -0.06
POLR2J3-201ENST00000379340 AFAP1Q8N556 730 aa14.66□□□□□ -0.06
POLR2J3-201ENST00000379340 SPATA31E1Q6ZUB1 1445 aa14.66□□□□□ -0.06
POLR2J3-201ENST00000379340 RALGAPBQ86X10 1494 aa14.65□□□□□ -0.06
POLR2J3-201ENST00000379340 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
POLR2J3-201ENST00000379340 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
POLR2J3-201ENST00000379340 C3P01024 1663 aa14.63□□□□□ -0.07
POLR2J3-201ENST00000379340 INO80Q9ULG1 1556 aaPredicted RBP14.63□□□□□ -0.07
POLR2J3-201ENST00000379340 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
POLR2J3-201ENST00000379340 SETD1BQ9UPS6 1966 aaKnown RBP14.63□□□□□ -0.07
POLR2J3-201ENST00000379340 DIP2CQ9Y2E4 1556 aa14.63□□□□□ -0.07
POLR2J3-201ENST00000379340 CNTLNQ9NXG0 1405 aa14.62□□□□□ -0.07
POLR2J3-201ENST00000379340 CCDC144AA2RUR9 1427 aa14.62□□□□□ -0.07
POLR2J3-201ENST00000379340 CCDC7Q96M83 1385 aa14.62□□□□□ -0.07
POLR2J3-201ENST00000379340 KDM5CP41229 1560 aa14.61□□□□□ -0.07
POLR2J3-201ENST00000379340 DEPDC5O75140 1603 aa14.61□□□□□ -0.07
POLR2J3-201ENST00000379340 SPAG9O60271 1321 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-201ENST00000379340 EIF2AK4Q9P2K8 1649 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-201ENST00000379340 ATP7AQ04656 1500 aa14.6□□□□□ -0.07
POLR2J3-201ENST00000379340 ABCA6Q8N139 1617 aa14.6□□□□□ -0.07
POLR2J3-201ENST00000379340 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
POLR2J3-201ENST00000379340 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
POLR2J3-201ENST00000379340 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
POLR2J3-201ENST00000379340 USP47Q96K76 1375 aa14.57□□□□□ -0.08
POLR2J3-201ENST00000379340 REREQ9P2R6 1566 aa14.56□□□□□ -0.08
POLR2J3-201ENST00000379340 ZNF335Q9H4Z2 1342 aaPredicted RBP14.56□□□□□ -0.08
POLR2J3-201ENST00000379340 LAMC1P11047 1609 aa14.56□□□□□ -0.08
POLR2J3-201ENST00000379340 PLA2R1Q13018 1463 aa14.56□□□□□ -0.08
POLR2J3-201ENST00000379340 NCKAP5LQ9HCH0 1330 aa14.55□□□□□ -0.08
POLR2J3-201ENST00000379340 TET3O43151 1660 aa14.55□□□□□ -0.08
POLR2J3-201ENST00000379340 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
POLR2J3-201ENST00000379340 UBAP1LF5GYI3 381 aa14.54□□□□□ -0.08
POLR2J3-201ENST00000379340 CAMSAP1Q5T5Y3 1602 aa14.54□□□□□ -0.08
POLR2J3-201ENST00000379340 VWDEQ8N2E2 1590 aa14.54□□□□□ -0.08
POLR2J3-201ENST00000379340 MLH3Q9UHC1 1453 aa14.53□□□□□ -0.08
POLR2J3-201ENST00000379340 AGLP35573 1532 aa14.53□□□□□ -0.08
POLR2J3-201ENST00000379340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
POLR2J3-201ENST00000379340 KIF7Q2M1P5 1343 aa14.53□□□□□ -0.08
POLR2J3-201ENST00000379340 E9PCH4 1651 aa14.52□□□□□ -0.08
POLR2J3-201ENST00000379340 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.08
POLR2J3-201ENST00000379340 TRPM2O94759 1503 aa14.52□□□□□ -0.09
POLR2J3-201ENST00000379340 PRDM15P57071 1507 aaPredicted RBP14.52□□□□□ -0.09
POLR2J3-201ENST00000379340 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.09
POLR2J3-201ENST00000379340 KANK1Q14678 1352 aa14.52□□□□□ -0.09
POLR2J3-201ENST00000379340 SPHKAPQ2M3C7 1700 aa14.52□□□□□ -0.09
POLR2J3-201ENST00000379340 ZNF326Q5BKZ1 582 aaKnown RBP14.51□□□□□ -0.09
POLR2J3-201ENST00000379340 DCAF11Q8TEB1 546 aa14.51□□□□□ -0.09
POLR2J3-201ENST00000379340 DHX29Q7Z478 1369 aaKnown RBP14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 A2MP01023 1474 aa14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 C11orf95C9JLR9 678 aaPredicted RBP14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 CARD11Q9BXL7 1154 aa14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 CEP152O94986 1710 aa14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 KIDINS220Q9ULH0 1771 aa14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 NEURL4Q96JN8 1562 aa14.5□□□□□ -0.09
POLR2J3-201ENST00000379340 ESF1Q9H501 851 aaKnown RBP14.49□□□□□ -0.09
POLR2J3-201ENST00000379340 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms