RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 TMEM151AQ8N4L1 468 aa4.95□□□□□ -1.62
RNU6-228P-201ENST00000362700 GMPR2Q9P2T1 348 aaKnown RBP4.95□□□□□ -1.62
RNU6-228P-201ENST00000362700 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
RNU6-228P-201ENST00000362700 GGCXP38435 758 aa4.94□□□□□ -1.62
RNU6-228P-201ENST00000362700 LAPTM4BQ86VI4 370 aa4.94□□□□□ -1.62
RNU6-228P-201ENST00000362700 ZNF454Q8N9F8 522 aa4.94□□□□□ -1.62
RNU6-228P-201ENST00000362700 TSR3Q9UJK0 312 aaKnown RBP4.94□□□□□ -1.62
RNU6-228P-201ENST00000362700 TBC1D12O60347 775 aa4.93□□□□□ -1.62
RNU6-228P-201ENST00000362700 TJAP1Q5JTD0 557 aa4.93□□□□□ -1.62
RNU6-228P-201ENST00000362700 ZFRQ96KR1 1074 aaKnown RBP4.93□□□□□ -1.62
RNU6-228P-201ENST00000362700 RABGEF1Q9UJ41 708 aa4.93□□□□□ -1.62
RNU6-228P-201ENST00000362700 HPS5Q9UPZ3 1129 aa4.92□□□□□ -1.62
RNU6-228P-201ENST00000362700 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
RNU6-228P-201ENST00000362700 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
RNU6-228P-201ENST00000362700 GDF11O95390 407 aa4.9□□□□□ -1.63
RNU6-228P-201ENST00000362700 CRIPAKQ8N1N5 446 aa4.9□□□□□ -1.63
RNU6-228P-201ENST00000362700 SLC16A10Q8TF71 515 aa4.9□□□□□ -1.63
RNU6-228P-201ENST00000362700 IL21Q9HBE4 155 aa4.9□□□□□ -1.63
RNU6-228P-201ENST00000362700 DACH1Q9UI36 760 aa4.9□□□□□ -1.63
RNU6-228P-201ENST00000362700 GMPRP36959 345 aa4.88□□□□□ -1.63
RNU6-228P-201ENST00000362700 SLC19A1P41440 591 aa4.88□□□□□ -1.63
RNU6-228P-201ENST00000362700 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.88□□□□□ -1.63
RNU6-228P-201ENST00000362700 NLRP6P59044 892 aa4.87□□□□□ -1.63
RNU6-228P-201ENST00000362700 ZNF598Q86UK7 904 aaKnown RBP4.87□□□□□ -1.63
RNU6-228P-201ENST00000362700 MTRQ99707 1265 aa4.87□□□□□ -1.63
RNU6-228P-201ENST00000362700 TNFRSF10AO00220 468 aa4.86□□□□□ -1.63
RNU6-228P-201ENST00000362700 AXIN1O15169 862 aa4.86□□□□□ -1.63
RNU6-228P-201ENST00000362700 GSK3AP49840 483 aa4.86□□□□□ -1.63
RNU6-228P-201ENST00000362700 KLHL34Q8N239 644 aa4.86□□□□□ -1.63
RNU6-228P-201ENST00000362700 LRCH3Q96II8 777 aa4.86□□□□□ -1.63
RNU6-228P-201ENST00000362700 IGHA1P01876 353 aa4.85□□□□□ -1.63
RNU6-228P-201ENST00000362700 TMUB1Q9BVT8 246 aa4.85□□□□□ -1.63
RNU6-228P-201ENST00000362700 RASSF7Q02833 373 aa4.84□□□□□ -1.63
RNU6-228P-201ENST00000362700 SPRYD7Q5W111 196 aa4.84□□□□□ -1.63
RNU6-228P-201ENST00000362700 GPAT2Q6NUI2 795 aa4.84□□□□□ -1.63
RNU6-228P-201ENST00000362700 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
RNU6-228P-201ENST00000362700 IRF7Q92985 503 aa4.83□□□□□ -1.64
RNU6-228P-201ENST00000362700 PPP4CP60510 307 aa4.82□□□□□ -1.64
RNU6-228P-201ENST00000362700 PROX2Q3B8N5 592 aa4.82□□□□□ -1.64
RNU6-228P-201ENST00000362700 ZNF697Q5TEC3 545 aa4.82□□□□□ -1.64
RNU6-228P-201ENST00000362700 PPP1R3GB7ZBB8 358 aa4.81□□□□□ -1.64
RNU6-228P-201ENST00000362700 RNF225M0QZC1 329 aaPredicted RBP4.81□□□□□ -1.64
RNU6-228P-201ENST00000362700 GDF9O60383 454 aa4.81□□□□□ -1.64
RNU6-228P-201ENST00000362700 FOSBP53539 338 aa4.81□□□□□ -1.64
RNU6-228P-201ENST00000362700 ZNF516Q92618 1163 aa4.81□□□□□ -1.64
RNU6-228P-201ENST00000362700 SNRPBP14678 240 aaKnown RBP4.8□□□□□ -1.64
RNU6-228P-201ENST00000362700 CTC1Q2NKJ3 1217 aa4.8□□□□□ -1.64
RNU6-228P-201ENST00000362700 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
RNU6-228P-201ENST00000362700 NKX2-3Q8TAU0 364 aa4.79□□□□□ -1.64
RNU6-228P-201ENST00000362700 SEPT9Q9UHD8 586 aaPredicted RBP4.79□□□□□ -1.64
RNU6-228P-201ENST00000362700 ADAM23O75077 832 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 AVPP01185 164 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 FAM98CQ17RN3 349 aaKnown RBP4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 FBXO22Q8NEZ5 403 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 ZDHHC16Q969W1 377 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 ADAM33Q9BZ11 813 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 SENP2Q9HC62 589 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 KIAA1468Q9P260 1216 aa4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 CIZ1Q9ULV3 898 aaPredicted RBP4.78□□□□□ -1.64
RNU6-228P-201ENST00000362700 Q8N3U1 123 aa4.77□□□□□ -1.65
RNU6-228P-201ENST00000362700 TRIM47Q96LD4 638 aa4.77□□□□□ -1.65
RNU6-228P-201ENST00000362700 PLPP6Q8IY26 295 aa4.76□□□□□ -1.65
RNU6-228P-201ENST00000362700 EMID1Q96A84 441 aaPredicted RBP4.76□□□□□ -1.65
RNU6-228P-201ENST00000362700 SMCPP49901 116 aaPredicted RBP4.75□□□□□ -1.65
RNU6-228P-201ENST00000362700 JPH4Q96JJ6 628 aa4.75□□□□□ -1.65
RNU6-228P-201ENST00000362700 NXF1Q9UBU9 619 aaKnown RBP4.75□□□□□ -1.65
RNU6-228P-201ENST00000362700 FOXK2Q01167 660 aa4.74□□□□□ -1.65
RNU6-228P-201ENST00000362700 DNMT3AQ9Y6K1 912 aaPredicted RBP4.74□□□□□ -1.65
RNU6-228P-201ENST00000362700 FOXK1P85037 733 aa4.73□□□□□ -1.65
RNU6-228P-201ENST00000362700 RNF223E7ERA6 249 aa4.72□□□□□ -1.65
RNU6-228P-201ENST00000362700 NPAS3Q8IXF0 933 aa4.72□□□□□ -1.65
RNU6-228P-201ENST00000362700 KIFC2Q96AC6 838 aa4.72□□□□□ -1.65
RNU6-228P-201ENST00000362700 ATP13A2Q9NQ11 1180 aa4.72□□□□□ -1.65
RNU6-228P-201ENST00000362700 ONECUT3O60422 494 aaPredicted RBP4.71□□□□□ -1.66
RNU6-228P-201ENST00000362700 LMOD2Q6P5Q4 547 aa4.71□□□□□ -1.66
RNU6-228P-201ENST00000362700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.7□□□□□ -1.66
RNU6-228P-201ENST00000362700 ZFP91Q96JP5 570 aaPredicted RBP4.7□□□□□ -1.66
RNU6-228P-201ENST00000362700 COL9A1P20849 921 aa4.69□□□□□ -1.66
RNU6-228P-201ENST00000362700 FOXC1Q12948 553 aa4.69□□□□□ -1.66
RNU6-228P-201ENST00000362700 LIAT1Q6ZQX7 453 aa4.69□□□□□ -1.66
RNU6-228P-201ENST00000362700 ANKLE1Q8NAG6 615 aa4.68□□□□□ -1.66
RNU6-228P-201ENST00000362700 UPF1Q92900 1129 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU6-228P-201ENST00000362700 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
RNU6-228P-201ENST00000362700 OXER1Q8TDS5 423 aa4.67□□□□□ -1.66
RNU6-228P-201ENST00000362700 H3BM21 787 aa4.66□□□□□ -1.66
RNU6-228P-201ENST00000362700 ERBB4Q15303 1308 aa4.66□□□□□ -1.66
RNU6-228P-201ENST00000362700 VEGFBP49765 207 aa4.65□□□□□ -1.67
RNU6-228P-201ENST00000362700 COPS2P61201 443 aa4.65□□□□□ -1.67
RNU6-228P-201ENST00000362700 CYP4X1Q8N118 509 aa4.65□□□□□ -1.67
RNU6-228P-201ENST00000362700 MFRPQ9BY79 579 aa4.65□□□□□ -1.67
RNU6-228P-201ENST00000362700 PKD2L1Q9P0L9 805 aa4.65□□□□□ -1.67
RNU6-228P-201ENST00000362700 TRIM41Q8WV44 630 aa4.64□□□□□ -1.67
RNU6-228P-201ENST00000362700 VGFO15240 615 aaPredicted RBP4.63□□□□□ -1.67
RNU6-228P-201ENST00000362700 ZPR1O75312 459 aa4.63□□□□□ -1.67
RNU6-228P-201ENST00000362700 DSG2Q14126 1118 aa4.63□□□□□ -1.67
RNU6-228P-201ENST00000362700 TOR4AQ9NXH8 423 aa4.63□□□□□ -1.67
RNU6-228P-201ENST00000362700 TRIM6-TRIM34B2RNG4 842 aa4.62□□□□□ -1.67
RNU6-228P-201ENST00000362700 RIOK3O14730 519 aaKnown RBP4.62□□□□□ -1.67
RNU6-228P-201ENST00000362700 MSTNO14793 375 aa4.61□□□□□ -1.67
RNU6-228P-201ENST00000362700 APLP1P51693 650 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms