RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 RASSF8Q8NHQ8 419 aa27.62■■■□□ 2.01
TM9SF3-201ENST00000371142 FOXD4L4Q8WXT5 416 aaPredicted RBP27.62■■■□□ 2.01
TM9SF3-201ENST00000371142 NLRP13Q86W25 1043 aa27.61■■■□□ 2.01
TM9SF3-201ENST00000371142 WASHC2CQ9Y4E1 1318 aa27.61■■■□□ 2.01
TM9SF3-201ENST00000371142 EID1Q9Y6B2 187 aa27.61■■■□□ 2.01
TM9SF3-201ENST00000371142 IPO9Q96P70 1041 aaKnown RBP27.6■■■□□ 2.01
TM9SF3-201ENST00000371142 TRAK1Q9UPV9 953 aa27.6■■■□□ 2.01
TM9SF3-201ENST00000371142 PDE4CQ08493 712 aa27.6■■■□□ 2.01
TM9SF3-201ENST00000371142 TOMM22Q9NS69 142 aa27.59■■■□□ 2.01
TM9SF3-201ENST00000371142 HDAC5Q9UQL6 1122 aa27.59■■■□□ 2.01
TM9SF3-201ENST00000371142 LMOD3Q0VAK6 560 aa27.58■■■□□ 2.01
TM9SF3-201ENST00000371142 G3V3G9 751 aa27.57■■■□□ 2
TM9SF3-201ENST00000371142 DCAF8Q5TAQ9 597 aa27.57■■■□□ 2
TM9SF3-201ENST00000371142 CSPP1Q1MSJ5 1256 aa27.55■■■□□ 2
TM9SF3-201ENST00000371142 TSHZ2Q9NRE2 1034 aa27.55■■■□□ 2
TM9SF3-201ENST00000371142 CCDC34Q96HJ3 373 aa27.54■■■□□ 2
TM9SF3-201ENST00000371142 FHOD3Q2V2M9 1422 aa27.53■■■□□ 2
TM9SF3-201ENST00000371142 FRAT2O75474 233 aaPredicted RBP27.53■■■□□ 2
TM9SF3-201ENST00000371142 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
TM9SF3-201ENST00000371142 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.52■■■□□ 2
TM9SF3-201ENST00000371142 ELL2O00472 640 aaPredicted RBP27.52■■■□□ 2
TM9SF3-201ENST00000371142 KIF16BQ96L93 1317 aa27.51■■■□□ 2
TM9SF3-201ENST00000371142 PDE3BQ13370 1112 aa27.51■■□□□ 1.99
TM9SF3-201ENST00000371142 ST18O60284 1047 aa27.51■■□□□ 1.99
TM9SF3-201ENST00000371142 BCL2L13Q9BXK5 485 aa27.51■■□□□ 1.99
TM9SF3-201ENST00000371142 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
TM9SF3-201ENST00000371142 PANK3Q9H999 370 aa27.49■■□□□ 1.99
TM9SF3-201ENST00000371142 KIF15Q9NS87 1388 aa27.49■■□□□ 1.99
TM9SF3-201ENST00000371142 GTF2E1P29083 439 aaPredicted RBP27.48■■□□□ 1.99
TM9SF3-201ENST00000371142 RILPL2Q969X0 211 aa27.48■■□□□ 1.99
TM9SF3-201ENST00000371142 MYBBP1AQ9BQG0 1328 aaKnown RBP27.46■■□□□ 1.99
TM9SF3-201ENST00000371142 PLIN1O60240 522 aa27.45■■□□□ 1.99
TM9SF3-201ENST00000371142 SF3A1Q15459 793 aaKnown RBP27.45■■□□□ 1.99
TM9SF3-201ENST00000371142 ST20-MTHFSA0A0A6YYL1 179 aa27.45■■□□□ 1.99
TM9SF3-201ENST00000371142 VPS53Q5VIR6 699 aa27.45■■□□□ 1.99
TM9SF3-201ENST00000371142 PHLDB1Q86UU1 1377 aa27.44■■□□□ 1.98
TM9SF3-201ENST00000371142 A0A0U1RQG5 324 aaPredicted RBP27.44■■□□□ 1.98
TM9SF3-201ENST00000371142 ANKRD45Q5TZF3 282 aa27.43■■□□□ 1.98
TM9SF3-201ENST00000371142 CCDC18Q5T9S5 1454 aa27.43■■□□□ 1.98
TM9SF3-201ENST00000371142 MARCH6O60337 910 aa27.42■■□□□ 1.98
TM9SF3-201ENST00000371142 PRM3Q9NNZ6 103 aa27.42■■□□□ 1.98
TM9SF3-201ENST00000371142 PHF14O94880 888 aa27.41■■□□□ 1.98
TM9SF3-201ENST00000371142 FOXD4L6Q3SYB3 417 aaPredicted RBP27.41■■□□□ 1.98
TM9SF3-201ENST00000371142 FOXD4L3Q6VB84 417 aaPredicted RBP27.41■■□□□ 1.98
TM9SF3-201ENST00000371142 H3BQV1 296 aa27.4■■□□□ 1.98
TM9SF3-201ENST00000371142 IFFO2Q5TF58 517 aa27.4■■□□□ 1.98
TM9SF3-201ENST00000371142 SLC4A3P48751 1232 aa27.39■■□□□ 1.97
TM9SF3-201ENST00000371142 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
TM9SF3-201ENST00000371142 GOLGA6L1Q8N7Z2 621 aa27.38■■□□□ 1.97
TM9SF3-201ENST00000371142 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
TM9SF3-201ENST00000371142 CCDC144AA2RUR9 1427 aa27.37■■□□□ 1.97
TM9SF3-201ENST00000371142 PES1O00541 588 aaKnown RBP27.37■■□□□ 1.97
TM9SF3-201ENST00000371142 KIF3AQ9Y496 699 aa27.37■■□□□ 1.97
TM9SF3-201ENST00000371142 COG3Q96JB2 828 aa27.36■■□□□ 1.97
TM9SF3-201ENST00000371142 RAPGEF2Q9Y4G8 1499 aa27.36■■□□□ 1.97
TM9SF3-201ENST00000371142 C1orf141Q5JVX7 400 aa27.36■■□□□ 1.97
TM9SF3-201ENST00000371142 ANO8Q9HCE9 1232 aaPredicted RBP27.35■■□□□ 1.97
TM9SF3-201ENST00000371142 CENPQQ7L2Z9 268 aaPredicted RBP27.35■■□□□ 1.97
TM9SF3-201ENST00000371142 TPM3P06753 285 aa27.35■■□□□ 1.97
TM9SF3-201ENST00000371142 NGEFQ8N5V2 710 aa27.35■■□□□ 1.97
TM9SF3-201ENST00000371142 FAM184AQ8NB25 1140 aa27.34■■□□□ 1.97
TM9SF3-201ENST00000371142 DDX11L8A8MPP1 907 aa27.33■■□□□ 1.97
TM9SF3-201ENST00000371142 EXOC6Q8TAG9 804 aa27.33■■□□□ 1.97
TM9SF3-201ENST00000371142 CRBNQ96SW2 442 aa27.33■■□□□ 1.97
TM9SF3-201ENST00000371142 ZKSCAN2Q63HK3 967 aa27.33■■□□□ 1.97
TM9SF3-201ENST00000371142 TPD52L1Q16890 204 aaPredicted RBP27.31■■□□□ 1.96
TM9SF3-201ENST00000371142 FAM161AQ3B820 660 aa27.31■■□□□ 1.96
TM9SF3-201ENST00000371142 CGNL1Q0VF96 1302 aa27.31■■□□□ 1.96
TM9SF3-201ENST00000371142 COG6Q9Y2V7 657 aa27.31■■□□□ 1.96
TM9SF3-201ENST00000371142 TNNT3P45378 269 aaPredicted RBP27.3■■□□□ 1.96
TM9SF3-201ENST00000371142 E9PSI1 815 aa27.3■■□□□ 1.96
TM9SF3-201ENST00000371142 PDE4AP27815 886 aa27.3■■□□□ 1.96
TM9SF3-201ENST00000371142 CEP89Q96ST8 783 aa27.3■■□□□ 1.96
TM9SF3-201ENST00000371142 EIF2S2P20042 333 aaKnown RBP27.29■■□□□ 1.96
TM9SF3-201ENST00000371142 MINK1Q8N4C8 1332 aaPredicted RBP27.29■■□□□ 1.96
TM9SF3-201ENST00000371142 RRP1P56182 461 aaKnown RBP27.28■■□□□ 1.96
TM9SF3-201ENST00000371142 DDX49Q9Y6V7 483 aaKnown RBP27.28■■□□□ 1.96
TM9SF3-201ENST00000371142 EVC2Q86UK5 1308 aa27.28■■□□□ 1.96
TM9SF3-201ENST00000371142 NECTIN2Q92692 538 aa27.27■■□□□ 1.96
TM9SF3-201ENST00000371142 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
TM9SF3-201ENST00000371142 EVA1CP58658 441 aa27.27■■□□□ 1.96
TM9SF3-201ENST00000371142 TEFQ10587 303 aa27.26■■□□□ 1.95
TM9SF3-201ENST00000371142 MCTP1Q6DN14 999 aa27.26■■□□□ 1.95
TM9SF3-201ENST00000371142 AKAP17AQ02040 695 aaKnown RBP27.26■■□□□ 1.95
TM9SF3-201ENST00000371142 DIAPH3Q9NSV4 1193 aa27.25■■□□□ 1.95
TM9SF3-201ENST00000371142 UACAQ9BZF9 1416 aa27.23■■□□□ 1.95
TM9SF3-201ENST00000371142 GOLGA6L19H0YKK7 550 aa27.23■■□□□ 1.95
TM9SF3-201ENST00000371142 APAF1O14727 1248 aa27.23■■□□□ 1.95
TM9SF3-201ENST00000371142 PRKRIP1Q9H875 184 aaPredicted RBP27.22■■□□□ 1.95
TM9SF3-201ENST00000371142 TTC5Q8N0Z6 440 aa27.22■■□□□ 1.95
TM9SF3-201ENST00000371142 C9orf78Q9NZ63 289 aaPredicted RBP27.21■■□□□ 1.95
TM9SF3-201ENST00000371142 VGFO15240 615 aaPredicted RBP27.21■■□□□ 1.95
TM9SF3-201ENST00000371142 USP47Q96K76 1375 aa27.21■■□□□ 1.95
TM9SF3-201ENST00000371142 RAD21O60216 631 aa27.2■■□□□ 1.95
TM9SF3-201ENST00000371142 WIZO95785 1651 aa27.2■■□□□ 1.95
TM9SF3-201ENST00000371142 BECN2A8MW95 431 aa27.2■■□□□ 1.94
TM9SF3-201ENST00000371142 CCAR2Q8N163 923 aaKnown RBP27.2■■□□□ 1.94
TM9SF3-201ENST00000371142 NEXNQ0ZGT2 675 aa27.19■■□□□ 1.94
TM9SF3-201ENST00000371142 SYNE3Q6ZMZ3 975 aa27.19■■□□□ 1.94
TM9SF3-201ENST00000371142 DHX57Q6P158 1386 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms