RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 CAMK2BQ13554 666 aa5.5□□□□□ -1.53
RNU6-1048P-201ENST00000364054 LAPTM4BQ86VI4 370 aa5.5□□□□□ -1.53
RNU6-1048P-201ENST00000364054 SPDYE16A6NNV3 312 aaPredicted RBP5.49□□□□□ -1.53
RNU6-1048P-201ENST00000364054 EMILIN3Q9NT22 766 aa5.49□□□□□ -1.53
RNU6-1048P-201ENST00000364054 RABGEF1Q9UJ41 708 aa5.49□□□□□ -1.53
RNU6-1048P-201ENST00000364054 BHMG1C9JSJ3 638 aaPredicted RBP5.48□□□□□ -1.53
RNU6-1048P-201ENST00000364054 PROX2Q3B8N5 592 aa5.48□□□□□ -1.53
RNU6-1048P-201ENST00000364054 NYAP1Q6ZVC0 841 aa5.48□□□□□ -1.53
RNU6-1048P-201ENST00000364054 PCDHGA10Q9Y5H3 936 aa5.48□□□□□ -1.53
RNU6-1048P-201ENST00000364054 DPYSL4O14531 572 aa5.47□□□□□ -1.53
RNU6-1048P-201ENST00000364054 RGS20O76081 388 aa5.47□□□□□ -1.53
RNU6-1048P-201ENST00000364054 IFFO2Q5TF58 517 aa5.47□□□□□ -1.53
RNU6-1048P-201ENST00000364054 RBM33Q96EV2 1170 aaKnown RBP5.47□□□□□ -1.53
RNU6-1048P-201ENST00000364054 COL9A1P20849 921 aa5.46□□□□□ -1.54
RNU6-1048P-201ENST00000364054 CADPS2Q86UW7 1296 aa5.46□□□□□ -1.54
RNU6-1048P-201ENST00000364054 A0A0G2JS52 829 aa5.45□□□□□ -1.54
RNU6-1048P-201ENST00000364054 BCAMP50895 628 aa5.45□□□□□ -1.54
RNU6-1048P-201ENST00000364054 C6orf132Q5T0Z8 1188 aa5.45□□□□□ -1.54
RNU6-1048P-201ENST00000364054 CERKQ8TCT0 537 aa5.45□□□□□ -1.54
RNU6-1048P-201ENST00000364054 IRX2Q9BZI1 471 aaPredicted RBP5.45□□□□□ -1.54
RNU6-1048P-201ENST00000364054 KIAA1468Q9P260 1216 aa5.45□□□□□ -1.54
RNU6-1048P-201ENST00000364054 E2F4Q16254 413 aa5.44□□□□□ -1.54
RNU6-1048P-201ENST00000364054 PACS2Q86VP3 889 aa5.44□□□□□ -1.54
RNU6-1048P-201ENST00000364054 DDX12PQ92771 950 aa5.44□□□□□ -1.54
RNU6-1048P-201ENST00000364054 SEPT9Q9UHD8 586 aaPredicted RBP5.44□□□□□ -1.54
RNU6-1048P-201ENST00000364054 MAP3K7O43318 606 aa5.43□□□□□ -1.54
RNU6-1048P-201ENST00000364054 NBR1Q14596 966 aa5.43□□□□□ -1.54
RNU6-1048P-201ENST00000364054 PDIA6Q15084 440 aa5.43□□□□□ -1.54
RNU6-1048P-201ENST00000364054 PAXIP1Q6ZW49 1069 aaPredicted RBP5.42□□□□□ -1.54
RNU6-1048P-201ENST00000364054 LRCH3Q96II8 777 aa5.42□□□□□ -1.54
RNU6-1048P-201ENST00000364054 ZFRQ96KR1 1074 aaKnown RBP5.42□□□□□ -1.54
RNU6-1048P-201ENST00000364054 CFAP44Q96MT7 982 aa5.42□□□□□ -1.54
RNU6-1048P-201ENST00000364054 ARIH1Q9Y4X5 557 aaPredicted RBP5.42□□□□□ -1.54
RNU6-1048P-201ENST00000364054 SOWAHBA6NEL2 793 aa5.41□□□□□ -1.54
RNU6-1048P-201ENST00000364054 TRIM6-TRIM34B2RNG4 842 aa5.41□□□□□ -1.54
RNU6-1048P-201ENST00000364054 HDGFP51858 240 aaKnown RBP5.41□□□□□ -1.54
RNU6-1048P-201ENST00000364054 FAM98CQ17RN3 349 aaKnown RBP5.41□□□□□ -1.54
RNU6-1048P-201ENST00000364054 NECTIN2Q92692 538 aa5.41□□□□□ -1.54
RNU6-1048P-201ENST00000364054 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1048P-201ENST00000364054 KCNC4Q03721 635 aa5.4□□□□□ -1.54
RNU6-1048P-201ENST00000364054 EN1Q05925 392 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1048P-201ENST00000364054 WBP1LQ9NX94 342 aa5.4□□□□□ -1.54
RNU6-1048P-201ENST00000364054 HPS5Q9UPZ3 1129 aa5.4□□□□□ -1.54
RNU6-1048P-201ENST00000364054 SLC4A3P48751 1232 aa5.39□□□□□ -1.55
RNU6-1048P-201ENST00000364054 ITGBL1O95965 494 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1048P-201ENST00000364054 RTN4Q9NQC3 1192 aaKnown RBP5.38□□□□□ -1.55
RNU6-1048P-201ENST00000364054 TSR3Q9UJK0 312 aaKnown RBP5.38□□□□□ -1.55
RNU6-1048P-201ENST00000364054 NBPF26B4DH59 902 aa5.37□□□□□ -1.55
RNU6-1048P-201ENST00000364054 RNF40O75150 1001 aa5.37□□□□□ -1.55
RNU6-1048P-201ENST00000364054 PPP4CP60510 307 aa5.37□□□□□ -1.55
RNU6-1048P-201ENST00000364054 GRXCR2A6NFK2 248 aa5.36□□□□□ -1.55
RNU6-1048P-201ENST00000364054 PRSS12P56730 875 aa5.36□□□□□ -1.55
RNU6-1048P-201ENST00000364054 TSR1Q2NL82 804 aaKnown RBP5.36□□□□□ -1.55
RNU6-1048P-201ENST00000364054 RBM27Q9P2N5 1060 aaKnown RBP5.36□□□□□ -1.55
RNU6-1048P-201ENST00000364054 Q6ZNB5 142 aa5.35□□□□□ -1.55
RNU6-1048P-201ENST00000364054 CDCA7LQ96GN5 454 aa5.35□□□□□ -1.55
RNU6-1048P-201ENST00000364054 SMAPO00193 183 aa5.34□□□□□ -1.55
RNU6-1048P-201ENST00000364054 SAMD7Q7Z3H4 446 aa5.34□□□□□ -1.55
RNU6-1048P-201ENST00000364054 P3H3Q8IVL6 736 aa5.33□□□□□ -1.56
RNU6-1048P-201ENST00000364054 ARHGEF1Q92888 912 aaKnown RBP5.33□□□□□ -1.56
RNU6-1048P-201ENST00000364054 TSKSQ9UJT2 592 aa5.33□□□□□ -1.56
RNU6-1048P-201ENST00000364054 PNMA3Q9UL41 463 aa5.33□□□□□ -1.56
RNU6-1048P-201ENST00000364054 PRR14Q9BWN1 585 aa5.32□□□□□ -1.56
RNU6-1048P-201ENST00000364054 TATDN2Q93075 761 aa5.31□□□□□ -1.56
RNU6-1048P-201ENST00000364054 OSBPP22059 807 aa5.3□□□□□ -1.56
RNU6-1048P-201ENST00000364054 SLF2Q8IX21 1173 aa5.3□□□□□ -1.56
RNU6-1048P-201ENST00000364054 LAPTM4AQ15012 233 aa5.29□□□□□ -1.56
RNU6-1048P-201ENST00000364054 NUDT18Q6ZVK8 323 aa5.29□□□□□ -1.56
RNU6-1048P-201ENST00000364054 IL21Q9HBE4 155 aa5.29□□□□□ -1.56
RNU6-1048P-201ENST00000364054 GGCXP38435 758 aa5.28□□□□□ -1.56
RNU6-1048P-201ENST00000364054 MTRQ99707 1265 aa5.28□□□□□ -1.56
RNU6-1048P-201ENST00000364054 CDHR5Q9HBB8 845 aa5.28□□□□□ -1.56
RNU6-1048P-201ENST00000364054 GFRA3O60609 400 aa5.27□□□□□ -1.57
RNU6-1048P-201ENST00000364054 PRKD2Q9BZL6 878 aa5.27□□□□□ -1.57
RNU6-1048P-201ENST00000364054 PRIM1P49642 420 aaKnown RBP5.26□□□□□ -1.57
RNU6-1048P-201ENST00000364054 TJAP1Q5JTD0 557 aa5.26□□□□□ -1.57
RNU6-1048P-201ENST00000364054 FAM198AQ9UFP1 575 aa5.26□□□□□ -1.57
RNU6-1048P-201ENST00000364054 COPS2P61201 443 aa5.25□□□□□ -1.57
RNU6-1048P-201ENST00000364054 SMYD5Q6GMV2 418 aa5.25□□□□□ -1.57
RNU6-1048P-201ENST00000364054 PADI6Q6TGC4 694 aa5.25□□□□□ -1.57
RNU6-1048P-201ENST00000364054 RBM46Q8TBY0 533 aaKnown RBP5.25□□□□□ -1.57
RNU6-1048P-201ENST00000364054 SWT1Q5T5J6 900 aaKnown RBP5.24□□□□□ -1.57
RNU6-1048P-201ENST00000364054 RSPH4AQ5TD94 716 aa5.24□□□□□ -1.57
RNU6-1048P-201ENST00000364054 TTC13Q8NBP0 860 aa5.24□□□□□ -1.57
RNU6-1048P-201ENST00000364054 C3orf80F5H4A9 247 aa5.23□□□□□ -1.57
RNU6-1048P-201ENST00000364054 APLP1P51693 650 aa5.23□□□□□ -1.57
RNU6-1048P-201ENST00000364054 PPP1R18Q6NYC8 613 aa5.23□□□□□ -1.57
RNU6-1048P-201ENST00000364054 ZNF516Q92618 1163 aa5.23□□□□□ -1.57
RNU6-1048P-201ENST00000364054 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.23□□□□□ -1.57
RNU6-1048P-201ENST00000364054 DNAJB2P25686 324 aa5.22□□□□□ -1.57
RNU6-1048P-201ENST00000364054 TRAF7Q6Q0C0 670 aa5.22□□□□□ -1.57
RNU6-1048P-201ENST00000364054 TSHZ2Q9NRE2 1034 aa5.22□□□□□ -1.57
RNU6-1048P-201ENST00000364054 NUTM2FA1L443 756 aa5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 NRG2O14511 850 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 FCHSD2O94868 740 aa5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 KMT5BQ4FZB7 885 aa5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 KCNV2Q8TDN2 545 aa5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 TMUB1Q9BVT8 246 aa5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 NPDC1Q9NQX5 325 aaPredicted RBP5.21□□□□□ -1.58
RNU6-1048P-201ENST00000364054 PDZRN3Q9UPQ7 1066 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms