RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TMF1P82094 1093 aa17.21■□□□□ 0.35
USP11-204ENST00000377107 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
USP11-204ENST00000377107 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
USP11-204ENST00000377107 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
USP11-204ENST00000377107 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
USP11-204ENST00000377107 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
USP11-204ENST00000377107 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
USP11-204ENST00000377107 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
USP11-204ENST00000377107 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
USP11-204ENST00000377107 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
USP11-204ENST00000377107 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
USP11-204ENST00000377107 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
USP11-204ENST00000377107 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 NUP160Q12769 1436 aa17.16■□□□□ 0.34
USP11-204ENST00000377107 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
USP11-204ENST00000377107 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
USP11-204ENST00000377107 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
USP11-204ENST00000377107 KIF3BO15066 747 aa17.14■□□□□ 0.33
USP11-204ENST00000377107 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
USP11-204ENST00000377107 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
USP11-204ENST00000377107 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
USP11-204ENST00000377107 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
USP11-204ENST00000377107 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
USP11-204ENST00000377107 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
USP11-204ENST00000377107 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
USP11-204ENST00000377107 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
USP11-204ENST00000377107 MBD5Q9P267 1494 aa17.1■□□□□ 0.33
USP11-204ENST00000377107 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
USP11-204ENST00000377107 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
USP11-204ENST00000377107 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
USP11-204ENST00000377107 BCL11AQ9H165 835 aa17.08■□□□□ 0.33
USP11-204ENST00000377107 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
USP11-204ENST00000377107 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
USP11-204ENST00000377107 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
USP11-204ENST00000377107 KDM5CP41229 1560 aa17.07■□□□□ 0.32
USP11-204ENST00000377107 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
USP11-204ENST00000377107 TESK2Q96S53 571 aa17.07■□□□□ 0.32
USP11-204ENST00000377107 ADGBQ8N7X0 1667 aa17.07■□□□□ 0.32
USP11-204ENST00000377107 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
USP11-204ENST00000377107 CDC42BPAQ5VT25 1732 aa17.06■□□□□ 0.32
USP11-204ENST00000377107 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
USP11-204ENST00000377107 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
USP11-204ENST00000377107 ABCA8O94911 1581 aa17.05■□□□□ 0.32
USP11-204ENST00000377107 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 GGT6Q6P531 493 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 RGS3P49796 1198 aa17.02■□□□□ 0.31
USP11-204ENST00000377107 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
USP11-204ENST00000377107 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP11-204ENST00000377107 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
USP11-204ENST00000377107 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
USP11-204ENST00000377107 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
USP11-204ENST00000377107 A2MP01023 1474 aa17■□□□□ 0.31
USP11-204ENST00000377107 PPP2R1AP30153 589 aa17■□□□□ 0.31
USP11-204ENST00000377107 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 PDE4AP27815 886 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 APAF1O14727 1248 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
USP11-204ENST00000377107 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
USP11-204ENST00000377107 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
USP11-204ENST00000377107 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 PARD3Q8TEW0 1356 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
USP11-204ENST00000377107 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
USP11-204ENST00000377107 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
USP11-204ENST00000377107 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
USP11-204ENST00000377107 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
USP11-204ENST00000377107 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
USP11-204ENST00000377107 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
USP11-204ENST00000377107 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
USP11-204ENST00000377107 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
USP11-204ENST00000377107 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
USP11-204ENST00000377107 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP11-204ENST00000377107 KANK1Q14678 1352 aa16.93■□□□□ 0.3
USP11-204ENST00000377107 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
USP11-204ENST00000377107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
USP11-204ENST00000377107 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
USP11-204ENST00000377107 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
USP11-204ENST00000377107 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
USP11-204ENST00000377107 STK26Q9P289 416 aa16.89■□□□□ 0.29
USP11-204ENST00000377107 BCAR3O75815 825 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 NEFMP07197 916 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
USP11-204ENST00000377107 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
USP11-204ENST00000377107 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
USP11-204ENST00000377107 PLCH2O75038 1416 aa16.87■□□□□ 0.29
USP11-204ENST00000377107 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
USP11-204ENST00000377107 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms