RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 COL9A1P20849 921 aa11.09□□□□□ -0.63
LINC00474-201ENST00000374014 RGS20O76081 388 aa11.08□□□□□ -0.64
LINC00474-201ENST00000374014 A0A0G2JS52 829 aa11.05□□□□□ -0.64
LINC00474-201ENST00000374014 CAMK2BQ13554 666 aa11.05□□□□□ -0.64
LINC00474-201ENST00000374014 ANKK1Q8NFD2 765 aa11.05□□□□□ -0.64
LINC00474-201ENST00000374014 DPYSL4O14531 572 aa11.02□□□□□ -0.65
LINC00474-201ENST00000374014 LAPTM4BQ86VI4 370 aa11.02□□□□□ -0.65
LINC00474-201ENST00000374014 EPAS1Q99814 870 aa11.02□□□□□ -0.65
LINC00474-201ENST00000374014 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
LINC00474-201ENST00000374014 C6orf132Q5T0Z8 1188 aa11.01□□□□□ -0.65
LINC00474-201ENST00000374014 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
LINC00474-201ENST00000374014 BCAMP50895 628 aa11□□□□□ -0.65
LINC00474-201ENST00000374014 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
LINC00474-201ENST00000374014 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
LINC00474-201ENST00000374014 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
LINC00474-201ENST00000374014 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
LINC00474-201ENST00000374014 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
LINC00474-201ENST00000374014 SEPT9Q9UHD8 586 aaPredicted RBP10.96□□□□□ -0.65
LINC00474-201ENST00000374014 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
LINC00474-201ENST00000374014 NYAP1Q6ZVC0 841 aa10.95□□□□□ -0.66
LINC00474-201ENST00000374014 DDX12PQ92771 950 aa10.95□□□□□ -0.66
LINC00474-201ENST00000374014 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
LINC00474-201ENST00000374014 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
LINC00474-201ENST00000374014 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
LINC00474-201ENST00000374014 EN1Q05925 392 aaPredicted RBP10.88□□□□□ -0.67
LINC00474-201ENST00000374014 NBR1Q14596 966 aa10.88□□□□□ -0.67
LINC00474-201ENST00000374014 MAP3K7O43318 606 aa10.87□□□□□ -0.67
LINC00474-201ENST00000374014 KCNC4Q03721 635 aa10.87□□□□□ -0.67
LINC00474-201ENST00000374014 PDIA6Q15084 440 aa10.87□□□□□ -0.67
LINC00474-201ENST00000374014 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
LINC00474-201ENST00000374014 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.87□□□□□ -0.67
LINC00474-201ENST00000374014 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
LINC00474-201ENST00000374014 PACS2Q86VP3 889 aa10.86□□□□□ -0.67
LINC00474-201ENST00000374014 LRCH3Q96II8 777 aa10.86□□□□□ -0.67
LINC00474-201ENST00000374014 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
LINC00474-201ENST00000374014 TSKSQ9UJT2 592 aa10.85□□□□□ -0.67
LINC00474-201ENST00000374014 SPDYE16A6NNV3 312 aaPredicted RBP10.83□□□□□ -0.68
LINC00474-201ENST00000374014 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
LINC00474-201ENST00000374014 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
LINC00474-201ENST00000374014 PRSS12P56730 875 aa10.78□□□□□ -0.68
LINC00474-201ENST00000374014 PPP4CP60510 307 aa10.78□□□□□ -0.68
LINC00474-201ENST00000374014 E2F4Q16254 413 aa10.78□□□□□ -0.68
LINC00474-201ENST00000374014 SMAPO00193 183 aa10.77□□□□□ -0.69
LINC00474-201ENST00000374014 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
LINC00474-201ENST00000374014 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
LINC00474-201ENST00000374014 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
LINC00474-201ENST00000374014 GRXCR2A6NFK2 248 aa10.75□□□□□ -0.69
LINC00474-201ENST00000374014 SAMD7Q7Z3H4 446 aa10.75□□□□□ -0.69
LINC00474-201ENST00000374014 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
LINC00474-201ENST00000374014 ARIH1Q9Y4X5 557 aaPredicted RBP10.75□□□□□ -0.69
LINC00474-201ENST00000374014 TATDN2Q93075 761 aa10.73□□□□□ -0.69
LINC00474-201ENST00000374014 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
LINC00474-201ENST00000374014 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
LINC00474-201ENST00000374014 Q6ZNB5 142 aa10.72□□□□□ -0.69
LINC00474-201ENST00000374014 WDR70Q9NW82 654 aa10.72□□□□□ -0.69
LINC00474-201ENST00000374014 NBPF26B4DH59 902 aa10.71□□□□□ -0.69
LINC00474-201ENST00000374014 PNMA3Q9UL41 463 aa10.71□□□□□ -0.69
LINC00474-201ENST00000374014 OSBPP22059 807 aa10.69□□□□□ -0.7
LINC00474-201ENST00000374014 CDHR5Q9HBB8 845 aa10.68□□□□□ -0.7
LINC00474-201ENST00000374014 NUDT18Q6ZVK8 323 aa10.67□□□□□ -0.7
LINC00474-201ENST00000374014 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
LINC00474-201ENST00000374014 MTRQ99707 1265 aa10.67□□□□□ -0.7
LINC00474-201ENST00000374014 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
LINC00474-201ENST00000374014 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
LINC00474-201ENST00000374014 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
LINC00474-201ENST00000374014 IL21Q9HBE4 155 aa10.66□□□□□ -0.7
LINC00474-201ENST00000374014 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
LINC00474-201ENST00000374014 RNF40O75150 1001 aa10.63□□□□□ -0.71
LINC00474-201ENST00000374014 GFRA3O60609 400 aa10.62□□□□□ -0.71
LINC00474-201ENST00000374014 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
LINC00474-201ENST00000374014 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
LINC00474-201ENST00000374014 APLP1P51693 650 aa10.61□□□□□ -0.71
LINC00474-201ENST00000374014 TTC13Q8NBP0 860 aa10.61□□□□□ -0.71
LINC00474-201ENST00000374014 ZNF516Q92618 1163 aa10.61□□□□□ -0.71
LINC00474-201ENST00000374014 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
LINC00474-201ENST00000374014 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
LINC00474-201ENST00000374014 PADI6Q6TGC4 694 aa10.59□□□□□ -0.71
LINC00474-201ENST00000374014 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.58□□□□□ -0.72
LINC00474-201ENST00000374014 LCE2BO14633 110 aa10.57□□□□□ -0.72
LINC00474-201ENST00000374014 SWT1Q5T5J6 900 aaKnown RBP10.57□□□□□ -0.72
LINC00474-201ENST00000374014 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
LINC00474-201ENST00000374014 V9GY48 417 aaPredicted RBP10.57□□□□□ -0.72
LINC00474-201ENST00000374014 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
LINC00474-201ENST00000374014 SLF2Q8IX21 1173 aa10.56□□□□□ -0.72
LINC00474-201ENST00000374014 NKX2-3Q8TAU0 364 aa10.55□□□□□ -0.72
LINC00474-201ENST00000374014 NRG2O14511 850 aaPredicted RBP10.53□□□□□ -0.72
LINC00474-201ENST00000374014 EYA1Q99502 592 aa10.53□□□□□ -0.72
LINC00474-201ENST00000374014 COPS2P61201 443 aa10.52□□□□□ -0.73
LINC00474-201ENST00000374014 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
LINC00474-201ENST00000374014 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
LINC00474-201ENST00000374014 GGCXP38435 758 aa10.5□□□□□ -0.73
LINC00474-201ENST00000374014 ZPR1O75312 459 aa10.47□□□□□ -0.73
LINC00474-201ENST00000374014 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
LINC00474-201ENST00000374014 ARHGEF1Q92888 912 aaKnown RBP10.47□□□□□ -0.73
LINC00474-201ENST00000374014 TMUB1Q9BVT8 246 aa10.47□□□□□ -0.73
LINC00474-201ENST00000374014 PRR14Q9BWN1 585 aa10.46□□□□□ -0.73
LINC00474-201ENST00000374014 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.73
LINC00474-201ENST00000374014 PTGDRQ13258 359 aa10.44□□□□□ -0.74
LINC00474-201ENST00000374014 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
LINC00474-201ENST00000374014 DNAJB2P25686 324 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms