RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 NAP1L1P55209 391 aaKnown RBP18.78■□□□□ 0.6
GTF3C4-201ENST00000372146 RBM10P98175 930 aaKnown RBP18.78■□□□□ 0.6
GTF3C4-201ENST00000372146 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
GTF3C4-201ENST00000372146 NEFHP12036 1026 aa18.77■□□□□ 0.6
GTF3C4-201ENST00000372146 CCER2I3L3R5 266 aa18.77■□□□□ 0.6
GTF3C4-201ENST00000372146 DEF6Q9H4E7 631 aa18.76■□□□□ 0.59
GTF3C4-201ENST00000372146 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
GTF3C4-201ENST00000372146 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
GTF3C4-201ENST00000372146 TAF3Q5VWG9 929 aa18.75■□□□□ 0.59
GTF3C4-201ENST00000372146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.75■□□□□ 0.59
GTF3C4-201ENST00000372146 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
GTF3C4-201ENST00000372146 MARCH6O60337 910 aa18.74■□□□□ 0.59
GTF3C4-201ENST00000372146 MCTP1Q6DN14 999 aa18.74■□□□□ 0.59
GTF3C4-201ENST00000372146 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
GTF3C4-201ENST00000372146 ANKRD20A12PQ8NF67 263 aa18.74■□□□□ 0.59
GTF3C4-201ENST00000372146 KIAA0754O94854 1291 aa18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 FAM184AQ8NB25 1140 aa18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 FBXW7Q969H0 707 aa18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 INCENPQ9NQS7 918 aa18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
GTF3C4-201ENST00000372146 CCDC39Q9UFE4 941 aa18.72■□□□□ 0.59
GTF3C4-201ENST00000372146 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
GTF3C4-201ENST00000372146 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
GTF3C4-201ENST00000372146 ERCC4Q92889 916 aaPredicted RBP18.71■□□□□ 0.59
GTF3C4-201ENST00000372146 CLIP1P30622 1438 aa18.71■□□□□ 0.59
GTF3C4-201ENST00000372146 AXDND1Q5T1B0 1012 aaPredicted RBP18.71■□□□□ 0.59
GTF3C4-201ENST00000372146 NEXNQ0ZGT2 675 aa18.71■□□□□ 0.59
GTF3C4-201ENST00000372146 ZRSR2Q15696 482 aaKnown RBP18.7■□□□□ 0.58
GTF3C4-201ENST00000372146 POGKQ9P215 609 aa18.7■□□□□ 0.58
GTF3C4-201ENST00000372146 FAM161AQ3B820 660 aa18.68■□□□□ 0.58
GTF3C4-201ENST00000372146 ERICH4A6NGS2 130 aa18.68■□□□□ 0.58
GTF3C4-201ENST00000372146 HOOK1Q9UJC3 728 aaKnown RBP18.68■□□□□ 0.58
GTF3C4-201ENST00000372146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■■ 149.1
GTF3C4-201ENST00000372146 GOLGA6L7A0A1B0GV03 622 aa18.67■□□□□ 0.58
GTF3C4-201ENST00000372146 GIMAP7Q8NHV1 300 aa18.67■□□□□ 0.58
GTF3C4-201ENST00000372146 MYO6Q9UM54 1294 aa18.66■□□□□ 0.58
GTF3C4-201ENST00000372146 CLASRPQ8N2M8 674 aaKnown RBP18.66■□□□□ 0.58
GTF3C4-201ENST00000372146 RBM25P49756 843 aaKnown RBP18.66■□□□□ 0.58
GTF3C4-201ENST00000372146 SOX12O15370 315 aa18.66■□□□□ 0.58
GTF3C4-201ENST00000372146 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
GTF3C4-201ENST00000372146 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
GTF3C4-201ENST00000372146 USP8P40818 1118 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 SASS6Q6UVJ0 657 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 NPM1P06748 294 aaKnown RBP eCLIP18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 TMF1P82094 1093 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 TTLL5Q6EMB2 1281 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 PDE4AP27815 886 aa18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 RRP9O43818 475 aaKnown RBP18.65■□□□□ 0.58
GTF3C4-201ENST00000372146 CT47B1P0C2W7 299 aaPredicted RBP18.64■□□□□ 0.57
GTF3C4-201ENST00000372146 CT47A1Q5JQC4 288 aaPredicted RBP18.64■□□□□ 0.57
GTF3C4-201ENST00000372146 TOMM22Q9NS69 142 aa18.64■□□□□ 0.57
GTF3C4-201ENST00000372146 ODF2Q5BJF6 829 aa18.64■□□□□ 0.57
GTF3C4-201ENST00000372146 CENPHQ9H3R5 247 aa18.63■□□□□ 0.57
GTF3C4-201ENST00000372146 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
GTF3C4-201ENST00000372146 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
GTF3C4-201ENST00000372146 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
GTF3C4-201ENST00000372146 GOLGA6L10A6NI86 522 aa18.62■□□□□ 0.57
GTF3C4-201ENST00000372146 ENOX2Q16206 610 aaKnown RBP18.61■□□□□ 0.57
GTF3C4-201ENST00000372146 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
GTF3C4-201ENST00000372146 EEA1Q15075 1411 aa18.61■□□□□ 0.57
GTF3C4-201ENST00000372146 GPATCH11Q8N954 259 aa18.61■□□□□ 0.57
GTF3C4-201ENST00000372146 KRI1Q8N9T8 703 aaKnown RBP18.61■□□□□ 0.57
GTF3C4-201ENST00000372146 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
GTF3C4-201ENST00000372146 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
GTF3C4-201ENST00000372146 PDILTQ8N807 584 aa18.6■□□□□ 0.57
GTF3C4-201ENST00000372146 IL27Q8NEV9 243 aa18.6■□□□□ 0.57
GTF3C4-201ENST00000372146 TCEAL9Q9UHQ7 104 aa18.6■□□□□ 0.57
GTF3C4-201ENST00000372146 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
GTF3C4-201ENST00000372146 ZNF330Q9Y3S2 320 aaPredicted RBP18.59■□□□□ 0.57
GTF3C4-201ENST00000372146 CENPQQ7L2Z9 268 aaPredicted RBP18.58■□□□□ 0.57
GTF3C4-201ENST00000372146 ZNF526Q8TF50 670 aaPredicted RBP18.58■□□□□ 0.57
GTF3C4-201ENST00000372146 NAT10Q9H0A0 1025 aaKnown RBP18.58■□□□□ 0.57
GTF3C4-201ENST00000372146 UQCRHLA0A096LP55 91 aa18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 UQCRHP07919 91 aa18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 CCAR1Q8IX12 1150 aaKnown RBP18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 EPS15P42566 896 aa18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 CGNL1Q0VF96 1302 aa18.57■□□□□ 0.56
GTF3C4-201ENST00000372146 HMGN5P82970 282 aaKnown RBP18.56■□□□□ 0.56
GTF3C4-201ENST00000372146 SLC4A10Q6U841 1118 aa18.56■□□□□ 0.56
GTF3C4-201ENST00000372146 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
GTF3C4-201ENST00000372146 MRE11P49959 708 aa18.56■□□□□ 0.56
GTF3C4-201ENST00000372146 CENPJQ9HC77 1338 aaPredicted RBP18.54■□□□□ 0.56
GTF3C4-201ENST00000372146 TRIM29Q14134 588 aa18.54■□□□□ 0.56
GTF3C4-201ENST00000372146 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
GTF3C4-201ENST00000372146 TICAM2Q86XR7 235 aa18.54■□□□□ 0.56
GTF3C4-201ENST00000372146 ZFYVE27Q5T4F4 411 aa18.53■□□□□ 0.56
GTF3C4-201ENST00000372146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.53■□□□□ 0.56
GTF3C4-201ENST00000372146 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
GTF3C4-201ENST00000372146 SEPT7Q16181 437 aaKnown RBP18.53■□□□□ 0.56
GTF3C4-201ENST00000372146 CCDC47Q96A33 483 aaKnown RBP18.53■□□□□ 0.56
GTF3C4-201ENST00000372146 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
GTF3C4-201ENST00000372146 STK31Q9BXU1 1019 aa18.52■□□□□ 0.56
GTF3C4-201ENST00000372146 GOLGA3Q08378 1498 aa18.52■□□□□ 0.56
GTF3C4-201ENST00000372146 SPAG9O60271 1321 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms