RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
LMNA-206ENST00000368300 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
LMNA-206ENST00000368300 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
LMNA-206ENST00000368300 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
LMNA-206ENST00000368300 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
LMNA-206ENST00000368300 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
LMNA-206ENST00000368300 BCANQ96GW7 911 aa17■□□□□ 0.31
LMNA-206ENST00000368300 ABCC1P33527 1531 aa16.99■□□□□ 0.31
LMNA-206ENST00000368300 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
LMNA-206ENST00000368300 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
LMNA-206ENST00000368300 DUOX2Q9NRD8 1548 aa16.98■□□□□ 0.31
LMNA-206ENST00000368300 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
LMNA-206ENST00000368300 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
LMNA-206ENST00000368300 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
LMNA-206ENST00000368300 FANCAO15360 1455 aa16.97■□□□□ 0.31
LMNA-206ENST00000368300 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
LMNA-206ENST00000368300 FKBP8Q14318 412 aa16.96■□□□□ 0.31
LMNA-206ENST00000368300 BCORL1Q5H9F3 1711 aa16.96■□□□□ 0.31
LMNA-206ENST00000368300 PLXNC1O60486 1568 aa16.96■□□□□ 0.3
LMNA-206ENST00000368300 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.3
LMNA-206ENST00000368300 KIF3BO15066 747 aa16.95■□□□□ 0.3
LMNA-206ENST00000368300 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
LMNA-206ENST00000368300 UNC13BO14795 1591 aa16.94■□□□□ 0.3
LMNA-206ENST00000368300 KDM5CP41229 1560 aa16.93■□□□□ 0.3
LMNA-206ENST00000368300 ANP32EQ9BTT0 268 aa16.93■□□□□ 0.3
LMNA-206ENST00000368300 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
LMNA-206ENST00000368300 PRAG1Q86YV5 1406 aa16.91■□□□□ 0.3
LMNA-206ENST00000368300 A2MP01023 1474 aa16.91■□□□□ 0.3
LMNA-206ENST00000368300 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
LMNA-206ENST00000368300 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
LMNA-206ENST00000368300 IQGAP3Q86VI3 1631 aa16.89■□□□□ 0.3
LMNA-206ENST00000368300 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
LMNA-206ENST00000368300 RTEL1-TNFRSF6BF6WH68 1400 aa16.88■□□□□ 0.29
LMNA-206ENST00000368300 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
LMNA-206ENST00000368300 ARAP3Q8WWN8 1544 aa16.85■□□□□ 0.29
LMNA-206ENST00000368300 ABCA9Q8IUA7 1624 aa16.84■□□□□ 0.29
LMNA-206ENST00000368300 NEFLP07196 543 aa16.84■□□□□ 0.29
LMNA-206ENST00000368300 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
LMNA-206ENST00000368300 ARID4BQ4LE39 1312 aaPredicted RBP16.84■□□□□ 0.29
LMNA-206ENST00000368300 IRX6P78412 446 aaPredicted RBP16.83■□□□□ 0.29
LMNA-206ENST00000368300 CD109Q6YHK3 1445 aa16.82■□□□□ 0.28
LMNA-206ENST00000368300 ATP10AO60312 1499 aa16.81■□□□□ 0.28
LMNA-206ENST00000368300 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
LMNA-206ENST00000368300 KANK1Q14678 1352 aa16.81■□□□□ 0.28
LMNA-206ENST00000368300 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
LMNA-206ENST00000368300 GGT6Q6P531 493 aa16.81■□□□□ 0.28
LMNA-206ENST00000368300 POLR1AO95602 1720 aaPredicted RBP16.8■□□□□ 0.28
LMNA-206ENST00000368300 TESK2Q96S53 571 aa16.8■□□□□ 0.28
LMNA-206ENST00000368300 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
LMNA-206ENST00000368300 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
LMNA-206ENST00000368300 E9PCH4 1651 aa16.78■□□□□ 0.28
LMNA-206ENST00000368300 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
LMNA-206ENST00000368300 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
LMNA-206ENST00000368300 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.27
LMNA-206ENST00000368300 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
LMNA-206ENST00000368300 PTPRTO14522 1441 aa16.74■□□□□ 0.27
LMNA-206ENST00000368300 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
LMNA-206ENST00000368300 UGGT1Q9NYU2 1555 aa16.74■□□□□ 0.27
LMNA-206ENST00000368300 PANK3Q9H999 370 aa16.73■□□□□ 0.27
LMNA-206ENST00000368300 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
LMNA-206ENST00000368300 TMF1P82094 1093 aa16.73■□□□□ 0.27
LMNA-206ENST00000368300 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
LMNA-206ENST00000368300 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
LMNA-206ENST00000368300 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
LMNA-206ENST00000368300 PER1O15534 1290 aaPredicted RBP16.71■□□□□ 0.27
LMNA-206ENST00000368300 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
LMNA-206ENST00000368300 TRPM2O94759 1503 aa16.71■□□□□ 0.27
LMNA-206ENST00000368300 KIDINS220Q9ULH0 1771 aa16.71■□□□□ 0.27
LMNA-206ENST00000368300 ADGRF5Q8IZF2 1346 aa16.71■□□□□ 0.26
LMNA-206ENST00000368300 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
LMNA-206ENST00000368300 PRDM15P57071 1507 aaPredicted RBP16.69■□□□□ 0.26
LMNA-206ENST00000368300 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
LMNA-206ENST00000368300 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
LMNA-206ENST00000368300 MROH1Q8NDA8 1641 aa16.68■□□□□ 0.26
LMNA-206ENST00000368300 RALBP1Q15311 655 aa16.68■□□□□ 0.26
LMNA-206ENST00000368300 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
LMNA-206ENST00000368300 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
LMNA-206ENST00000368300 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
LMNA-206ENST00000368300 TET3O43151 1660 aa16.67■□□□□ 0.26
LMNA-206ENST00000368300 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
LMNA-206ENST00000368300 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
LMNA-206ENST00000368300 SPHKAPQ2M3C7 1700 aa16.67■□□□□ 0.26
LMNA-206ENST00000368300 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
LMNA-206ENST00000368300 KTN1Q86UP2 1357 aaKnown RBP16.66■□□□□ 0.26
LMNA-206ENST00000368300 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
LMNA-206ENST00000368300 EIF2AK4Q9P2K8 1649 aaKnown RBP16.65■□□□□ 0.26
LMNA-206ENST00000368300 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.25
LMNA-206ENST00000368300 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
LMNA-206ENST00000368300 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
LMNA-206ENST00000368300 NLRP13Q86W25 1043 aa16.62■□□□□ 0.25
LMNA-206ENST00000368300 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
LMNA-206ENST00000368300 NPATQ14207 1427 aa16.61■□□□□ 0.25
LMNA-206ENST00000368300 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
LMNA-206ENST00000368300 FRMPD1Q5SYB0 1578 aa16.61■□□□□ 0.25
LMNA-206ENST00000368300 BRD4O60885 1362 aaPredicted RBP16.61■□□□□ 0.25
LMNA-206ENST00000368300 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
LMNA-206ENST00000368300 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
LMNA-206ENST00000368300 EFCAB6Q5THR3 1501 aa16.61■□□□□ 0.25
LMNA-206ENST00000368300 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
LMNA-206ENST00000368300 CEP152O94986 1710 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms