RNA–Protein interactions for RNA: ENST00000377973.4

CIR1-202, Transcript of corepressor interacting with RBPJ, 1, humanhuman

TSL 3

Gene CIR1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-202ENST00000377973 ATP10AO60312 1499 aa12.53□□□□□ -0.4
CIR1-202ENST00000377973 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
CIR1-202ENST00000377973 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
CIR1-202ENST00000377973 ANP32CO43423 234 aa12.52□□□□□ -0.41
CIR1-202ENST00000377973 ADGRL2O95490 1459 aa12.52□□□□□ -0.41
CIR1-202ENST00000377973 CAMSAP2Q08AD1 1489 aa12.52□□□□□ -0.41
CIR1-202ENST00000377973 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
CIR1-202ENST00000377973 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
CIR1-202ENST00000377973 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
CIR1-202ENST00000377973 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
CIR1-202ENST00000377973 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
CIR1-202ENST00000377973 MPHOSPH9Q99550 1183 aa12.51□□□□□ -0.41
CIR1-202ENST00000377973 CHIC2Q9UKJ5 165 aa12.51□□□□□ -0.41
CIR1-202ENST00000377973 ABCC5O15440 1437 aa12.51□□□□□ -0.41
CIR1-202ENST00000377973 SETD1BQ9UPS6 1966 aaKnown RBP12.5□□□□□ -0.41
CIR1-202ENST00000377973 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
CIR1-202ENST00000377973 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
CIR1-202ENST00000377973 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
CIR1-202ENST00000377973 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
CIR1-202ENST00000377973 CROCC2H7BZ55 1655 aa12.49□□□□□ -0.41
CIR1-202ENST00000377973 GPATCH8Q9UKJ3 1502 aaKnown RBP12.49□□□□□ -0.41
CIR1-202ENST00000377973 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
CIR1-202ENST00000377973 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
CIR1-202ENST00000377973 C3P01024 1663 aa12.48□□□□□ -0.41
CIR1-202ENST00000377973 DISP3Q9P2K9 1392 aa12.47□□□□□ -0.41
CIR1-202ENST00000377973 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
CIR1-202ENST00000377973 KDM5CP41229 1560 aa12.47□□□□□ -0.41
CIR1-202ENST00000377973 SOCS7O14512 581 aa12.46□□□□□ -0.41
CIR1-202ENST00000377973 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
CIR1-202ENST00000377973 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.42
CIR1-202ENST00000377973 DIP2CQ9Y2E4 1556 aa12.46□□□□□ -0.42
CIR1-202ENST00000377973 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
CIR1-202ENST00000377973 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
CIR1-202ENST00000377973 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
CIR1-202ENST00000377973 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
CIR1-202ENST00000377973 RPRD2Q5VT52 1461 aaKnown RBP12.44□□□□□ -0.42
CIR1-202ENST00000377973 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
CIR1-202ENST00000377973 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
CIR1-202ENST00000377973 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
CIR1-202ENST00000377973 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CIR1-202ENST00000377973 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
CIR1-202ENST00000377973 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
CIR1-202ENST00000377973 DDX10Q13206 875 aaKnown RBP12.42□□□□□ -0.42
CIR1-202ENST00000377973 PTPRTO14522 1441 aa12.42□□□□□ -0.42
CIR1-202ENST00000377973 ARHGAP5Q13017 1502 aa12.42□□□□□ -0.42
CIR1-202ENST00000377973 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
CIR1-202ENST00000377973 KIAA1107Q9UPP5 1409 aa12.41□□□□□ -0.42
CIR1-202ENST00000377973 ANKRD30BQ9BXX2 1392 aa12.41□□□□□ -0.42
CIR1-202ENST00000377973 KIDINS220Q9ULH0 1771 aa12.4□□□□□ -0.42
CIR1-202ENST00000377973 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.43
CIR1-202ENST00000377973 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.43
CIR1-202ENST00000377973 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
CIR1-202ENST00000377973 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
CIR1-202ENST00000377973 PREX2Q70Z35 1606 aa12.39□□□□□ -0.43
CIR1-202ENST00000377973 AGLP35573 1532 aa12.38□□□□□ -0.43
CIR1-202ENST00000377973 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
CIR1-202ENST00000377973 MYT1LQ9UL68 1186 aa12.37□□□□□ -0.43
CIR1-202ENST00000377973 ABCC1P33527 1531 aa12.37□□□□□ -0.43
CIR1-202ENST00000377973 MAST1Q9Y2H9 1570 aa12.35□□□□□ -0.43
CIR1-202ENST00000377973 ZNF644Q9H582 1327 aaPredicted RBP12.35□□□□□ -0.43
CIR1-202ENST00000377973 L3MBTL2Q969R5 705 aa12.34□□□□□ -0.43
CIR1-202ENST00000377973 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
CIR1-202ENST00000377973 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.43
CIR1-202ENST00000377973 NUP155O75694 1391 aa12.33□□□□□ -0.44
CIR1-202ENST00000377973 KIF15Q9NS87 1388 aa12.33□□□□□ -0.44
CIR1-202ENST00000377973 NEFLP07196 543 aa12.33□□□□□ -0.44
CIR1-202ENST00000377973 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
CIR1-202ENST00000377973 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
CIR1-202ENST00000377973 PZPP20742 1482 aa12.32□□□□□ -0.44
CIR1-202ENST00000377973 NCKAP5LQ9HCH0 1330 aa12.32□□□□□ -0.44
CIR1-202ENST00000377973 ROCK2O75116 1388 aaKnown RBP12.31□□□□□ -0.44
CIR1-202ENST00000377973 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
CIR1-202ENST00000377973 PKD2Q13563 968 aa12.31□□□□□ -0.44
CIR1-202ENST00000377973 PLXNC1O60486 1568 aa12.3□□□□□ -0.44
CIR1-202ENST00000377973 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
CIR1-202ENST00000377973 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
CIR1-202ENST00000377973 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
CIR1-202ENST00000377973 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
CIR1-202ENST00000377973 CNTLNQ9NXG0 1405 aa12.29□□□□□ -0.44
CIR1-202ENST00000377973 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
CIR1-202ENST00000377973 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
CIR1-202ENST00000377973 NPATQ14207 1427 aa12.28□□□□□ -0.44
CIR1-202ENST00000377973 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
CIR1-202ENST00000377973 DUOX2Q9NRD8 1548 aa12.28□□□□□ -0.44
CIR1-202ENST00000377973 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
CIR1-202ENST00000377973 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.45
CIR1-202ENST00000377973 ERBINQ96RT1 1412 aa12.27□□□□□ -0.45
CIR1-202ENST00000377973 MYO3AQ8NEV4 1616 aa12.26□□□□□ -0.45
CIR1-202ENST00000377973 HNRNPMP52272 730 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■■□ 25
CIR1-202ENST00000377973 SYCP2Q9BX26 1530 aa12.26□□□□□ -0.45
CIR1-202ENST00000377973 UBAP1LF5GYI3 381 aa12.25□□□□□ -0.45
CIR1-202ENST00000377973 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
CIR1-202ENST00000377973 UNC13BO14795 1591 aa12.25□□□□□ -0.45
CIR1-202ENST00000377973 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
CIR1-202ENST00000377973 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
CIR1-202ENST00000377973 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
CIR1-202ENST00000377973 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
CIR1-202ENST00000377973 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
CIR1-202ENST00000377973 KTN1Q86UP2 1357 aaKnown RBP12.23□□□□□ -0.45
CIR1-202ENST00000377973 SPAG9O60271 1321 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms