RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
PCDH8-202ENST00000377942 ARAP1Q96P48 1450 aa25■■□□□ 1.59
PCDH8-202ENST00000377942 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
PCDH8-202ENST00000377942 FGD1P98174 961 aa25■■□□□ 1.59
PCDH8-202ENST00000377942 ZRSR1Q15695 479 aaKnown RBP25■■□□□ 1.59
PCDH8-202ENST00000377942 ARHGAP5Q13017 1502 aa24.98■■□□□ 1.59
PCDH8-202ENST00000377942 MCCP23508 829 aa24.97■■□□□ 1.59
PCDH8-202ENST00000377942 COG3Q96JB2 828 aa24.96■■□□□ 1.59
PCDH8-202ENST00000377942 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
PCDH8-202ENST00000377942 PLEKHH2Q8IVE3 1493 aa24.95■■□□□ 1.58
PCDH8-202ENST00000377942 NUTM2FA1L443 756 aa24.94■■□□□ 1.58
PCDH8-202ENST00000377942 HSP90AB1P08238 724 aaKnown RBP24.94■■□□□ 1.58
PCDH8-202ENST00000377942 ITPRIPQ8IWB1 547 aa24.94■■□□□ 1.58
PCDH8-202ENST00000377942 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
PCDH8-202ENST00000377942 CDK11BP21127 795 aaKnown RBP24.93■■□□□ 1.58
PCDH8-202ENST00000377942 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
PCDH8-202ENST00000377942 SMC4Q9NTJ3 1288 aa24.93■■□□□ 1.58
PCDH8-202ENST00000377942 MIA2Q96PC5 1412 aa24.92■■□□□ 1.58
PCDH8-202ENST00000377942 MINK1Q8N4C8 1332 aaPredicted RBP24.91■■□□□ 1.58
PCDH8-202ENST00000377942 PMFBP1Q8TBY8 1022 aa24.91■■□□□ 1.58
PCDH8-202ENST00000377942 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
PCDH8-202ENST00000377942 PRKRIP1Q9H875 184 aaPredicted RBP24.91■■□□□ 1.58
PCDH8-202ENST00000377942 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
PCDH8-202ENST00000377942 CCDC146Q8IYE0 955 aa24.9■■□□□ 1.58
PCDH8-202ENST00000377942 CENPJQ9HC77 1338 aaPredicted RBP24.89■■□□□ 1.58
PCDH8-202ENST00000377942 AFAP1Q8N556 730 aa24.89■■□□□ 1.58
PCDH8-202ENST00000377942 HSCBQ8IWL3 235 aa24.88■■□□□ 1.57
PCDH8-202ENST00000377942 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
PCDH8-202ENST00000377942 HMMRO75330 724 aa24.87■■□□□ 1.57
PCDH8-202ENST00000377942 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
PCDH8-202ENST00000377942 CCDC9Q9Y3X0 531 aaKnown RBP24.87■■□□□ 1.57
PCDH8-202ENST00000377942 KIAA0586Q9BVV6 1533 aa24.87■■□□□ 1.57
PCDH8-202ENST00000377942 NGEFQ8N5V2 710 aa24.86■■□□□ 1.57
PCDH8-202ENST00000377942 TRIM44Q96DX7 344 aaPredicted RBP24.86■■□□□ 1.57
PCDH8-202ENST00000377942 LTV1Q96GA3 475 aaPredicted RBP24.85■■□□□ 1.57
PCDH8-202ENST00000377942 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
PCDH8-202ENST00000377942 ZNF330Q9Y3S2 320 aaPredicted RBP24.82■■□□□ 1.56
PCDH8-202ENST00000377942 KIAA1211Q6ZU35 1233 aa24.82■■□□□ 1.56
PCDH8-202ENST00000377942 TCERG1O14776 1098 aaKnown RBP24.82■■□□□ 1.56
PCDH8-202ENST00000377942 NOP58Q9Y2X3 529 aaKnown RBP24.81■■□□□ 1.56
PCDH8-202ENST00000377942 HFM1A2PYH4 1435 aa24.81■■□□□ 1.56
PCDH8-202ENST00000377942 APBB1O00213 710 aa24.79■■□□□ 1.56
PCDH8-202ENST00000377942 NAP1L2Q9ULW6 460 aaPredicted RBP24.79■■□□□ 1.56
PCDH8-202ENST00000377942 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
PCDH8-202ENST00000377942 E9PSI1 815 aa24.77■■□□□ 1.56
PCDH8-202ENST00000377942 GPATCH3Q96I76 525 aa24.75■■□□□ 1.55
PCDH8-202ENST00000377942 DIAPH1O60610 1272 aaKnown RBP24.74■■□□□ 1.55
PCDH8-202ENST00000377942 C1orf141Q5JVX7 400 aa24.74■■□□□ 1.55
PCDH8-202ENST00000377942 CCDC7Q96M83 1385 aa24.73■■□□□ 1.55
PCDH8-202ENST00000377942 PTMAP06454 111 aaKnown RBP24.72■■□□□ 1.55
PCDH8-202ENST00000377942 SLC4A10Q6U841 1118 aa24.72■■□□□ 1.55
PCDH8-202ENST00000377942 TIAM1Q13009 1591 aa24.71■■□□□ 1.55
PCDH8-202ENST00000377942 CLUAP1Q96AJ1 413 aa24.71■■□□□ 1.55
PCDH8-202ENST00000377942 RRP7AQ9Y3A4 280 aaKnown RBP24.71■■□□□ 1.55
PCDH8-202ENST00000377942 PSME1Q06323 249 aa24.71■■□□□ 1.55
PCDH8-202ENST00000377942 ZBED9Q6R2W3 1325 aa24.7■■□□□ 1.54
PCDH8-202ENST00000377942 TMX4Q9H1E5 349 aaPredicted RBP24.7■■□□□ 1.54
PCDH8-202ENST00000377942 GOLGA6L4A6NEF3 574 aa24.7■■□□□ 1.54
PCDH8-202ENST00000377942 TAF7LQ5H9L4 462 aa24.7■■□□□ 1.54
PCDH8-202ENST00000377942 PEG3Q9GZU2 1588 aa24.69■■□□□ 1.54
PCDH8-202ENST00000377942 GORABQ5T7V8 394 aa24.69■■□□□ 1.54
PCDH8-202ENST00000377942 TEFQ10587 303 aa24.69■■□□□ 1.54
PCDH8-202ENST00000377942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.68■■□□□ 1.54
PCDH8-202ENST00000377942 KIF7Q2M1P5 1343 aa24.68■■□□□ 1.54
PCDH8-202ENST00000377942 SCAPERQ9BY12 1400 aa24.67■■□□□ 1.54
PCDH8-202ENST00000377942 IQGAP2Q13576 1575 aa24.67■■□□□ 1.54
PCDH8-202ENST00000377942 EVA1CP58658 441 aa24.67■■□□□ 1.54
PCDH8-202ENST00000377942 CUL7Q14999 1698 aa24.66■■□□□ 1.54
PCDH8-202ENST00000377942 KIAA1107Q9UPP5 1409 aa24.66■■□□□ 1.54
PCDH8-202ENST00000377942 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
PCDH8-202ENST00000377942 CHMP3Q9Y3E7 222 aa24.66■■□□□ 1.54
PCDH8-202ENST00000377942 TPRNQ4KMQ1 711 aa24.65■■□□□ 1.54
PCDH8-202ENST00000377942 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
PCDH8-202ENST00000377942 APAF1O14727 1248 aa24.64■■□□□ 1.53
PCDH8-202ENST00000377942 ZKSCAN2Q63HK3 967 aa24.64■■□□□ 1.53
PCDH8-202ENST00000377942 EPRSP07814 1512 aaKnown RBP24.63■■□□□ 1.53
PCDH8-202ENST00000377942 SUPT6HQ7KZ85 1726 aaKnown RBP24.62■■□□□ 1.53
PCDH8-202ENST00000377942 ATF3P18847 181 aa24.62■■□□□ 1.53
PCDH8-202ENST00000377942 TAOK2Q9UL54 1235 aa24.62■■□□□ 1.53
PCDH8-202ENST00000377942 DAPK1P53355 1430 aa24.61■■□□□ 1.53
PCDH8-202ENST00000377942 CFAP70Q5T0N1 1121 aa24.6■■□□□ 1.53
PCDH8-202ENST00000377942 TMEM132EQ6IEE7 984 aa24.6■■□□□ 1.53
PCDH8-202ENST00000377942 RUNDC1Q96C34 613 aa24.6■■□□□ 1.53
PCDH8-202ENST00000377942 CNTLNQ9NXG0 1405 aa24.6■■□□□ 1.53
PCDH8-202ENST00000377942 TXNDC2Q86VQ3 553 aa24.59■■□□□ 1.53
PCDH8-202ENST00000377942 GOLGA6L6A8MZA4 724 aa24.58■■□□□ 1.53
PCDH8-202ENST00000377942 THEMISQ8N1K5 641 aaPredicted RBP24.58■■□□□ 1.52
PCDH8-202ENST00000377942 TTC5Q8N0Z6 440 aa24.57■■□□□ 1.52
PCDH8-202ENST00000377942 TRIM6-TRIM34B2RNG4 842 aa24.57■■□□□ 1.52
PCDH8-202ENST00000377942 RBM19Q9Y4C8 960 aaKnown RBP24.57■■□□□ 1.52
PCDH8-202ENST00000377942 ELL2O00472 640 aaPredicted RBP24.56■■□□□ 1.52
PCDH8-202ENST00000377942 RIPK4P57078 832 aa24.56■■□□□ 1.52
PCDH8-202ENST00000377942 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
PCDH8-202ENST00000377942 GTF2E1P29083 439 aaPredicted RBP24.56■■□□□ 1.52
PCDH8-202ENST00000377942 PTMSP20962 102 aa24.55■■□□□ 1.52
PCDH8-202ENST00000377942 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
PCDH8-202ENST00000377942 ROCK1Q13464 1354 aa24.55■■□□□ 1.52
PCDH8-202ENST00000377942 CABP2Q9NPB3 220 aa24.55■■□□□ 1.52
PCDH8-202ENST00000377942 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
PCDH8-202ENST00000377942 NRDCO43847 1150 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms