RNA–Protein interactions for RNA: ENST00000375147.7

NCBP1-202, Transcript of nuclear cap binding protein subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP1, Length 5,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-202ENST00000375147 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
NCBP1-202ENST00000375147 NAP1L2Q9ULW6 460 aaPredicted RBP16.66■□□□□ 0.26
NCBP1-202ENST00000375147 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
NCBP1-202ENST00000375147 CENPJQ9HC77 1338 aaPredicted RBP16.66■□□□□ 0.26
NCBP1-202ENST00000375147 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
NCBP1-202ENST00000375147 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
NCBP1-202ENST00000375147 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
NCBP1-202ENST00000375147 ZRSR1Q15695 479 aaKnown RBP16.66■□□□□ 0.26
NCBP1-202ENST00000375147 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
NCBP1-202ENST00000375147 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
NCBP1-202ENST00000375147 COG3Q96JB2 828 aa16.65■□□□□ 0.26
NCBP1-202ENST00000375147 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 CHMP4AQ9BY43 222 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 CUX1P39880 1505 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 PRDM2Q13029 1718 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 HSCBQ8IWL3 235 aa16.64■□□□□ 0.25
NCBP1-202ENST00000375147 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
NCBP1-202ENST00000375147 FYCO1Q9BQS8 1478 aa16.63■□□□□ 0.25
NCBP1-202ENST00000375147 APAF1O14727 1248 aa16.63■□□□□ 0.25
NCBP1-202ENST00000375147 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
NCBP1-202ENST00000375147 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
NCBP1-202ENST00000375147 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
NCBP1-202ENST00000375147 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
NCBP1-202ENST00000375147 TMEM132EQ6IEE7 984 aa16.61■□□□□ 0.25
NCBP1-202ENST00000375147 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
NCBP1-202ENST00000375147 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
NCBP1-202ENST00000375147 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
NCBP1-202ENST00000375147 PMFBP1Q8TBY8 1022 aa16.6■□□□□ 0.25
NCBP1-202ENST00000375147 MCCP23508 829 aa16.59■□□□□ 0.25
NCBP1-202ENST00000375147 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
NCBP1-202ENST00000375147 PLIN1O60240 522 aa16.58■□□□□ 0.25
NCBP1-202ENST00000375147 PTMAP06454 111 aaKnown RBP16.58■□□□□ 0.25
NCBP1-202ENST00000375147 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
NCBP1-202ENST00000375147 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
NCBP1-202ENST00000375147 KIAA1211Q6ZU35 1233 aa16.57■□□□□ 0.24
NCBP1-202ENST00000375147 CFAP44Q96MT7 982 aa16.57■□□□□ 0.24
NCBP1-202ENST00000375147 PLCB2Q00722 1185 aa16.57■□□□□ 0.24
NCBP1-202ENST00000375147 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
NCBP1-202ENST00000375147 CCDC7Q96M83 1385 aa16.56■□□□□ 0.24
NCBP1-202ENST00000375147 HMMRO75330 724 aa16.55■□□□□ 0.24
NCBP1-202ENST00000375147 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
NCBP1-202ENST00000375147 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
NCBP1-202ENST00000375147 RRBP1Q9P2E9 1410 aaKnown RBP16.54■□□□□ 0.24
NCBP1-202ENST00000375147 CDK11BP21127 795 aaKnown RBP16.54■□□□□ 0.24
NCBP1-202ENST00000375147 ARHGAP5Q13017 1502 aa16.54■□□□□ 0.24
NCBP1-202ENST00000375147 E9PSI1 815 aa16.54■□□□□ 0.24
NCBP1-202ENST00000375147 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
NCBP1-202ENST00000375147 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
NCBP1-202ENST00000375147 HDAC5Q9UQL6 1122 aa16.52■□□□□ 0.24
NCBP1-202ENST00000375147 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
NCBP1-202ENST00000375147 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.23
NCBP1-202ENST00000375147 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
NCBP1-202ENST00000375147 GGNBP2Q9H3C7 697 aa16.51■□□□□ 0.23
NCBP1-202ENST00000375147 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
NCBP1-202ENST00000375147 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
NCBP1-202ENST00000375147 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
NCBP1-202ENST00000375147 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
NCBP1-202ENST00000375147 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
NCBP1-202ENST00000375147 TEFQ10587 303 aa16.5■□□□□ 0.23
NCBP1-202ENST00000375147 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
NCBP1-202ENST00000375147 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
NCBP1-202ENST00000375147 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
NCBP1-202ENST00000375147 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
NCBP1-202ENST00000375147 PSME1Q06323 249 aa16.49■□□□□ 0.23
NCBP1-202ENST00000375147 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
NCBP1-202ENST00000375147 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
NCBP1-202ENST00000375147 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
NCBP1-202ENST00000375147 RIPK4P57078 832 aa16.48■□□□□ 0.23
NCBP1-202ENST00000375147 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
NCBP1-202ENST00000375147 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
NCBP1-202ENST00000375147 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
NCBP1-202ENST00000375147 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
NCBP1-202ENST00000375147 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
NCBP1-202ENST00000375147 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
NCBP1-202ENST00000375147 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
NCBP1-202ENST00000375147 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
NCBP1-202ENST00000375147 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
NCBP1-202ENST00000375147 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
NCBP1-202ENST00000375147 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
NCBP1-202ENST00000375147 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
NCBP1-202ENST00000375147 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
NCBP1-202ENST00000375147 HMOX1P09601 288 aa16.44■□□□□ 0.22
NCBP1-202ENST00000375147 EVA1CP58658 441 aa16.44■□□□□ 0.22
NCBP1-202ENST00000375147 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
NCBP1-202ENST00000375147 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
NCBP1-202ENST00000375147 MTHFSP49914 203 aa16.43■□□□□ 0.22
NCBP1-202ENST00000375147 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
NCBP1-202ENST00000375147 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
NCBP1-202ENST00000375147 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
NCBP1-202ENST00000375147 KIAA0586Q9BVV6 1533 aa16.42■□□□□ 0.22
NCBP1-202ENST00000375147 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
NCBP1-202ENST00000375147 ANKRD45Q5TZF3 282 aa16.41■□□□□ 0.22
NCBP1-202ENST00000375147 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
NCBP1-202ENST00000375147 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
NCBP1-202ENST00000375147 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
NCBP1-202ENST00000375147 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
NCBP1-202ENST00000375147 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
NCBP1-202ENST00000375147 CENPQQ7L2Z9 268 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms