RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CLUAP1Q96AJ1 413 aa14.89□□□□□ -0.03
COPA-202ENST00000368069 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
COPA-202ENST00000368069 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
COPA-202ENST00000368069 NAIPQ13075 1403 aa14.89□□□□□ -0.03
COPA-202ENST00000368069 MIA2Q96PC5 1412 aa14.89□□□□□ -0.03
COPA-202ENST00000368069 SLKQ9H2G2 1235 aaPredicted RBP14.89□□□□□ -0.03
COPA-202ENST00000368069 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
COPA-202ENST00000368069 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
COPA-202ENST00000368069 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
COPA-202ENST00000368069 RRP7AQ9Y3A4 280 aaKnown RBP14.87□□□□□ -0.03
COPA-202ENST00000368069 SOX12O15370 315 aa14.86□□□□□ -0.03
COPA-202ENST00000368069 CENPQQ7L2Z9 268 aaPredicted RBP14.86□□□□□ -0.03
COPA-202ENST00000368069 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
COPA-202ENST00000368069 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
COPA-202ENST00000368069 MAP3K1Q13233 1512 aa14.86□□□□□ -0.03
COPA-202ENST00000368069 CCDC184Q52MB2 194 aa14.86□□□□□ -0.03
COPA-202ENST00000368069 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
COPA-202ENST00000368069 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
COPA-202ENST00000368069 HECW1Q76N89 1606 aa14.84□□□□□ -0.03
COPA-202ENST00000368069 WASHC2CQ9Y4E1 1318 aa14.84□□□□□ -0.03
COPA-202ENST00000368069 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
COPA-202ENST00000368069 APAF1O14727 1248 aa14.84□□□□□ -0.03
COPA-202ENST00000368069 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.03
COPA-202ENST00000368069 KIAA1107Q9UPP5 1409 aa14.82□□□□□ -0.04
COPA-202ENST00000368069 E9PSI1 815 aa14.82□□□□□ -0.04
COPA-202ENST00000368069 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
COPA-202ENST00000368069 DAPK1P53355 1430 aa14.82□□□□□ -0.04
COPA-202ENST00000368069 FAM161AQ3B820 660 aa14.82□□□□□ -0.04
COPA-202ENST00000368069 TPRNQ4KMQ1 711 aa14.82□□□□□ -0.04
COPA-202ENST00000368069 L1TD1Q5T7N2 865 aaKnown RBP14.81□□□□□ -0.04
COPA-202ENST00000368069 TERF2IPQ9NYB0 399 aa14.81□□□□□ -0.04
COPA-202ENST00000368069 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
COPA-202ENST00000368069 SLC4A3P48751 1232 aa14.81□□□□□ -0.04
COPA-202ENST00000368069 MFAP1P55081 439 aaKnown RBP14.81□□□□□ -0.04
COPA-202ENST00000368069 BCL2L13Q9BXK5 485 aa14.81□□□□□ -0.04
COPA-202ENST00000368069 NAP1L5Q96NT1 182 aaPredicted RBP14.8□□□□□ -0.04
COPA-202ENST00000368069 CALD1Q05682 793 aaKnown RBP14.79□□□□□ -0.04
COPA-202ENST00000368069 EPRSP07814 1512 aaKnown RBP14.79□□□□□ -0.04
COPA-202ENST00000368069 APBB1O00213 710 aa14.79□□□□□ -0.04
COPA-202ENST00000368069 PTMAP06454 111 aaKnown RBP14.79□□□□□ -0.04
COPA-202ENST00000368069 TROQ12816 1431 aaPredicted RBP14.79□□□□□ -0.04
COPA-202ENST00000368069 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
COPA-202ENST00000368069 AKNAQ7Z591 1439 aa14.78□□□□□ -0.04
COPA-202ENST00000368069 COG6Q9Y2V7 657 aa14.78□□□□□ -0.04
COPA-202ENST00000368069 HAP1P54257 671 aaPredicted RBP14.78□□□□□ -0.04
COPA-202ENST00000368069 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
COPA-202ENST00000368069 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.05
COPA-202ENST00000368069 NBPF1Q3BBV0 1214 aa14.77□□□□□ -0.05
COPA-202ENST00000368069 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.05
COPA-202ENST00000368069 GZF1Q9H116 711 aaPredicted RBP14.77□□□□□ -0.05
COPA-202ENST00000368069 CGNL1Q0VF96 1302 aa14.76□□□□□ -0.05
COPA-202ENST00000368069 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
COPA-202ENST00000368069 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
COPA-202ENST00000368069 CUL7Q14999 1698 aa14.75□□□□□ -0.05
COPA-202ENST00000368069 PTPN23Q9H3S7 1636 aa14.75□□□□□ -0.05
COPA-202ENST00000368069 OS9Q13438 667 aaPredicted RBP14.75□□□□□ -0.05
COPA-202ENST00000368069 PNISRQ8TF01 805 aaKnown RBP14.75□□□□□ -0.05
COPA-202ENST00000368069 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
COPA-202ENST00000368069 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
COPA-202ENST00000368069 IFT140Q96RY7 1462 aa14.74□□□□□ -0.05
COPA-202ENST00000368069 C11orf95C9JLR9 678 aaPredicted RBP14.74□□□□□ -0.05
COPA-202ENST00000368069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■■■□□ 15.9
COPA-202ENST00000368069 SYNJ2O15056 1496 aa14.73□□□□□ -0.05
COPA-202ENST00000368069 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
COPA-202ENST00000368069 ARHGAP5Q13017 1502 aa14.73□□□□□ -0.05
COPA-202ENST00000368069 EVC2Q86UK5 1308 aa14.73□□□□□ -0.05
COPA-202ENST00000368069 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
COPA-202ENST00000368069 SNAPC4Q5SXM2 1469 aa14.72□□□□□ -0.05
COPA-202ENST00000368069 MAPKBP1O60336 1514 aa14.72□□□□□ -0.05
COPA-202ENST00000368069 GBP4Q96PP9 640 aa14.71□□□□□ -0.05
COPA-202ENST00000368069 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
COPA-202ENST00000368069 ZKSCAN2Q63HK3 967 aa14.71□□□□□ -0.05
COPA-202ENST00000368069 ANKRD30BQ9BXX2 1392 aa14.71□□□□□ -0.05
COPA-202ENST00000368069 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
COPA-202ENST00000368069 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
COPA-202ENST00000368069 STAC3Q96MF2 364 aa14.7□□□□□ -0.06
COPA-202ENST00000368069 NGEFQ8N5V2 710 aa14.7□□□□□ -0.06
COPA-202ENST00000368069 MCCP23508 829 aa14.7□□□□□ -0.06
COPA-202ENST00000368069 DNTTIP2Q5QJE6 756 aaKnown RBP14.69□□□□□ -0.06
COPA-202ENST00000368069 PPP2R1AP30153 589 aa14.69□□□□□ -0.06
COPA-202ENST00000368069 AFAP1Q8N556 730 aa14.68□□□□□ -0.06
COPA-202ENST00000368069 A0A0G2JS52 829 aa14.68□□□□□ -0.06
COPA-202ENST00000368069 KIAA0586Q9BVV6 1533 aa14.68□□□□□ -0.06
COPA-202ENST00000368069 KCNJ4P48050 445 aa14.68□□□□□ -0.06
COPA-202ENST00000368069 MINK1Q8N4C8 1332 aaPredicted RBP14.68□□□□□ -0.06
COPA-202ENST00000368069 ABCC5O15440 1437 aa14.68□□□□□ -0.06
COPA-202ENST00000368069 PLCB2Q00722 1185 aa14.67□□□□□ -0.06
COPA-202ENST00000368069 RUNDC1Q96C34 613 aa14.67□□□□□ -0.06
COPA-202ENST00000368069 ELL2O00472 640 aaPredicted RBP14.66□□□□□ -0.06
COPA-202ENST00000368069 GSE1Q14687 1217 aa14.66□□□□□ -0.06
COPA-202ENST00000368069 GOLGA6L3A6NEY3 463 aa14.66□□□□□ -0.06
COPA-202ENST00000368069 LMOD3Q0VAK6 560 aa14.66□□□□□ -0.06
COPA-202ENST00000368069 CFAP70Q5T0N1 1121 aa14.66□□□□□ -0.06
COPA-202ENST00000368069 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
COPA-202ENST00000368069 PANK1Q8TE04 598 aa14.64□□□□□ -0.07
COPA-202ENST00000368069 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
COPA-202ENST00000368069 CAMSAP2Q08AD1 1489 aa14.64□□□□□ -0.07
COPA-202ENST00000368069 PTMSP20962 102 aa14.63□□□□□ -0.07
COPA-202ENST00000368069 DZIP1LQ8IYY4 767 aaKnown RBP14.63□□□□□ -0.07
COPA-202ENST00000368069 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms